BLASTX nr result
ID: Cimicifuga21_contig00005132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005132
(3016 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 1175 0.0
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 1168 0.0
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 1111 0.0
ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated... 993 0.0
ref|XP_003601650.1| Small subunit processome component-like prot... 972 0.0
>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
Length = 3196
Score = 1175 bits (3040), Expect = 0.0
Identities = 606/893 (67%), Positives = 718/893 (80%), Gaps = 2/893 (0%)
Frame = -2
Query: 3012 MELQLPSIIHRICNFLKNRLESVRDEARHALAACSKELGLEYLQFIVKVLRATLKRGYEL 2833
ME QL SIIHRI NFL+NRLESVRD+AR ALAAC KELGLEYLQFIV VLRATLKRGYEL
Sbjct: 1280 MESQLSSIIHRISNFLRNRLESVRDDARSALAACLKELGLEYLQFIVSVLRATLKRGYEL 1339
Query: 2832 HVLGYTLNFILSKALLSPSTGRLDYCLEELLSVAENDILGDVAEEKEVEKIASKMKETKK 2653
HVLGYTL+FILSK L P +G+LDYCLE+LLS+ +NDILGDVAEEKEVEKIASKMKET+K
Sbjct: 1340 HVLGYTLHFILSKCL--PISGKLDYCLEDLLSIVKNDILGDVAEEKEVEKIASKMKETRK 1397
Query: 2652 PKSFGTLKLIAQSITFKTHALKLLSPVKAHLHKHLTPKLKAKLEKMLTSIAEGIECNPSV 2473
KSF TLKLIAQSI FK+HALKLLSPV AHL HLTPK+K LE ML IA GIECNPSV
Sbjct: 1398 RKSFETLKLIAQSIMFKSHALKLLSPVIAHLQNHLTPKVKLNLETMLNHIAAGIECNPSV 1457
Query: 2472 DHTDLFVFVYGLIEDGIVEENLQGRDPPTAKSSKQLSNGVSDKRKSSPWIIGYKSQSSHL 2293
D TDLF+FVYGL+EDGI +EN +G +++++ K+ S ++G +S +HL
Sbjct: 1458 DQTDLFIFVYGLVEDGISKENCRGEHSAVMETNEKRKTDEPRKKVSLGKVVGSESHYAHL 1517
Query: 2292 VTVFALRVLHNHLKSMKMDKKDEQMLSMLDPFVKLLGDCLRSKFEDILSAALRCLGPLIR 2113
+TVFAL +LHN +K+MK++KKD Q+LSMLDPFVK LG CL SK+EDILSAALRC+ L+R
Sbjct: 1518 ITVFALGLLHNRIKNMKLNKKDGQLLSMLDPFVKQLGSCLSSKYEDILSAALRCIALLVR 1577
Query: 2112 LPLPSLEVHADNIKTLLLDIAQKSGNTSSPLLQSCLNLLTVLLRSTKITLSSDQLHMLIQ 1933
LPLP+LE AD IK+ LLDIAQ S N +SPL+QSCL+LLT LLRSTKITLS+DQLH+LIQ
Sbjct: 1578 LPLPALETQADGIKSALLDIAQSSVNANSPLMQSCLSLLTALLRSTKITLSTDQLHLLIQ 1637
Query: 1932 FPLFVDLERNPSFLALLLLKAIVRRKLVVPEIFDVVTRVAELMVTSQVEPIRKKCSQILL 1753
FPLFVDLERNPSF+AL LLKAI+ RKLVV EI+DVVTRVAELMVTSQVEPIRKKCSQILL
Sbjct: 1638 FPLFVDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILL 1697
Query: 1752 RFLLDYPLSHKRLQQHLDFLLSNLSYEHSSGREAVLEMLHAIIIKFPKHTVDEQAQTFFL 1573
+FLLDY LS KRLQQHLDFLL+NL YEHS+GRE VLEM+H IIIKFPK VDEQ+QT F+
Sbjct: 1698 QFLLDYHLSEKRLQQHLDFLLANLRYEHSTGRETVLEMIHTIIIKFPKSIVDEQSQTLFV 1757
Query: 1572 HLVVCLANDQDSKVRSMVGAALKLLIGRTSQSALNSILEYSLSWYVGEKKNLWSAAAQXX 1393
HLVVCL NDQD+KVRSM+GAA+KLLIGR S +L+ I+EYSLSWY+GEK+ LWSAAAQ
Sbjct: 1758 HLVVCLTNDQDNKVRSMIGAAIKLLIGRISPHSLHPIIEYSLSWYLGEKQQLWSAAAQVL 1817
Query: 1392 XXXXXXXXXGFQRHINNALPVMKSILKSALPIVVGEQPKYSNEAMIPFWREAYYSXXXXX 1213
GFQRHI + LPVM+SIL+ A+ Q SN+ IP W+EAYYS
Sbjct: 1818 GFMIEVMKKGFQRHIESVLPVMRSILRLAVKCGTDNQLDLSNDVAIPLWKEAYYSLVMLE 1877
Query: 1212 XXXXXXXXLYFEKGIEDIWDAICEFLLYPHMWIRNISSRLVASYFAMVSEASRTNSEKLK 1033
L ++ +EDIW+ IC+FLL+PHMW+RNISSRLVA YF V+EA+R +EK
Sbjct: 1878 KMLQQFHELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEK-S 1936
Query: 1032 LGAFLLMKPSRLFSIAVSLCCQLKAQLTEDATNIVITQNLVFAICGVHSLVGQSKFMGLQ 853
+ F L++PSRLF IAVSLCCQLKAQL +DA + +ITQNLVFAICGVHS VGQ + +
Sbjct: 1937 IETFSLVRPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPH 1996
Query: 852 EFWSALEVPEQGHFIKAFQLLGSKKGTYILASLSGEKVQNV--EASVEDLQSLLVSPVLK 679
+FWSA+E EQ HF+KAFQLL S+KG I S ++ N+ + + EDL+ LLVS +LK
Sbjct: 1997 QFWSAIEQHEQEHFLKAFQLLDSRKGRSIFESFMSSRIHNLNDQGNNEDLRHLLVSSLLK 2056
Query: 678 RLGKVALQMENVQMKIVFNCFRTISSQISQEGCQRYATDLLIPLYKICEGFAGKVIADDV 499
R+GK+ALQME +QMKIVFN FRTIS+ I QE CQ YA +L+PLYK+CEGF+GKVI+D+V
Sbjct: 2057 RMGKIALQMEAIQMKIVFNSFRTISTTIGQEECQHYAFQMLLPLYKVCEGFSGKVISDEV 2116
Query: 498 KQLAEEVRESIKGILGVENFVKVYNEIRKNLKAKRDKRKHQEKLMAVINPMRN 340
KQLA+EV ESI+ LG++NFV+VY+ IRK LKAKRDKRK +EKLMAV+NPMRN
Sbjct: 2117 KQLAQEVSESIRDTLGIQNFVQVYSHIRKKLKAKRDKRKQEEKLMAVVNPMRN 2169
>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
Length = 2461
Score = 1168 bits (3022), Expect = 0.0
Identities = 605/893 (67%), Positives = 718/893 (80%), Gaps = 2/893 (0%)
Frame = -2
Query: 3012 MELQLPSIIHRICNFLKNRLESVRDEARHALAACSKELGLEYLQFIVKVLRATLKRGYEL 2833
ME QL SIIHRI NFL+NRLESVRD+AR ALAAC KELGLEYLQFIV VLRATLKRGYEL
Sbjct: 1544 MESQLSSIIHRISNFLRNRLESVRDDARSALAACLKELGLEYLQFIVSVLRATLKRGYEL 1603
Query: 2832 HVLGYTLNFILSKALLSPSTGRLDYCLEELLSVAENDILGDVAEEKEVEKIASKMKETKK 2653
HVLGYTL+FILSK L P +G+LDYCLE+LLS+ +NDILGDVAEEKEVEKIASKMKET+K
Sbjct: 1604 HVLGYTLHFILSKCL--PISGKLDYCLEDLLSIVKNDILGDVAEEKEVEKIASKMKETRK 1661
Query: 2652 PKSFGTLKLIAQSITFKTHALKLLSPVKAHLHKHLTPKLKAKLEKMLTSIAEGIECNPSV 2473
KSF TLKLIAQSI FK+HALKLLSPV AHL HLTPK+K LE ML IA GIECNPSV
Sbjct: 1662 RKSFETLKLIAQSIMFKSHALKLLSPVIAHLQNHLTPKVKLNLETMLNHIAAGIECNPSV 1721
Query: 2472 DHTDLFVFVYGLIEDGIVEENLQGRDPPTAKSSKQLSNGVSDKRKSSPWIIGYKSQSSHL 2293
D TDLF+FVYGL+EDGI +EN +G +++++ K+ S ++G +S +HL
Sbjct: 1722 DQTDLFIFVYGLVEDGISKENCRGEHSAVMETNEKRKTDEPRKKVSLGKVVGSESHYAHL 1781
Query: 2292 VTVFALRVLHNHLKSMKMDKKDEQMLSMLDPFVKLLGDCLRSKFEDILSAALRCLGPLIR 2113
+TVFAL +LHN +K+MK++KKD Q+LSMLDPFVK LG CL SK+EDILSAALRC+ L+R
Sbjct: 1782 ITVFALGLLHNRIKNMKLNKKDGQLLSMLDPFVKQLGSCLSSKYEDILSAALRCIALLVR 1841
Query: 2112 LPLPSLEVHADNIKTLLLDIAQKSGNTSSPLLQSCLNLLTVLLRSTKITLSSDQLHMLIQ 1933
LPLP+LE AD IK+ LLDIAQ S N +SPL+QSCL+LLT LLRSTKITLS+DQLH+LIQ
Sbjct: 1842 LPLPALETQADGIKSALLDIAQSSVNANSPLMQSCLSLLTALLRSTKITLSTDQLHLLIQ 1901
Query: 1932 FPLFVDLERNPSFLALLLLKAIVRRKLVVPEIFDVVTRVAELMVTSQVEPIRKKCSQILL 1753
FPLFVDLERNPSF+AL LLKAI+ RKLVV EI+DVVTRVAELMVTSQVEPIRKKCSQILL
Sbjct: 1902 FPLFVDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILL 1961
Query: 1752 RFLLDYPLSHKRLQQHLDFLLSNLSYEHSSGREAVLEMLHAIIIKFPKHTVDEQAQTFFL 1573
+FLLDY LS KRLQQHLDFLL+NL +HS+GREAVLEM+H IIIKFPK VDEQ+QT F+
Sbjct: 1962 QFLLDYHLSEKRLQQHLDFLLANLR-QHSTGREAVLEMIHTIIIKFPKSIVDEQSQTLFV 2020
Query: 1572 HLVVCLANDQDSKVRSMVGAALKLLIGRTSQSALNSILEYSLSWYVGEKKNLWSAAAQXX 1393
HLVVCL NDQD+KVRSM+GAA+KLLIGR S +L+ I+EYSLSWY+GEK+ LWSAAAQ
Sbjct: 2021 HLVVCLTNDQDNKVRSMIGAAIKLLIGRISPHSLHPIIEYSLSWYLGEKQQLWSAAAQVL 2080
Query: 1392 XXXXXXXXXGFQRHINNALPVMKSILKSALPIVVGEQPKYSNEAMIPFWREAYYSXXXXX 1213
GFQRHI + LPVM+SIL+ A+ Q SN+ IP W+EAYYS
Sbjct: 2081 GFMIEVMKKGFQRHIESVLPVMRSILRLAVKCGTDNQLDLSNDVAIPLWKEAYYSLVMLE 2140
Query: 1212 XXXXXXXXLYFEKGIEDIWDAICEFLLYPHMWIRNISSRLVASYFAMVSEASRTNSEKLK 1033
L ++ +EDIW+ IC+FLL+PHMW+RNISSRLVA YF V+EA+R +EK
Sbjct: 2141 KMLQQFHELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEK-S 2199
Query: 1032 LGAFLLMKPSRLFSIAVSLCCQLKAQLTEDATNIVITQNLVFAICGVHSLVGQSKFMGLQ 853
+ F L++PSRLF IAVSLCCQLKAQL +DA + +ITQNLVFAICGVHS VGQ + +
Sbjct: 2200 IETFSLVRPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPH 2259
Query: 852 EFWSALEVPEQGHFIKAFQLLGSKKGTYILASLSGEKVQNV--EASVEDLQSLLVSPVLK 679
+FWSA+E EQ HF+KAFQLL S+KG I S ++ N+ + + EDL+ LLVS +LK
Sbjct: 2260 QFWSAIEQHEQEHFLKAFQLLDSRKGRSIFESFMSSRIHNLNDQGNNEDLRHLLVSSLLK 2319
Query: 678 RLGKVALQMENVQMKIVFNCFRTISSQISQEGCQRYATDLLIPLYKICEGFAGKVIADDV 499
R+GK+ALQME +QMKIVFN FRTIS+ I QE CQ YA +L+PLYK+CEGF+GKVI+D+V
Sbjct: 2320 RMGKIALQMEAIQMKIVFNSFRTISTTIGQEECQHYAFQMLLPLYKVCEGFSGKVISDEV 2379
Query: 498 KQLAEEVRESIKGILGVENFVKVYNEIRKNLKAKRDKRKHQEKLMAVINPMRN 340
KQLA+EV ESI+ LG++NFV+VY+ IRK LKAKRDKRK +EKLMAV+NPMRN
Sbjct: 2380 KQLAQEVSESIRDTLGIQNFVQVYSHIRKKLKAKRDKRKQEEKLMAVVNPMRN 2432
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 1111 bits (2874), Expect = 0.0
Identities = 582/893 (65%), Positives = 695/893 (77%), Gaps = 2/893 (0%)
Frame = -2
Query: 3012 MELQLPSIIHRICNFLKNRLESVRDEARHALAACSKELGLEYLQFIVKVLRATLKRGYEL 2833
ME QL SIIHRI NFL+NRLESVRD+AR ALAAC KELGLEYLQFIV VLRATLKRGYEL
Sbjct: 1737 MESQLSSIIHRISNFLRNRLESVRDDARSALAACLKELGLEYLQFIVSVLRATLKRGYEL 1796
Query: 2832 HVLGYTLNFILSKALLSPSTGRLDYCLEELLSVAENDILGDVAEEKEVEKIASKMKETKK 2653
HVLGYTL+FILSK L P +G+LDYCLE+LLS+ +NDILGDVAEEKEVEKIASKMKET+K
Sbjct: 1797 HVLGYTLHFILSKCL--PISGKLDYCLEDLLSIVKNDILGDVAEEKEVEKIASKMKETRK 1854
Query: 2652 PKSFGTLKLIAQSITFKTHALKLLSPVKAHLHKHLTPKLKAKLEKMLTSIAEGIECNPSV 2473
KSF TLKLIAQSI FK+HALKLLSPV AHL HLTPK+K LE ML IA GIECNPSV
Sbjct: 1855 RKSFETLKLIAQSIMFKSHALKLLSPVIAHLQNHLTPKVKLNLETMLNHIAAGIECNPSV 1914
Query: 2472 DHTDLFVFVYGLIEDGIVEENLQGRDPPTAKSSKQLSNGVSDKRKSSPWIIGYKSQSSHL 2293
D TDLF+FVYGL+EDGI +EN +G +++++ K+ S ++G +S +HL
Sbjct: 1915 DQTDLFIFVYGLVEDGISKENCRGEHSAVMETNEKRKTDEPRKKVSLGKVVGSESHYAHL 1974
Query: 2292 VTVFALRVLHNHLKSMKMDKKDEQMLSMLDPFVKLLGDCLRSKFEDILSAALRCLGPLIR 2113
+TVFAL +LHN +K+MK++KKD Q+LS+ C+ L+R
Sbjct: 1975 ITVFALGLLHNRIKNMKLNKKDGQLLSI-------------------------CIALLVR 2009
Query: 2112 LPLPSLEVHADNIKTLLLDIAQKSGNTSSPLLQSCLNLLTVLLRSTKITLSSDQLHMLIQ 1933
LPLP+LE AD IK+ LLDIAQ S N +SPL+QSCL+LLT LLRSTKITLS+DQLH+LIQ
Sbjct: 2010 LPLPALETQADGIKSALLDIAQSSVNANSPLMQSCLSLLTALLRSTKITLSTDQLHLLIQ 2069
Query: 1932 FPLFVDLERNPSFLALLLLKAIVRRKLVVPEIFDVVTRVAELMVTSQVEPIRKKCSQILL 1753
FPLFVDLERNPSF+AL LLKAI+ RKLVV EI+DVVTRVAELMVTSQVEPIRKKCSQILL
Sbjct: 2070 FPLFVDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILL 2129
Query: 1752 RFLLDYPLSHKRLQQHLDFLLSNLSYEHSSGREAVLEMLHAIIIKFPKHTVDEQAQTFFL 1573
+FLLDY LS KRLQQHLDFLL+NL +HS+GRE VLEM+H IIIKFPK VDEQ+QT F+
Sbjct: 2130 QFLLDYHLSEKRLQQHLDFLLANLR-QHSTGRETVLEMIHTIIIKFPKSIVDEQSQTLFV 2188
Query: 1572 HLVVCLANDQDSKVRSMVGAALKLLIGRTSQSALNSILEYSLSWYVGEKKNLWSAAAQXX 1393
HLVVCL NDQD+KVRSM+GAA+KLLIGR S +L+ I+EYSLSWY+GEK+ LWSAAAQ
Sbjct: 2189 HLVVCLTNDQDNKVRSMIGAAIKLLIGRISPHSLHPIIEYSLSWYLGEKQQLWSAAAQVL 2248
Query: 1392 XXXXXXXXXGFQRHINNALPVMKSILKSALPIVVGEQPKYSNEAMIPFWREAYYSXXXXX 1213
GFQRHI + LPVM+SIL+ A+ Q SN+ IP W+EAYYS
Sbjct: 2249 GFMIEVMKKGFQRHIESVLPVMRSILRLAVKCGTDNQLDLSNDVAIPLWKEAYYSLVMLE 2308
Query: 1212 XXXXXXXXLYFEKGIEDIWDAICEFLLYPHMWIRNISSRLVASYFAMVSEASRTNSEKLK 1033
L ++ +EDIW+ IC+FLL+PHMW+RNISSRLVA YF V+EA+R +EK
Sbjct: 2309 KMLQQFHELCLQRELEDIWEVICDFLLHPHMWLRNISSRLVAFYFTAVNEANREKNEK-S 2367
Query: 1032 LGAFLLMKPSRLFSIAVSLCCQLKAQLTEDATNIVITQNLVFAICGVHSLVGQSKFMGLQ 853
+ F L++PSRLF IAVSLCCQLKAQL +DA + +ITQNLVFAICGVHS VGQ + +
Sbjct: 2368 IETFSLVRPSRLFMIAVSLCCQLKAQLADDAASNLITQNLVFAICGVHSFVGQKEHVDPH 2427
Query: 852 EFWSALEVPEQGHFIKAFQLLGSKKGTYILASLSGEKVQNV--EASVEDLQSLLVSPVLK 679
+FWSA+E EQ HF+KAFQLL S+KG I S ++ N+ + + EDL+ LLVS +LK
Sbjct: 2428 QFWSAIEQHEQEHFLKAFQLLDSRKGRSIFESFMSSRIHNLNDQGNNEDLRHLLVSSLLK 2487
Query: 678 RLGKVALQMENVQMKIVFNCFRTISSQISQEGCQRYATDLLIPLYKICEGFAGKVIADDV 499
R+GK+ALQME +QMKIVFN FRTIS+ I QE CQ YA +L+PLYK+CEGF+GKVI+D+V
Sbjct: 2488 RMGKIALQMEAIQMKIVFNSFRTISTTIGQEECQHYAFQMLLPLYKVCEGFSGKVISDEV 2547
Query: 498 KQLAEEVRESIKGILGVENFVKVYNEIRKNLKAKRDKRKHQEKLMAVINPMRN 340
KQLA+EV ESI+ LG++NFV+VY+ IRK LKAKRDKRK +EKLMAV+NPMRN
Sbjct: 2548 KQLAQEVSESIRDTLGIQNFVQVYSHIRKKLKAKRDKRKQEEKLMAVVNPMRN 2600
>ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine
max]
Length = 2653
Score = 993 bits (2568), Expect = 0.0
Identities = 525/903 (58%), Positives = 656/903 (72%), Gaps = 12/903 (1%)
Frame = -2
Query: 3012 MELQLPSIIHRICNFLKNRLESVRDEARHALAACSKELGLEYLQFIVKVLRATLKRGYEL 2833
M+L LP+I+HRI NFLK+ LES+RDEAR ALA C KELGLEYLQFI+KVL++TL+RGYEL
Sbjct: 1760 MDLYLPTIVHRISNFLKSHLESIRDEARSALATCLKELGLEYLQFILKVLQSTLRRGYEL 1819
Query: 2832 HVLGYTLNFILSKALLSPSTGRLDYCLEELLSVAENDILGDVAEEKEVEKIASKMKETKK 2653
HVLGYTLNFILSK L SP G++DYCLE+LLSV ENDILGDVAE+KEVEKIASKMKET++
Sbjct: 1820 HVLGYTLNFILSKCLSSPVAGKIDYCLEDLLSVIENDILGDVAEQKEVEKIASKMKETRR 1879
Query: 2652 PKSFGTLKLIAQSITFKTHALKLLSPVKAHLHKHLTPKLKAKLEKMLTSIAEGIECNPSV 2473
KSF +LKL+AQ++TFK++ALKLL+PV AHL KH+TP +K KLE ML IA GIE NPSV
Sbjct: 1880 KKSFESLKLVAQNVTFKSYALKLLAPVTAHLKKHITPNVKGKLENMLQHIATGIESNPSV 1939
Query: 2472 DHTDLFVFVYGLIEDGIVEE---------NLQGRDPPTAKSSKQLSNGVSDKRKSSPWII 2320
D TDLF+FVYG+IEDG+ +E L+G+D + ++ KR S+ ++
Sbjct: 1940 DQTDLFIFVYGIIEDGLNDEIGWHENKLLKLEGKD-----------SRINAKRISTGHVV 1988
Query: 2319 GYKSQSSHLVTVFALRVLHNHLKSMKMDKKDEQMLSMLDPFVKLLGDCLRSKFEDILSAA 2140
SHL+TVF LR+ H +KSMK D KDE LS
Sbjct: 1989 ANGLLCSHLITVFGLRIFHKRMKSMKQDVKDENTLS------------------------ 2024
Query: 2139 LRCLGPLIRLPLPSLEVHADNIKTLLLDIAQKSGNTSSPLLQSCLNLLTVLLRSTKITLS 1960
CL L++LPLPSL+ HA+ +K LLDIA S N+ SPL+QSCL LLTVLLR+TKI+L+
Sbjct: 2025 -GCLAILVKLPLPSLQQHAERVKAALLDIAHGSVNSISPLMQSCLTLLTVLLRNTKISLT 2083
Query: 1959 SDQLHMLIQFPLFVDLERNPSFLALLLLKAIVRRKLVVPEIFDVVTRVAELMVTSQVEPI 1780
SDQ+ +LI P+F+DLE+NPS +AL LLK IV RK+VVPEI+D+VT VAELMVTSQ+EP+
Sbjct: 2084 SDQISLLIHLPIFLDLEKNPSLVALSLLKGIVSRKMVVPEIYDLVTTVAELMVTSQMEPV 2143
Query: 1779 RKKCSQILLRFLLDYPLSHKRLQQHLDFLLSNLSYEHSSGREAVLEMLHAIIIKFPKHTV 1600
RKKCS+ILL+FLLDY LS KRLQQHLDFLLSNL YEHS+GRE+VLEM+HAII+KFP+ +
Sbjct: 2144 RKKCSKILLQFLLDYRLSEKRLQQHLDFLLSNLRYEHSTGRESVLEMIHAIIVKFPRSVL 2203
Query: 1599 DEQAQTFFLHLVVCLANDQDSKVRSMVGAALKLLIGRTSQSALNSILEYSLSWYVGEKKN 1420
DEQ+ F+HLV CLAND D+ VRSM GAA+K LI S ++L SILEY+LSWY+G K+
Sbjct: 2204 DEQSHILFVHLVACLANDNDNIVRSMSGAAIKKLISSVSPNSLKSILEYALSWYLGGKQQ 2263
Query: 1419 LWSAAAQXXXXXXXXXXXGFQRHINNALPVMKSILKSALPIVVGEQPKYSNEAMIPFWRE 1240
LW AAAQ GFQ HIN LPV K IL SA+ V Q +S E+ IP W+E
Sbjct: 2264 LWGAAAQVLGLLIEVKKKGFQEHINCILPVTKHILHSAVDAVTNRQEGFSAESAIPLWKE 2323
Query: 1239 AYYSXXXXXXXXXXXXXLYFEKGIEDIWDAICEFLLYPHMWIRNISSRLVASYFAMVSEA 1060
AYYS L F K +EDIW+AI E LL+PH WIRN S RLVA YFA ++
Sbjct: 2324 AYYSLVMLEKMINQFRDLCFAKYLEDIWEAISEMLLHPHSWIRNRSVRLVALYFARATDV 2383
Query: 1059 SR-TNSEKLKLGAFLLMKPSRLFSIAVSLCCQLKAQLTEDATNIVITQNLVFAICGVHSL 883
SR TN L+ ++ +M PSRLF IA SLCCQLK DA + ++TQN+VFAICGVHSL
Sbjct: 2384 SRETNGSSLR--SYFIMSPSRLFLIATSLCCQLKMPFINDADSSLMTQNIVFAICGVHSL 2441
Query: 882 VGQSKFMGLQEFWSALEVPEQGHFIKAFQLLGSKKG--TYILASLSGEKVQNVEASVEDL 709
+GQ+ + FWS LE E+ F+KAF LL S+KG ++ +S S N + +V++
Sbjct: 2442 MGQNACIDPPAFWSTLEQQEKDRFLKAFDLLDSRKGRSMFMSSSFSSIYEDNNQLNVDNA 2501
Query: 708 QSLLVSPVLKRLGKVALQMENVQMKIVFNCFRTISSQISQEGCQRYATDLLIPLYKICEG 529
Q LVS +L+++GK+ALQM+ +QM IVFN F I +QISQ+ CQ YA +L+PLYK+CEG
Sbjct: 2502 QRALVSLLLRKMGKIALQMDVIQMGIVFNSFGNIMAQISQDDCQHYAHVILLPLYKVCEG 2561
Query: 528 FAGKVIADDVKQLAEEVRESIKGILGVENFVKVYNEIRKNLKAKRDKRKHQEKLMAVINP 349
FAGKV+ D+VK+LAE+ + ++ ILG +NFV+VYN IRKNLK KR+KR+ +EKLMAVINP
Sbjct: 2562 FAGKVVTDNVKKLAEDTCKKLENILGTQNFVQVYNLIRKNLKLKRNKRRQEEKLMAVINP 2621
Query: 348 MRN 340
MRN
Sbjct: 2622 MRN 2624
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
gi|355490698|gb|AES71901.1| Small subunit processome
component-like protein [Medicago truncatula]
Length = 2733
Score = 973 bits (2514), Expect = 0.0
Identities = 526/918 (57%), Positives = 662/918 (72%), Gaps = 27/918 (2%)
Frame = -2
Query: 3012 MELQLPSIIHRICNFLKNRLESVRDEARHALAACSKELGLEYLQFIVKVLRATLKRGYEL 2833
M+ LP+I+HRI NFLK+ LES+RDEAR ALA C KELGLEYLQFIVKVLR+TLKRGYEL
Sbjct: 1792 MDTYLPTIVHRISNFLKSHLESIRDEARSALATCLKELGLEYLQFIVKVLRSTLKRGYEL 1851
Query: 2832 HVLGYTLNFILSKALLSPSTGRLDYCLEELLSVAENDILGDVAEEKEVEKIASKMKETKK 2653
HVLGYTL+FILSK L S G++DYCL +LLSV ENDILG VAE+KEVEKIASKMKETKK
Sbjct: 1852 HVLGYTLHFILSKCLSSAICGKIDYCLGDLLSVIENDILGVVAEQKEVEKIASKMKETKK 1911
Query: 2652 PKSFGTLKLIAQSITFKTHALKLLSPVKAHLHKHLTPKLKAKLEKMLTSIAEGIECNPSV 2473
SF +LK +AQ++TFK+ ALKLL+P+ AHL KH+T +K KLE ML SIA GIE NPSV
Sbjct: 1912 KTSFESLKFVAQNVTFKSCALKLLAPMTAHLQKHVTQNVKGKLENMLHSIAAGIESNPSV 1971
Query: 2472 DHTDLFVFVYGLIEDGIVEENLQGRDPPTAKSSKQLSNGVSDKRKSSPWIIGYKSQSSHL 2293
D TDLFVF+Y +++DG+ +N GR S+ + KR S + SHL
Sbjct: 1972 DQTDLFVFIYRIVDDGL--KNEIGRHESKLLKSEDKDRRTNTKRIFSGSAVASGLLCSHL 2029
Query: 2292 VTVFALRVLHNHLKSMKMDKKDEQMLSMLDPFVKLLGDCLRSKFEDILSAALRCLGPLIR 2113
+TVF +R+LH LK +K +DE+ LS+LDPFVKL D L SK+EDILSA+L CL L++
Sbjct: 2030 ITVFGIRILHKRLKGLKQVVEDEKTLSLLDPFVKLFSDGLCSKYEDILSASLGCLTVLVK 2089
Query: 2112 LPLPSLEVHADNIKTLLLDIAQKSGNTSSPLLQSCLNLLTVLLRSTKITLSSDQLHMLIQ 1933
LPLPSL+ HA+ IK+ +LDIAQ S N+SSPL+QSCL LT+LLR TKI+L+S+Q+H+LIQ
Sbjct: 2090 LPLPSLQEHAERIKSAVLDIAQSSVNSSSPLMQSCLTFLTMLLRKTKISLTSNQIHILIQ 2149
Query: 1932 FPLFVDLERNPSFLALLLLKAIVRRKL-VVPEIFDVVTRVAELMVTSQVEPIRKKCSQIL 1756
P+F+DLERNPS +AL LLK+IV+RKL VPEI+D+VTRVAELMVTSQ+E IRKKCS+IL
Sbjct: 2150 LPIFLDLERNPSLVALSLLKSIVKRKLDDVPEIYDIVTRVAELMVTSQMESIRKKCSKIL 2209
Query: 1755 LRFLLDYPLSHKRLQQHLDFLLSNLSYEHSSGREAVLEMLHAIIIKFPKHTVDEQAQTFF 1576
L+FLLDY LS KRLQQHLDFLLSNLSYEHS+GRE+VLEM++AII+KFP + +DEQ+QTFF
Sbjct: 2210 LQFLLDYRLSQKRLQQHLDFLLSNLSYEHSTGRESVLEMINAIIVKFPPNILDEQSQTFF 2269
Query: 1575 LHLVVCLANDQDSKVRSMVGAALKLLIGRTSQSALNSILEYSLSWYVGEKKNLWSAAAQX 1396
LHLVV LAND D VRSM GAA+K LIG S ++L+SIL+Y+LSWY+G+K+ LW AAAQ
Sbjct: 2270 LHLVVRLANDSDDIVRSMSGAAIKKLIGSVSPNSLDSILKYTLSWYLGDKQQLWGAAAQS 2329
Query: 1395 XXXXXXXXXXGFQ-----------------RHINNALPVMKSILKSALPIVVGEQPKYSN 1267
F +HI+ LPV IL+SAL V +
Sbjct: 2330 WCPYGFAKVESFSAEWVLGLLIEVIKKGFLKHIDCILPVTCRILQSALHAVTNRHESFEV 2389
Query: 1266 EAMIPFWREAYYSXXXXXXXXXXXXXLYFEKGIEDIWDAICEFLLYPHMWIRNISSRLVA 1087
E+ IP W+EAYYS F K +EDIW+AICE LL+PH W+RN S RL+A
Sbjct: 2390 ESTIPLWKEAYYSLVMLEKMIHEFHDECFAKHLEDIWEAICEMLLHPHSWLRNKSVRLIA 2449
Query: 1086 SYFAMVSEASRTNSEKLKLGAFLLMKPSRLFSIAVSLCCQLKAQLTEDATNIVITQNLVF 907
YFA V + S ++ +M PSRL+ IA SLCCQLK L +DA + ++TQN+VF
Sbjct: 2450 LYFAHVVNSENDQS---STSSYFMMTPSRLYLIATSLCCQLKMPLIDDADSNLMTQNIVF 2506
Query: 906 AICGVHSLVGQSKFMGLQEFWSALEVPEQGHFIKAFQLLGSKK--GTYILASLSGEKVQN 733
AIC VHSL+ Q+ + FWSALE E+ F+KAF L+ ++K ++ +SL+
Sbjct: 2507 AICRVHSLMRQTACIDPPAFWSALEQHEKDRFLKAFDLINARKERSMFVSSSLTSSSSSV 2566
Query: 732 VEAS----VEDLQSLLVSPVLKRLGKVALQMENVQMKIVFNCFRTISSQ---ISQEGCQR 574
E S V + Q LVS +LK++GK+ALQ + +QM IVFN F I +Q IS++ C
Sbjct: 2567 CEDSSQLNVNNTQYTLVSLLLKKMGKIALQADAIQMGIVFNSFGKIMAQIQIISKDDCLN 2626
Query: 573 YATDLLIPLYKICEGFAGKVIADDVKQLAEEVRESIKGILGVENFVKVYNEIRKNLKAKR 394
YA +L+PLYK+ EGFAGKVIADD+K+LA++ R I+ ILG +N+V+VYN IRKNL +KR
Sbjct: 2627 YAHVVLLPLYKVSEGFAGKVIADDLKKLADDARGKIEHILGTQNYVQVYNLIRKNLSSKR 2686
Query: 393 DKRKHQEKLMAVINPMRN 340
+KRK +EKLMAV NPMRN
Sbjct: 2687 NKRKQEEKLMAVTNPMRN 2704