BLASTX nr result

ID: Cimicifuga21_contig00005112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005112
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316154.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-29
ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis ...    82   2e-28
gb|ABK24756.1| unknown [Picea sitchensis]                              79   4e-28
gb|AFK48771.1| unknown [Lotus japonicus]                               81   2e-27
ref|XP_002311284.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-27

>ref|XP_002316154.1| predicted protein [Populus trichocarpa] gi|222865194|gb|EEF02325.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score = 82.8 bits (203), Expect(2) = 2e-29
 Identities = 38/70 (54%), Positives = 47/70 (67%)
 Frame = -2

Query: 389 TYILLLEVPMLMKQPIYVYYQLHNFLQNHKRYVDDQNNEQLKFPDKENATRGCHYTTAST 210
           T  + + +P  MKQPIYVYYQL NF QNH+RYV  +++EQLK   KEN T  C     +T
Sbjct: 106 TCTISMTIPKRMKQPIYVYYQLDNFYQNHRRYVKSRSDEQLKSASKENDTSSCEPEDTAT 165

Query: 209 DQGTIVPCGL 180
            +G IVPCGL
Sbjct: 166 GRGAIVPCGL 175



 Score = 71.2 bits (173), Expect(2) = 2e-29
 Identities = 31/51 (60%), Positives = 39/51 (76%)
 Frame = -3

Query: 190 LVAWSIFNDSYTLLRNNEPLLVNKEGILWKSDGEERFGSEVFLKNFHNGNL 38
           L+AWS+FND+Y+  R N+ L VNK+GI WKSD E+RFG +VF KNF  G L
Sbjct: 175 LIAWSLFNDTYSFSRLNQSLTVNKKGIAWKSDKEKRFGKDVFPKNFQGGGL 225


>ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis vinifera]
           gi|297736110|emb|CBI24148.3| unnamed protein product
           [Vitis vinifera]
          Length = 349

 Score = 81.6 bits (200), Expect(2) = 2e-28
 Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 6/69 (8%)
 Frame = -3

Query: 190 LVAWSIFNDSYTLLRNNEPLLVNKEGILWKSDGEERFGSEVFLKNFHNG------NLNSS 29
           L+AWS+FND+Y   RNNE L +NK+GI WKSD E +FG +V+ KNF NG       LN S
Sbjct: 174 LIAWSLFNDTYNFSRNNEQLSLNKKGISWKSDREHKFGKDVYPKNFQNGTLIGGATLNES 233

Query: 28  KPLSEQEAL 2
            PLSEQE L
Sbjct: 234 IPLSEQEDL 242



 Score = 69.3 bits (168), Expect(2) = 2e-28
 Identities = 35/65 (53%), Positives = 41/65 (63%)
 Frame = -2

Query: 374 LEVPMLMKQPIYVYYQLHNFLQNHKRYVDDQNNEQLKFPDKENATRGCHYTTASTDQGTI 195
           L VP  MKQPIYVYYQL NF QNH+RYV  +N+EQL+  +  N T  C       +   I
Sbjct: 111 LTVPKKMKQPIYVYYQLDNFYQNHRRYVKSRNDEQLRSGNSANETSDCK-PEDYANGAVI 169

Query: 194 VPCGL 180
           VPCGL
Sbjct: 170 VPCGL 174


>gb|ABK24756.1| unknown [Picea sitchensis]
          Length = 354

 Score = 79.0 bits (193), Expect(2) = 4e-28
 Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 6/69 (8%)
 Frame = -3

Query: 190 LVAWSIFNDSYTLLRNNEPLLVNKEGILWKSDGEERFGSEVFLKNFHNG------NLNSS 29
           L+AWS+FND+Y+  + N+PL+VNK+ I WKSD E +FG +V+ KNF +G       LN+S
Sbjct: 176 LIAWSLFNDTYSFYKGNKPLIVNKKDISWKSDREHKFGKDVYPKNFQSGGLIGGAKLNAS 235

Query: 28  KPLSEQEAL 2
            PLSEQE L
Sbjct: 236 IPLSEQEDL 244



 Score = 70.9 bits (172), Expect(2) = 4e-28
 Identities = 36/65 (55%), Positives = 43/65 (66%)
 Frame = -2

Query: 374 LEVPMLMKQPIYVYYQLHNFLQNHKRYVDDQNNEQLKFPDKENATRGCHYTTASTDQGTI 195
           L+VP  MK+PIYVYYQL NF QNH+RYV  +N++QL     EN T  C    A+T    I
Sbjct: 113 LKVPKHMKRPIYVYYQLDNFYQNHRRYVKSRNDQQLMKAGSENETDSCK-PEATTGSLPI 171

Query: 194 VPCGL 180
           VPCGL
Sbjct: 172 VPCGL 176


>gb|AFK48771.1| unknown [Lotus japonicus]
          Length = 343

 Score = 81.3 bits (199), Expect(2) = 2e-27
 Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 6/69 (8%)
 Frame = -3

Query: 190 LVAWSIFNDSYTLLRNNEPLLVNKEGILWKSDGEERFGSEVFLKNFHNG------NLNSS 29
           L+AWS+FND+Y+  RNN  L VNK+GI WKSD E +FG +VF KNF NG      +LN +
Sbjct: 168 LIAWSMFNDTYSFSRNNNNLTVNKKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNET 227

Query: 28  KPLSEQEAL 2
            PLSEQE L
Sbjct: 228 IPLSEQEDL 236



 Score = 66.2 bits (160), Expect(2) = 2e-27
 Identities = 33/65 (50%), Positives = 41/65 (63%)
 Frame = -2

Query: 374 LEVPMLMKQPIYVYYQLHNFLQNHKRYVDDQNNEQLKFPDKENATRGCHYTTASTDQGTI 195
           + V   MK PIYVYYQL NF QNH+RYV  +N+EQL+   K N+T GC       +   I
Sbjct: 105 IHVEKRMKSPIYVYYQLDNFYQNHRRYVKSRNDEQLRDSSKANSTSGCK-PEDYVNGVPI 163

Query: 194 VPCGL 180
           +PCGL
Sbjct: 164 LPCGL 168


>ref|XP_002311284.1| predicted protein [Populus trichocarpa] gi|222851104|gb|EEE88651.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score = 75.9 bits (185), Expect(2) = 3e-27
 Identities = 37/69 (53%), Positives = 46/69 (66%), Gaps = 6/69 (8%)
 Frame = -3

Query: 190 LVAWSIFNDSYTLLRNNEPLLVNKEGILWKSDGEERFGSEVFLKNFHNGNLNSSK----- 26
           L+AWS+FND+Y   R N+ L VNK+GI WKSD ++RFG +VF KNF  G L   K     
Sbjct: 175 LIAWSMFNDTYNFSRLNQELTVNKKGIAWKSDKQKRFGKDVFPKNFQGGGLQGGKILNEK 234

Query: 25  -PLSEQEAL 2
            PL+EQE L
Sbjct: 235 IPLNEQEDL 243



 Score = 70.9 bits (172), Expect(2) = 3e-27
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = -2

Query: 389 TYILLLEVPMLMKQPIYVYYQLHNFLQNHKRYVDDQNNEQLKFPDKENATRGCHYTTAST 210
           T  + + +P  MK+PIYVYYQL NF QNH+RYV  ++++QLK   KE  T  C     + 
Sbjct: 106 TCTISMTIPKRMKKPIYVYYQLDNFYQNHRRYVKSRSDKQLKSLSKETDTSSCKPEDTTA 165

Query: 209 DQGTIVPCGL 180
               IVPCGL
Sbjct: 166 GGAAIVPCGL 175


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