BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005135
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32617.3| unnamed protein product [Vitis vinifera]              431   e-118
ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   431   e-118
ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   422   e-116
ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   410   e-112
ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   409   e-112

>emb|CBI32617.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  431 bits (1109), Expect = e-118
 Identities = 232/345 (67%), Positives = 259/345 (75%)
 Frame = +2

Query: 56   MAEKKKRRRTDPTSDDEDERQLIPFKKRLKSDPDILSILKKLTDSHRSTTSTHKALSLND 235
            MA+KKKRRRTDP+  D+   Q +PF+  LKSD  IL  LK L  S  S  +T   L+L+D
Sbjct: 44   MADKKKRRRTDPSDSDQ---QHLPFRNSLKSDEIILQTLKDLCSSSSSDGATG-TLTLSD 99

Query: 236  LGLSSTCKEVADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRSNANQLYVPELDRI 415
            LGL+STC+EVADL L+SVQ  IE ++ R+T SIL+G GFSF VP+RS+ANQLYVPELDRI
Sbjct: 100  LGLASTCREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRI 159

Query: 416  VLKDKTSTRPYASVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKLFXXXXXXX 595
            VLKDK+S RP+A+VSTVRK+A+TTRILQL+HQLCTK+IHVTKRDLFYTDVKLF       
Sbjct: 160  VLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSD 219

Query: 596  XXXXXXXCMLGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 775
                   CMLGCTRSSLNV+ASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG
Sbjct: 220  SVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 279

Query: 776  DMQSDALFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPDVATRLFLK 955
            DMQSDALF                                         QPDVATRLFL+
Sbjct: 280  DMQSDALF----------ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 329

Query: 956  KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1090
            KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 330  KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 374


>ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
          Length = 420

 Score =  431 bits (1109), Expect = e-118
 Identities = 232/345 (67%), Positives = 259/345 (75%)
 Frame = +2

Query: 56   MAEKKKRRRTDPTSDDEDERQLIPFKKRLKSDPDILSILKKLTDSHRSTTSTHKALSLND 235
            MA+KKKRRRTDP+  D+   Q +PF+  LKSD  IL  LK L  S  S  +T   L+L+D
Sbjct: 1    MADKKKRRRTDPSDSDQ---QHLPFRNSLKSDEIILQTLKDLCSSSSSDGATG-TLTLSD 56

Query: 236  LGLSSTCKEVADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRSNANQLYVPELDRI 415
            LGL+STC+EVADL L+SVQ  IE ++ R+T SIL+G GFSF VP+RS+ANQLYVPELDRI
Sbjct: 57   LGLASTCREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRI 116

Query: 416  VLKDKTSTRPYASVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKLFXXXXXXX 595
            VLKDK+S RP+A+VSTVRK+A+TTRILQL+HQLCTK+IHVTKRDLFYTDVKLF       
Sbjct: 117  VLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSD 176

Query: 596  XXXXXXXCMLGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 775
                   CMLGCTRSSLNV+ASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG
Sbjct: 177  SVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 236

Query: 776  DMQSDALFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPDVATRLFLK 955
            DMQSDALF                                         QPDVATRLFL+
Sbjct: 237  DMQSDALF----------ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 286

Query: 956  KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1090
            KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 287  KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 331


>ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
            gi|449521501|ref|XP_004167768.1| PREDICTED: DNA
            topoisomerase 6 subunit A-like [Cucumis sativus]
          Length = 420

 Score =  422 bits (1085), Expect = e-116
 Identities = 223/345 (64%), Positives = 262/345 (75%)
 Frame = +2

Query: 56   MAEKKKRRRTDPTSDDEDERQLIPFKKRLKSDPDILSILKKLTDSHRSTTSTHKALSLND 235
            MA+K+KRRR++  S+DE +   +PFK +LK D  IL ILK+L+D+  +++S+  + +L+D
Sbjct: 1    MADKRKRRRSELNSEDEAQ---LPFKNKLKPDSFILQILKELSDASTASSSS-SSKTLDD 56

Query: 236  LGLSSTCKEVADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRSNANQLYVPELDRI 415
            LGLSS+C+EV DL L+SVQ  IE ++ +I +SIL+GNGF+F+VP+RS ANQLYVPELDRI
Sbjct: 57   LGLSSSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRI 116

Query: 416  VLKDKTSTRPYASVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKLFXXXXXXX 595
            VLKDKT+ RPYA++STVRK+ ITTRILQLVHQLC K+IHVTKRDLFYTDVKLF       
Sbjct: 117  VLKDKTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSD 176

Query: 596  XXXXXXXCMLGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 775
                   C+LGCTRSSLNV+A+EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG
Sbjct: 177  SVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 236

Query: 776  DMQSDALFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPDVATRLFLK 955
            DMQSDALF                                         QPDVATRLFL+
Sbjct: 237  DMQSDALF----------ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 286

Query: 956  KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1090
            KMK ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 287  KMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 331


>ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 417

 Score =  410 bits (1055), Expect = e-112
 Identities = 220/345 (63%), Positives = 250/345 (72%)
 Frame = +2

Query: 56   MAEKKKRRRTDPTSDDEDERQLIPFKKRLKSDPDILSILKKLTDSHRSTTSTHKALSLND 235
            MA+ KKRRR DP  D+      +PFK +LK D  I+  LK+ + S  S++S  + L+L D
Sbjct: 1    MADNKKRRRKDPAGDE------LPFKNKLKPDSAIMETLKQFSASS-SSSSVSQTLTLQD 53

Query: 236  LGLSSTCKEVADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRSNANQLYVPELDRI 415
            L +   C+EVADL L+SVQ  IE ++ RI  SIL+G+GFSF+VP+RS ANQLYVPELDRI
Sbjct: 54   LSIPFRCREVADLSLSSVQSNIESLILRIAHSILSGHGFSFDVPSRSAANQLYVPELDRI 113

Query: 416  VLKDKTSTRPYASVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKLFXXXXXXX 595
            VLKDK+S RP+A++STVRK+AIT RILQL+HQLC K IHVTKRDLFYTDVKLF       
Sbjct: 114  VLKDKSSLRPFANISTVRKSAITARILQLIHQLCIKGIHVTKRDLFYTDVKLFQDQIQSD 173

Query: 596  XXXXXXXCMLGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 775
                   CMLGCTRSSLNVVA+EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG
Sbjct: 174  AVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 233

Query: 776  DMQSDALFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPDVATRLFLK 955
            DMQSDALF                                         QPDV+TRLFL+
Sbjct: 234  DMQSDALF----------ILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTRLFLR 283

Query: 956  KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1090
            KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 284  KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 328


>ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 419

 Score =  409 bits (1051), Expect = e-112
 Identities = 220/346 (63%), Positives = 248/346 (71%), Gaps = 1/346 (0%)
 Frame = +2

Query: 56   MAEKKKRRRTDPTSDDEDERQLIPFKKRLKSDPDILSILKKLT-DSHRSTTSTHKALSLN 232
            MA+ KKRRR DP  D+      +PFK +LK D  I+  LK+ +  S  S+ S  + L+L 
Sbjct: 1    MADNKKRRRKDPAGDE------LPFKNKLKPDSAIMETLKQFSASSSSSSASVSQTLTLQ 54

Query: 233  DLGLSSTCKEVADLDLTSVQHEIEQIVFRITKSILAGNGFSFEVPTRSNANQLYVPELDR 412
            DL L   C+EVADL L+SVQ  IE ++ RI  SIL+G+GFSF+VP+RS ANQLYVPELDR
Sbjct: 55   DLSLPFRCREVADLSLSSVQSNIESLILRIAHSILSGHGFSFDVPSRSAANQLYVPELDR 114

Query: 413  IVLKDKTSTRPYASVSTVRKTAITTRILQLVHQLCTKSIHVTKRDLFYTDVKLFXXXXXX 592
            IVLKDK+S RP+A++STVRK+AIT RILQL+HQLC K IHVTKRDLFYTDVKLF      
Sbjct: 115  IVLKDKSSLRPFANISTVRKSAITARILQLIHQLCLKGIHVTKRDLFYTDVKLFQDQIQS 174

Query: 593  XXXXXXXXCMLGCTRSSLNVVASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRV 772
                    CMLGCTRSSLNVVA+EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRV
Sbjct: 175  DAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRV 234

Query: 773  GDMQSDALFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPDVATRLFL 952
            GDMQSDALF                                         QPDV+TRLFL
Sbjct: 235  GDMQSDALF----------ILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTRLFL 284

Query: 953  KKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSSNLTTPD 1090
            +KMK ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS+NLTTPD
Sbjct: 285  RKMKIELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 330