BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005106
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-li...   119   2e-34
ref|XP_002317948.1| f-box family protein [Populus trichocarpa] g...    94   4e-25
ref|XP_002322044.1| f-box family protein [Populus trichocarpa] g...    92   9e-25
gb|ADL36680.1| DOF domain class transcription factor [Malus x do...    86   1e-23
ref|XP_002514602.1| conserved hypothetical protein [Ricinus comm...    89   4e-23

>ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-like [Vitis vinifera]
          Length = 291

 Score =  119 bits (298), Expect(2) = 2e-34
 Identities = 75/156 (48%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
 Frame = -3

Query: 507 YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC-XXXXXXXXXXSDHQKERKXXXXXXXXX 331
           YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC           SD  +ERK         
Sbjct: 47  YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSKAKSSSDAPRERKSNSHSSSES 106

Query: 330 XXXXXXXXXXXXXXXTRNEAAACSSSVPNFLNFSDSRLFMNQTTPNPNFEAQILESLDQS 151
                          T   +A  S++    + F +SR F  Q +PNPNFE   L  LD S
Sbjct: 107 SSLTATTTAAATTATTEAVSAPSSNAASTLVGFRESRFFAPQ-SPNPNFEMPTL--LDHS 163

Query: 150 SDCGIFAENGSFTSLMNVGNT-----FNFSEISPFR 58
           SD  IF E GSFTSLM   N      FN S+ISPF+
Sbjct: 164 SDGNIFPEIGSFTSLMTGSNDPAALGFNISDISPFK 199



 Score = 53.5 bits (127), Expect(2) = 2e-34
 Identities = 24/44 (54%), Positives = 28/44 (63%)
 Frame = -1

Query: 719 LQSMHXXXXXXXXXXXXXXRLRPYPNQALKCPRCDSLNTKFCYY 588
           +Q +H              RLRP+ NQALKCPRC+SLNTKFCYY
Sbjct: 1   MQDIHSMGAGGGRIFGGDRRLRPHQNQALKCPRCESLNTKFCYY 44


>ref|XP_002317948.1| f-box family protein [Populus trichocarpa]
           gi|222858621|gb|EEE96168.1| f-box family protein
           [Populus trichocarpa]
          Length = 329

 Score = 93.6 bits (231), Expect(2) = 4e-25
 Identities = 66/172 (38%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
 Frame = -3

Query: 507 YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC----------------------XXXXXX 394
           YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC                            
Sbjct: 53  YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSRPKQNTPITTCDTITASSTTPQ 112

Query: 393 XXXXSDHQKERKXXXXXXXXXXXXXXXXXXXXXXXXTRNEAAACSSSV--PNFLN-FSDS 223
                  Q++ K                            +A   SSV   N LN   +S
Sbjct: 113 ELQEQHQQRDHKSSDSHSSSESSSLTATNNTNANTTAEAVSALSVSSVVSNNLLNGIVES 172

Query: 222 RLFMNQTTPNPNFEAQILESLDQSSDCGIFAENGSFTSLM-NVGNTFNFSEI 70
           ++F +    NP+FE  +LE   Q SDCGIF+E GSFTSL+ +  + F FS +
Sbjct: 173 KIFPHGNV-NPSFEPSLLE---QGSDCGIFSEIGSFTSLITSTNDLFGFSNM 220



 Score = 48.1 bits (113), Expect(2) = 4e-25
 Identities = 25/50 (50%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -1

Query: 728 MQDLQSMHXXXXXXXXXXXXXXRLRPYPNQ---ALKCPRCDSLNTKFCYY 588
           MQD  S+               +LRP+ +Q   ALKCPRCDSLNTKFCYY
Sbjct: 1   MQDTHSIGGGGRLFSGGGGGDRKLRPHHHQNQQALKCPRCDSLNTKFCYY 50


>ref|XP_002322044.1| f-box family protein [Populus trichocarpa]
           gi|118488417|gb|ABK96024.1| unknown [Populus
           trichocarpa] gi|222869040|gb|EEF06171.1| f-box family
           protein [Populus trichocarpa]
          Length = 321

 Score = 92.4 bits (228), Expect(2) = 9e-25
 Identities = 63/167 (37%), Positives = 78/167 (46%), Gaps = 24/167 (14%)
 Frame = -3

Query: 507 YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC-----------------XXXXXXXXXXS 379
           YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC                            
Sbjct: 53  YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSKLKQNTPSTTSDAITTSSTRPQ 112

Query: 378 DHQKERKXXXXXXXXXXXXXXXXXXXXXXXXTRNEAAACSSSVP------NFLN-FSDSR 220
           + Q++ +                          N A    S++       N LN   +S+
Sbjct: 113 ELQEQHQRRDHMSSNSHSSSESSSLTATNNTNANTAVEAVSALSVNSVSNNLLNGIVESK 172

Query: 219 LFMNQTTPNPNFEAQILESLDQSSDCGIFAENGSFTSLMNVGNTFNF 79
           +F  +   NP+FE  +LE   Q SDCGIF+E GSFTSL+   N  +F
Sbjct: 173 IF-PRGDMNPSFEPALLE---QGSDCGIFSEIGSFTSLITSTNDLSF 215



 Score = 48.1 bits (113), Expect(2) = 9e-25
 Identities = 26/50 (52%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -1

Query: 728 MQDLQSMHXXXXXXXXXXXXXXRLRPYPNQ---ALKCPRCDSLNTKFCYY 588
           MQD  S+               RLRP+ +Q   ALKCPRCDSLNTKFCYY
Sbjct: 1   MQDTHSIGGGGRLFSGGGGGDRRLRPHHHQNHQALKCPRCDSLNTKFCYY 50


>gb|ADL36680.1| DOF domain class transcription factor [Malus x domestica]
          Length = 520

 Score = 85.9 bits (211), Expect(2) = 1e-23
 Identities = 63/183 (34%), Positives = 82/183 (44%), Gaps = 28/183 (15%)
 Frame = -3

Query: 507 YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC-------------------XXXXXXXXX 385
           YNLSQPRHFCK+CRRYWTKGGVLRNVPVGGGC                            
Sbjct: 249 YNLSQPRHFCKACRRYWTKGGVLRNVPVGGGCRKTKRSKTKNSSSSSPISSPPPPPPQPS 308

Query: 384 XSDHQKERKXXXXXXXXXXXXXXXXXXXXXXXXTRNEAAACSSSVPNFLNFSDSRLFMNQ 205
            +D  K                           +   +   +S++ + ++  +S  F++Q
Sbjct: 309 SADQNKSSSRSSSESSSLTNTTAAAATAATEAVSEPSSTGSASNLLSNIHNPESNFFISQ 368

Query: 204 TTPNPNFE--AQILESLDQSSDC-GIFAENGSFTSLMNVGN--TFNFSEI--SPFRL--N 52
              N  FE  A     L+ S++  GIF+E GSFTSL+   N   F+F  I  SPF    N
Sbjct: 369 GGANGGFEPGASAAALLEHSTEINGIFSEIGSFTSLITSSNDMPFSFGNINGSPFNQQGN 428

Query: 51  HHH 43
           H H
Sbjct: 429 HDH 431



 Score = 51.2 bits (121), Expect(2) = 1e-23
 Identities = 28/50 (56%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = -1

Query: 728 MQDLQSMHXXXXXXXXXXXXXXRLRPY--PNQ-ALKCPRCDSLNTKFCYY 588
           MQD+ S+               RLRP+  PNQ ALKCPRCDSLNTKFCYY
Sbjct: 197 MQDIHSVRGGGRFFGGSGGGDPRLRPHQHPNQHALKCPRCDSLNTKFCYY 246



 Score = 76.6 bits (187), Expect(2) = 6e-21
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = -3

Query: 507 YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 412
           YNLSQPRHFCK+CRRYWTKGGVLRNVPVGGGC
Sbjct: 53  YNLSQPRHFCKACRRYWTKGGVLRNVPVGGGC 84



 Score = 51.2 bits (121), Expect(2) = 6e-21
 Identities = 28/50 (56%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = -1

Query: 728 MQDLQSMHXXXXXXXXXXXXXXRLRPY--PNQ-ALKCPRCDSLNTKFCYY 588
           MQD+ S+               RLRP+  PNQ ALKCPRCDSLNTKFCYY
Sbjct: 1   MQDIHSVRGGGRFFGGSGGGDPRLRPHQHPNQHALKCPRCDSLNTKFCYY 50


>ref|XP_002514602.1| conserved hypothetical protein [Ricinus communis]
           gi|223546206|gb|EEF47708.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score = 89.0 bits (219), Expect(2) = 4e-23
 Identities = 56/157 (35%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
 Frame = -3

Query: 507 YNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCXXXXXXXXXXSD---------------- 376
           YNLSQPRHFCK+CRRYWTKGGVLRNVPVGGGC          +                 
Sbjct: 53  YNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSKPKHTTTTTTNSTITAPTISTN 112

Query: 375 ------HQKERKXXXXXXXXXXXXXXXXXXXXXXXXTRNEAAACSSSVPNFLNFSDSRLF 214
                  ++ERK                          + A+A ++ + N     +S+L+
Sbjct: 113 TSTILAQEEERKSSNSHSSSESSSLTATNTATGLEAASSSASATTNILNN--GIGESKLY 170

Query: 213 MNQTTPNPNFEAQILESLDQSSDCGIFAENGSFTSLM 103
           ++  T   +FE  +LE   Q SDCGIF+E  S TSL+
Sbjct: 171 VHPNTNTTSFEHGLLE---QESDCGIFSEIASLTSLI 204



 Score = 46.2 bits (108), Expect(2) = 4e-23
 Identities = 25/50 (50%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -1

Query: 728 MQDLQSMHXXXXXXXXXXXXXXRLRPYPNQ---ALKCPRCDSLNTKFCYY 588
           MQD+ S+               RLR + +Q   ALKCPRCDSLNTKFCYY
Sbjct: 1   MQDIHSIGGGGRLFSGGGGGDRRLRAHHHQNQQALKCPRCDSLNTKFCYY 50