BLASTX nr result

ID: Cimicifuga21_contig00005088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005088
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1...   668   0.0  
emb|CBI19093.3| unnamed protein product [Vitis vinifera]              657   0.0  
ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1...   647   0.0  
ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago tr...   646   0.0  
ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1...   646   0.0  

>ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
          Length = 584

 Score =  668 bits (1724), Expect = 0.0
 Identities = 337/460 (73%), Positives = 367/460 (79%)
 Frame = -2

Query: 1381 MDNLQAQSRHSLGFHSHMSSAPRTPIADDXXXXXXXXXXXXXXXXXXXIPLQLLEQQPHN 1202
            MD   AQS  SLGFHSH S AP TP+ADD                   +PLQL EQ+   
Sbjct: 1    MDASHAQSGLSLGFHSHSSLAPMTPLADDSVKLQIASDFSSLGNPIQSVPLQLFEQRCEK 60

Query: 1201 QRDXXXXXXXXXXXXXXXXXXXEFSLLGHSMCLKRRRDGDSYSISSPVFKRAMAGCSMES 1022
              +                    F +LGH MCLKR RD + +S SS   K A+    +E 
Sbjct: 61   FSNGSGGQSEDGEDEE-------FHILGHPMCLKRPRD-EQFSRSSSPSKVALVESGLEQ 112

Query: 1021 RREAVRAWGNQPLSVADPVIHEIMEKEKQRQVKGIELIASENFVCRAVMEALGSHLTNKY 842
            RR AVRAWGNQPLSVADP + +IMEKEK+RQ KGIELIASENFVCRAVMEALGSHLTNKY
Sbjct: 113  RRVAVRAWGNQPLSVADPDVFQIMEKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKY 172

Query: 841  SEGMPGARYYVGNQYIDQIELICCQRALEAFHLDSGKWGVNVQPYSCTSANIAVFTGLLL 662
            SEGMPGARYY GN YIDQIEL+CC+RAL AFHLDS KWGVNVQPYSCTSAN AV+TGLLL
Sbjct: 173  SEGMPGARYYTGNDYIDQIELLCCRRALAAFHLDSEKWGVNVQPYSCTSANFAVYTGLLL 232

Query: 661  PKDRIMGLDTPSGGHLSHGYYTPSGKKVSAASIFFESLPYKVNPHTGYIDYDKLEENALN 482
            PKDRIMGLD+PSGGHLSHGYY PSGKKVS  SIFFESLPYKVNP TGYIDYDKLEE AL+
Sbjct: 233  PKDRIMGLDSPSGGHLSHGYYMPSGKKVSGTSIFFESLPYKVNPQTGYIDYDKLEEKALD 292

Query: 481  YRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECINPFDYCDIVT 302
            +RPKILICGGSSYPREW+YARFRQIADKCGAVLMCDMA ISG+VAAKEC +PFDYCDIVT
Sbjct: 293  FRPKILICGGSSYPREWNYARFRQIADKCGAVLMCDMAQISGIVAAKECASPFDYCDIVT 352

Query: 301  STTHKSLRGPRGGIVFYRKGPKPRKRGSLSNQGDEYDRYDFEEKINFAVFPSLQGGPHNN 122
            STTHK+LRGPRGGI+FYRKG K RK G L +QGD+ ++YDFEE+INFAVFPSLQGGPHNN
Sbjct: 353  STTHKNLRGPRGGIIFYRKGAKARKPGMLLSQGDDSNQYDFEERINFAVFPSLQGGPHNN 412

Query: 121  HIAALAIALKQVATPEYHAYMQQVKKNAHALASALLRRKC 2
            HIAALAIALKQVATPEY AYMQQVKKNA ALA+ALLR+ C
Sbjct: 413  HIAALAIALKQVATPEYKAYMQQVKKNAQALAAALLRKSC 452


>emb|CBI19093.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  657 bits (1696), Expect = 0.0
 Identities = 333/460 (72%), Positives = 364/460 (79%)
 Frame = -2

Query: 1381 MDNLQAQSRHSLGFHSHMSSAPRTPIADDXXXXXXXXXXXXXXXXXXXIPLQLLEQQPHN 1202
            MD   AQS  SLGFHSH S AP TP+ADD                     LQ+     + 
Sbjct: 1    MDASHAQSGLSLGFHSHSSLAPMTPLADDSVK------------------LQIASDFSNG 42

Query: 1201 QRDXXXXXXXXXXXXXXXXXXXEFSLLGHSMCLKRRRDGDSYSISSPVFKRAMAGCSMES 1022
            + +                    F +LGH MCLKR RD + +S SS   K A+    +E 
Sbjct: 43   EDEE-------------------FHILGHPMCLKRPRD-EQFSRSSSPSKVALVESGLEQ 82

Query: 1021 RREAVRAWGNQPLSVADPVIHEIMEKEKQRQVKGIELIASENFVCRAVMEALGSHLTNKY 842
            RR AVRAWGNQPLSVADP + +IMEKEK+RQ KGIELIASENFVCRAVMEALGSHLTNKY
Sbjct: 83   RRVAVRAWGNQPLSVADPDVFQIMEKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKY 142

Query: 841  SEGMPGARYYVGNQYIDQIELICCQRALEAFHLDSGKWGVNVQPYSCTSANIAVFTGLLL 662
            SEGMPGARYY GN YIDQIEL+CC+RAL AFHLDS KWGVNVQPYSCTSAN AV+TGLLL
Sbjct: 143  SEGMPGARYYTGNDYIDQIELLCCRRALAAFHLDSEKWGVNVQPYSCTSANFAVYTGLLL 202

Query: 661  PKDRIMGLDTPSGGHLSHGYYTPSGKKVSAASIFFESLPYKVNPHTGYIDYDKLEENALN 482
            PKDRIMGLD+PSGGHLSHGYY PSGKKVS  SIFFESLPYKVNP TGYIDYDKLEE AL+
Sbjct: 203  PKDRIMGLDSPSGGHLSHGYYMPSGKKVSGTSIFFESLPYKVNPQTGYIDYDKLEEKALD 262

Query: 481  YRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECINPFDYCDIVT 302
            +RPKILICGGSSYPREW+YARFRQIADKCGAVLMCDMA ISG+VAAKEC +PFDYCDIVT
Sbjct: 263  FRPKILICGGSSYPREWNYARFRQIADKCGAVLMCDMAQISGIVAAKECASPFDYCDIVT 322

Query: 301  STTHKSLRGPRGGIVFYRKGPKPRKRGSLSNQGDEYDRYDFEEKINFAVFPSLQGGPHNN 122
            STTHK+LRGPRGGI+FYRKG K RK G L +QGD+ ++YDFEE+INFAVFPSLQGGPHNN
Sbjct: 323  STTHKNLRGPRGGIIFYRKGAKARKPGMLLSQGDDSNQYDFEERINFAVFPSLQGGPHNN 382

Query: 121  HIAALAIALKQVATPEYHAYMQQVKKNAHALASALLRRKC 2
            HIAALAIALKQVATPEY AYMQQVKKNA ALA+ALLR+ C
Sbjct: 383  HIAALAIALKQVATPEYKAYMQQVKKNAQALAAALLRKSC 422


>ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
          Length = 563

 Score =  647 bits (1670), Expect = 0.0
 Identities = 333/460 (72%), Positives = 361/460 (78%)
 Frame = -2

Query: 1381 MDNLQAQSRHSLGFHSHMSSAPRTPIADDXXXXXXXXXXXXXXXXXXXIPLQLLEQQPHN 1202
            MD    QS  SLGF S  +S P  P +D                     PLQL+E Q  N
Sbjct: 1    MDLSHPQSNLSLGFSSSHASPP--PRSDPPV------------------PLQLMEPQTEN 40

Query: 1201 QRDXXXXXXXXXXXXXXXXXXXEFSLLGHSMCLKRRRDGDSYSISSPVFKRAMAGCSMES 1022
                                  EF +LGHSMCLKRRRD DS S SS   KR      +++
Sbjct: 41   GN------LDVESDDDEDKEVEEFRILGHSMCLKRRRDCDSSSSSSAA-KRVSVEPDLDA 93

Query: 1021 RREAVRAWGNQPLSVADPVIHEIMEKEKQRQVKGIELIASENFVCRAVMEALGSHLTNKY 842
            R+ AVRAWG QPLS+ADP +HEIMEKEK+RQ +GIELIASENFVCRAVMEALGSHLTNKY
Sbjct: 94   RKAAVRAWGCQPLSIADPDVHEIMEKEKKRQFRGIELIASENFVCRAVMEALGSHLTNKY 153

Query: 841  SEGMPGARYYVGNQYIDQIELICCQRALEAFHLDSGKWGVNVQPYSCTSANIAVFTGLLL 662
            SEGMPGARYY GNQYID+IE +CC+RAL AF LD   WGVNVQPYSCTSAN AV+TGLLL
Sbjct: 154  SEGMPGARYYGGNQYIDEIETLCCERALNAFGLDPKCWGVNVQPYSCTSANFAVYTGLLL 213

Query: 661  PKDRIMGLDTPSGGHLSHGYYTPSGKKVSAASIFFESLPYKVNPHTGYIDYDKLEENALN 482
            P DRIMGLDTPSGG+ SHGYYTP+GKKVS ASIFFESLPYKVNP TGYIDYDKLEE AL+
Sbjct: 214  PGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLPYKVNPQTGYIDYDKLEERALD 273

Query: 481  YRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECINPFDYCDIVT 302
            +RPKILICGGSSYPREWDYARFR IADKCGAVL+CDMA ISG++AAKEC+NPFDYCDIVT
Sbjct: 274  FRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGIIAAKECVNPFDYCDIVT 333

Query: 301  STTHKSLRGPRGGIVFYRKGPKPRKRGSLSNQGDEYDRYDFEEKINFAVFPSLQGGPHNN 122
            STTHKSLRGPRGGI+FYRKG KPRKRG L +QG E D+YDFEEKINFAVFPS+QGGPHNN
Sbjct: 334  STTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGHESDQYDFEEKINFAVFPSMQGGPHNN 393

Query: 121  HIAALAIALKQVATPEYHAYMQQVKKNAHALASALLRRKC 2
            HIAALAIALKQVATPEY AYMQQVKKNA ALA ALLRRKC
Sbjct: 394  HIAALAIALKQVATPEYKAYMQQVKKNAQALACALLRRKC 433


>ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago truncatula]
            gi|355482048|gb|AES63251.1| Serine
            hydroxymethyltransferase [Medicago truncatula]
          Length = 593

 Score =  646 bits (1667), Expect = 0.0
 Identities = 328/468 (70%), Positives = 366/468 (78%), Gaps = 8/468 (1%)
 Frame = -2

Query: 1381 MDNLQAQSRHSLGFHS-HMSSAPRTPIADDXXXXXXXXXXXXXXXXXXXIPLQLLEQQPH 1205
            MD    QS  SL F S H S  PR PI DD                   +PLQL+E  P 
Sbjct: 1    MDLSHHQSNLSLNFSSSHASPPPRPPIPDDSIALHLESSFRDPSNPVPTVPLQLME--PQ 58

Query: 1204 NQRDXXXXXXXXXXXXXXXXXXXEFSLLGHSMCLKRRRDGDSYSISSPVFKRAMAGCS-- 1031
             +++                   EF +LGHSMC+KRRRD +S +I++   KRA       
Sbjct: 59   TEKENGNAIDIESNNDEDDREVEEFRILGHSMCIKRRRDSESSTITT---KRASVESDRG 115

Query: 1030 -----MESRREAVRAWGNQPLSVADPVIHEIMEKEKQRQVKGIELIASENFVCRAVMEAL 866
                 +ESR+ AVR+WG+QPL VADP I+EI+EKEK+RQ KGIELIASENFVCRAVMEAL
Sbjct: 116  DRLLDLESRKAAVRSWGDQPLQVADPDIYEIIEKEKKRQFKGIELIASENFVCRAVMEAL 175

Query: 865  GSHLTNKYSEGMPGARYYVGNQYIDQIELICCQRALEAFHLDSGKWGVNVQPYSCTSANI 686
            GSHLTNKYSEGMPGARYY GNQYID+IE +CC+RAL AF+LD   WGVNVQPYSCTSAN 
Sbjct: 176  GSHLTNKYSEGMPGARYYGGNQYIDEIETLCCERALAAFNLDPKCWGVNVQPYSCTSANF 235

Query: 685  AVFTGLLLPKDRIMGLDTPSGGHLSHGYYTPSGKKVSAASIFFESLPYKVNPHTGYIDYD 506
            AV+TGLL P DRIMGLDTPSGG+ SHGYYTP+GKKVS ASIFFESL YK+NP +G+IDYD
Sbjct: 236  AVYTGLLAPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLAYKINPQSGFIDYD 295

Query: 505  KLEENALNYRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECINP 326
            KLEE AL++RPKILICGGSSYPREWDYARFR +ADKCGAVL+CDMA ISG++AAKEC+NP
Sbjct: 296  KLEERALDFRPKILICGGSSYPREWDYARFRHVADKCGAVLLCDMAQISGIIAAKECVNP 355

Query: 325  FDYCDIVTSTTHKSLRGPRGGIVFYRKGPKPRKRGSLSNQGDEYDRYDFEEKINFAVFPS 146
            FDYCD+VTSTTHKSLRGPRGGI+FYRKG KPRKRG L  QG E D+YDFEEKINFAVFPS
Sbjct: 356  FDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLTQGHESDQYDFEEKINFAVFPS 415

Query: 145  LQGGPHNNHIAALAIALKQVATPEYHAYMQQVKKNAHALASALLRRKC 2
            LQGGPHNNHIAALAIALKQVATPEY AYMQQVKKNA ALASALLRRKC
Sbjct: 416  LQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKC 463


>ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
          Length = 566

 Score =  646 bits (1666), Expect = 0.0
 Identities = 328/460 (71%), Positives = 358/460 (77%)
 Frame = -2

Query: 1381 MDNLQAQSRHSLGFHSHMSSAPRTPIADDXXXXXXXXXXXXXXXXXXXIPLQLLEQQPHN 1202
            MD    QS  SLGF S  +S PR                         +PLQL+E Q  N
Sbjct: 1    MDLSHPQSNLSLGFSSSHASPPRRS--------------------DPPVPLQLMEPQTEN 40

Query: 1201 QRDXXXXXXXXXXXXXXXXXXXEFSLLGHSMCLKRRRDGDSYSISSPVFKRAMAGCSMES 1022
              +                    F +LGHSMCLKRRRD DS S S+   KR      +++
Sbjct: 41   GNNLDVESDDDDDDKEVEE----FRILGHSMCLKRRRDCDSSSSSAAAAKRVSVEPDLDA 96

Query: 1021 RREAVRAWGNQPLSVADPVIHEIMEKEKQRQVKGIELIASENFVCRAVMEALGSHLTNKY 842
            R+ AVRAWG QPLS+ADP IHEIMEKEK+RQ  GIELIASENFVCRAVMEALGSHLTNKY
Sbjct: 97   RKAAVRAWGCQPLSIADPDIHEIMEKEKKRQFCGIELIASENFVCRAVMEALGSHLTNKY 156

Query: 841  SEGMPGARYYVGNQYIDQIELICCQRALEAFHLDSGKWGVNVQPYSCTSANIAVFTGLLL 662
            SEGMPG+RYY GNQYID+IE +CC+RAL AF LD   WGVNVQPYSCTSAN +V+TGLLL
Sbjct: 157  SEGMPGSRYYGGNQYIDEIETLCCERALNAFGLDPKCWGVNVQPYSCTSANFSVYTGLLL 216

Query: 661  PKDRIMGLDTPSGGHLSHGYYTPSGKKVSAASIFFESLPYKVNPHTGYIDYDKLEENALN 482
            P DRIMGLDTPSGG+ SHGYYTP+GKKVS ASIFFESLPYKVNP TGYIDYDKLEE AL+
Sbjct: 217  PGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLPYKVNPQTGYIDYDKLEERALD 276

Query: 481  YRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECINPFDYCDIVT 302
            +RPKILICGGSSYPREWDYARFR IADKCGAVL+CDMA ISG++AAKEC+NPFDYCDIVT
Sbjct: 277  FRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGIIAAKECVNPFDYCDIVT 336

Query: 301  STTHKSLRGPRGGIVFYRKGPKPRKRGSLSNQGDEYDRYDFEEKINFAVFPSLQGGPHNN 122
            STTHKSLRGPRGGI+FYRKG KPR RG L +QG E D+YDFEEKINFAVFPS+QGGPHNN
Sbjct: 337  STTHKSLRGPRGGIIFYRKGTKPRNRGILLSQGHESDQYDFEEKINFAVFPSMQGGPHNN 396

Query: 121  HIAALAIALKQVATPEYHAYMQQVKKNAHALASALLRRKC 2
            HIAALAIALKQVATPEY AYMQQVKKNA ALA ALLRRKC
Sbjct: 397  HIAALAIALKQVATPEYKAYMQQVKKNAQALACALLRRKC 436


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