BLASTX nr result
ID: Cimicifuga21_contig00005075
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005075
(1524 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 ... 578 e-162
ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isofo... 558 e-156
ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glyc... 550 e-154
ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|1... 537 e-150
ref|NP_001057959.1| Os06g0588900 [Oryza sativa Japonica Group] g... 528 e-147
>ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 [Vitis vinifera]
gi|359475593|ref|XP_003631711.1| PREDICTED: protein RMD5
homolog A isoform 2 [Vitis vinifera]
gi|296088090|emb|CBI35449.3| unnamed protein product
[Vitis vinifera]
Length = 383
Score = 578 bits (1491), Expect = e-162
Identities = 287/385 (74%), Positives = 332/385 (86%), Gaps = 1/385 (0%)
Frame = +3
Query: 231 MELGSVRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVHDPASVDNRKSILTE 410
MEL +++DAFDRVAKKQKLSSSK+QEVIDQVG+EIE ALAKLQA DPAS ++KSIL E
Sbjct: 1 MELSNIKDAFDRVAKKQKLSSSKSQEVIDQVGREIEDALAKLQA--DPASPVDQKSILME 58
Query: 411 LNNKLKELVPLNQLEGPQKELNVGLSKYTKLLEKIFNPDISKAYRNVDFDNHTINQIIAC 590
L KL + +QLEG QKELN+ LSKY +LLEK FNPDISKAYRNVDFD HT+NQIIA
Sbjct: 59 LKTKLSIIGSQSQLEGSQKELNMNLSKYPRLLEKSFNPDISKAYRNVDFDFHTVNQIIAS 118
Query: 591 HFYRQGQFDLGDCFMMEAEEPE-VALKSPFIEMYQILEAMRSQNLEPAINWAATHRDHLL 767
HFYRQG FD+G+C + EA EPE ALKS F+EM+QIL+AM++++LEPA+NW + +R+ L
Sbjct: 119 HFYRQGLFDIGECLINEAGEPEDTALKSQFLEMFQILDAMKARDLEPALNWVSNNREKLK 178
Query: 768 QNGSIIELKLHRLQFVKILQNGTRGEALTYARTYLSPFASTHMAEIQKLMACLLWAGRLD 947
QNGS +ELKLHRLQFV+ILQ G R +AL YARTYL+PFAS HM EIQKLMACLLW GRLD
Sbjct: 179 QNGSNLELKLHRLQFVEILQKGGRADALNYARTYLAPFASLHMDEIQKLMACLLWVGRLD 238
Query: 948 SSPYAEFLLPTHWENLTEELTQHFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 1127
SSPY+E ++P+ WE L EELT+ FC+LLGQSYESPL+V I AG++GLPTLLKLANVMAAK
Sbjct: 239 SSPYSELMVPSLWEKLAEELTRQFCSLLGQSYESPLSVAIAAGIEGLPTLLKLANVMAAK 298
Query: 1128 KQEWLAMKQLPVPLDIGREFQFHSIFVCPVSRDQASVENPPMLMPCGHVLCKQSIVKLSK 1307
KQEW AMKQLPVP+D+GREFQFHSIFVCPVSRDQ S ENPPMLMPCGHVLCKQSI+KLSK
Sbjct: 299 KQEWQAMKQLPVPVDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIMKLSK 358
Query: 1308 NSSRTFKCPYCPLEATVVQCKQLYF 1382
+S+R FKCPYCP E+TV QC QLYF
Sbjct: 359 SSTRMFKCPYCPNESTVGQCMQLYF 383
>ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isoform 1 [Glycine max]
gi|356549477|ref|XP_003543120.1| PREDICTED: protein RMD5
homolog A-like isoform 2 [Glycine max]
Length = 385
Score = 558 bits (1439), Expect = e-156
Identities = 271/385 (70%), Positives = 322/385 (83%), Gaps = 1/385 (0%)
Frame = +3
Query: 231 MELGSVRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVHDPASVDNRKSILTE 410
MEL S++DAFDRVAKKQKLSSSK+QEV+DQVG EIEQALA +Q+ HDP++ ++KS+LTE
Sbjct: 1 MELSSIKDAFDRVAKKQKLSSSKSQEVVDQVGCEIEQALATIQSSHDPSAPVDQKSVLTE 60
Query: 411 LNNKLKELVPLNQLEGPQKELNVGLSKYTKLLEKIFNPDISKAYRNVDFDNHTINQIIAC 590
L KL + PL QLEG KELN+ L+KY KLLEK+ NPDISKAYRNVDFD H +NQIIA
Sbjct: 61 LKFKLNAIGPLQQLEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVNQIIAN 120
Query: 591 HFYRQGQFDLGDCFMMEAEEPEVA-LKSPFIEMYQILEAMRSQNLEPAINWAATHRDHLL 767
HFY QG FDLGD + EA EP+ A L+S F+EM+QI+ AMR +NL+PA+ W + +R+ L+
Sbjct: 121 HFYHQGLFDLGDSIINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLV 180
Query: 768 QNGSIIELKLHRLQFVKILQNGTRGEALTYARTYLSPFASTHMAEIQKLMACLLWAGRLD 947
Q GS +ELK+H LQFV++LQNGTR +AL YARTYL+PFAS + E KLM CLL+AGRL+
Sbjct: 181 QIGSNLELKIHTLQFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLE 240
Query: 948 SSPYAEFLLPTHWENLTEELTQHFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 1127
SSPY+E L P HWE TEELT+ FC LLGQSYE+PL+V + AGV+GLPTLLKLANVMAAK
Sbjct: 241 SSPYSELLSPIHWEMTTEELTRQFCTLLGQSYENPLSVAVAAGVEGLPTLLKLANVMAAK 300
Query: 1128 KQEWLAMKQLPVPLDIGREFQFHSIFVCPVSRDQASVENPPMLMPCGHVLCKQSIVKLSK 1307
KQEW MKQLPVP+++G+EFQFHSIFVCPVSRDQ S ENPPML+PC HVLCKQSI+KLSK
Sbjct: 301 KQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 360
Query: 1308 NSSRTFKCPYCPLEATVVQCKQLYF 1382
NS+RTFKCPYCP EATV CKQLYF
Sbjct: 361 NSTRTFKCPYCPAEATVANCKQLYF 385
>ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glycine max]
Length = 385
Score = 550 bits (1417), Expect = e-154
Identities = 267/385 (69%), Positives = 319/385 (82%), Gaps = 1/385 (0%)
Frame = +3
Query: 231 MELGSVRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVHDPASVDNRKSILTE 410
MEL S++DAFDRV KKQK+SSSK+QEV+DQVG+EIEQALA +Q+ HDP+S ++KS LTE
Sbjct: 1 MELSSIKDAFDRVTKKQKISSSKSQEVVDQVGREIEQALATIQSPHDPSSPVDQKSALTE 60
Query: 411 LNNKLKELVPLNQLEGPQKELNVGLSKYTKLLEKIFNPDISKAYRNVDFDNHTINQIIAC 590
L KL + L QLEG KELN+ L+KY KLLEK+ NPDISKAYRNVDFD H ++QIIA
Sbjct: 61 LKFKLNAIGSLQQLEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVDQIIAN 120
Query: 591 HFYRQGQFDLGDCFMMEAEEPEVA-LKSPFIEMYQILEAMRSQNLEPAINWAATHRDHLL 767
HFYRQG FDLGD + EA EP+ A L+S F+EM+QI+ AMR +NL+PA+ W + +R+ L+
Sbjct: 121 HFYRQGLFDLGDSIINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLV 180
Query: 768 QNGSIIELKLHRLQFVKILQNGTRGEALTYARTYLSPFASTHMAEIQKLMACLLWAGRLD 947
Q GS +ELK+H LQFV++LQNGTR +AL YARTYL+PFAS + E KLM CLL+AGRL+
Sbjct: 181 QIGSNLELKIHTLQFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLE 240
Query: 948 SSPYAEFLLPTHWENLTEELTQHFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 1127
SSPY+E L P HWE TEEL + FC LLGQSYE+PL+V + AGV+GLP LLKLANVMAAK
Sbjct: 241 SSPYSELLSPIHWEMTTEELARQFCTLLGQSYENPLSVAVAAGVEGLPILLKLANVMAAK 300
Query: 1128 KQEWLAMKQLPVPLDIGREFQFHSIFVCPVSRDQASVENPPMLMPCGHVLCKQSIVKLSK 1307
KQEW MKQLPVP+++G+EFQFHSIFVCPVSRDQ S ENPPML+PC HVLCKQSI+KLSK
Sbjct: 301 KQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 360
Query: 1308 NSSRTFKCPYCPLEATVVQCKQLYF 1382
NS+RTFKCPYCP EATV CKQLYF
Sbjct: 361 NSTRTFKCPYCPAEATVANCKQLYF 385
>ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|118480973|gb|ABK92440.1|
unknown [Populus trichocarpa] gi|222849617|gb|EEE87164.1|
predicted protein [Populus trichocarpa]
Length = 384
Score = 537 bits (1384), Expect = e-150
Identities = 262/385 (68%), Positives = 319/385 (82%), Gaps = 1/385 (0%)
Frame = +3
Query: 231 MELGSVRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVHDPASVDNRKSILTE 410
MEL + +DAFDRVA+KQKLS SK QEVIDQV QEIEQAL K+Q+V DP S ++KSILTE
Sbjct: 1 MELTTAKDAFDRVAEKQKLSFSKCQEVIDQVSQEIEQALVKIQSVEDPMSPVDQKSILTE 60
Query: 411 LNNKLKELVPLNQLEGPQKELNVGLSKYTKLLEKIFNPDISKAYRNVDFDNHTINQIIAC 590
L +KL + PL LEG QKELN+ LSK+ K+LEK F PDISKAYR+VDFD H +NQIIA
Sbjct: 61 LKHKLIAISPLKLLEGSQKELNLNLSKFPKVLEKSF-PDISKAYRDVDFDFHIVNQIIAS 119
Query: 591 HFYRQGQFDLGDCFMMEAEEPEVA-LKSPFIEMYQILEAMRSQNLEPAINWAATHRDHLL 767
HFY QG FDLGDC + EA EPE A L+S F+E++QILEAMR +N+EPA+ WA+T+R+ L+
Sbjct: 120 HFYHQGLFDLGDCLINEAGEPEAAALRSHFLELHQILEAMRIKNIEPALKWASTNREKLV 179
Query: 768 QNGSIIELKLHRLQFVKILQNGTRGEALTYARTYLSPFASTHMAEIQKLMACLLWAGRLD 947
QNGS IELKLH+LQFV+IL+ G R +AL YA+T+L+ FAS+H+ E QKL+ C++W GRL+
Sbjct: 180 QNGSNIELKLHQLQFVEILKRGNRADALNYAKTHLASFASSHLKEFQKLIVCIMWIGRLE 239
Query: 948 SSPYAEFLLPTHWENLTEELTQHFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAAK 1127
+ P++E P HWE LTEEL + FCN +GQS +SPL+V I AG++GLPTLLKLANVMAAK
Sbjct: 240 NCPHSELFTPIHWEKLTEELARDFCNFVGQSLQSPLSVAIVAGIEGLPTLLKLANVMAAK 299
Query: 1128 KQEWLAMKQLPVPLDIGREFQFHSIFVCPVSRDQASVENPPMLMPCGHVLCKQSIVKLSK 1307
KQEW A+KQLPVP+++G+EFQFHSIFVCPVSRDQ S ENPPML+PC HVLCKQSI+KLSK
Sbjct: 300 KQEWQALKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 359
Query: 1308 NSSRTFKCPYCPLEATVVQCKQLYF 1382
SSR FKCPYCP EA+ QC+QLYF
Sbjct: 360 GSSRAFKCPYCPAEASAAQCRQLYF 384
>ref|NP_001057959.1| Os06g0588900 [Oryza sativa Japonica Group]
gi|50725427|dbj|BAD32899.1| membrane protein-like [Oryza
sativa Japonica Group] gi|50726574|dbj|BAD34208.1|
membrane protein-like [Oryza sativa Japonica Group]
gi|113595999|dbj|BAF19873.1| Os06g0588900 [Oryza sativa
Japonica Group] gi|125555894|gb|EAZ01500.1| hypothetical
protein OsI_23531 [Oryza sativa Indica Group]
gi|125597714|gb|EAZ37494.1| hypothetical protein
OsJ_21828 [Oryza sativa Japonica Group]
Length = 386
Score = 528 bits (1360), Expect = e-147
Identities = 268/386 (69%), Positives = 308/386 (79%), Gaps = 2/386 (0%)
Frame = +3
Query: 231 MELGSVRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVH-DPASVDNRKSILT 407
MEL S+R+AFDRV +K+ SS+K QEVIDQ+ E+EQA+ K+Q ++ D + SIL
Sbjct: 1 MELDSLREAFDRVIEKRASSSAKAQEVIDQIVSEVEQAITKMQMMNTDSMGTADHSSILA 60
Query: 408 ELNNKLKELVPLNQLEGPQKELNVGLSKYTKLLEKIFNPDISKAYRNVDFDNHTINQIIA 587
EL KL EL PLNQLEG QKELNV LSKY KLLEK F+PDISKAYRNVDF+ TIN IIA
Sbjct: 61 ELKAKLNELAPLNQLEGCQKELNVALSKYLKLLEKSFSPDISKAYRNVDFEASTINSIIA 120
Query: 588 CHFYRQGQFDLGDCFMMEAEEPEVA-LKSPFIEMYQILEAMRSQNLEPAINWAATHRDHL 764
HFYRQG FDLGD F+ E E + A LK F EMY ILEAM+ +NL+PA++WAA + D L
Sbjct: 121 NHFYRQGLFDLGDSFVRECGESDGAHLKLQFQEMYSILEAMQVRNLQPALSWAAKNHDQL 180
Query: 765 LQNGSIIELKLHRLQFVKILQNGTRGEALTYARTYLSPFASTHMAEIQKLMACLLWAGRL 944
LQNGS++ELKLH+LQFV+IL G+R EAL YART+L PFAS H AEIQKLMACLLWA RL
Sbjct: 181 LQNGSMLELKLHQLQFVEILTKGSRDEALKYARTHLVPFASLHKAEIQKLMACLLWADRL 240
Query: 945 DSSPYAEFLLPTHWENLTEELTQHFCNLLGQSYESPLNVVIEAGVQGLPTLLKLANVMAA 1124
D SPYAEF+ THWE L EELT FC+LLGQS ESPL V + AG QGLPTLLKL VMAA
Sbjct: 241 DQSPYAEFMSSTHWEKLAEELTHQFCSLLGQSSESPLGVAVSAGFQGLPTLLKLTTVMAA 300
Query: 1125 KKQEWLAMKQLPVPLDIGREFQFHSIFVCPVSRDQASVENPPMLMPCGHVLCKQSIVKLS 1304
KKQEW AMKQLPVP+DIG EFQ+HS+FVCPV R+Q+S ENPPMLMPCGHV+ KQSI+KLS
Sbjct: 301 KKQEWQAMKQLPVPIDIGPEFQYHSVFVCPVLREQSSDENPPMLMPCGHVVSKQSIMKLS 360
Query: 1305 KNSSRTFKCPYCPLEATVVQCKQLYF 1382
K+SSR FKCPYCP EA QCKQL+F
Sbjct: 361 KSSSRPFKCPYCPSEAVASQCKQLHF 386