BLASTX nr result

ID: Cimicifuga21_contig00005072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005072
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15119.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256...   189   2e-46
emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]   189   2e-46
ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [...   183   1e-44
ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42

>emb|CBI15119.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/118 (79%), Positives = 103/118 (87%)
 Frame = -2

Query: 394 AFFSKVGGLLKQSVTKNISSGLSASNPSIFQAIRCMSSSKIFIGGLSYSTDDQSLKEAFA 215
           AFF KVG +L+Q+V+K ++S  S SNPSI+QAIRCMSSSK+FIGGLSYSTDD SL+EAF 
Sbjct: 2   AFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFH 61

Query: 214 SYGEVIEARVIQDRETGRSRGFGFVTFTSGEEAGKAISALDGQDLHGRRVRVNYANDR 41
            YGEVIEARVI DRETGRSRGFGFVTFTS EEA  AI ALDGQDLHGRRVRVNYA DR
Sbjct: 62  KYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119


>ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
          Length = 277

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/118 (79%), Positives = 103/118 (87%)
 Frame = -2

Query: 394 AFFSKVGGLLKQSVTKNISSGLSASNPSIFQAIRCMSSSKIFIGGLSYSTDDQSLKEAFA 215
           AFF KVG +L+Q+V+K ++S  S SNPSI+QAIRCMSSSK+FIGGLSYSTDD SL+EAF 
Sbjct: 2   AFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFH 61

Query: 214 SYGEVIEARVIQDRETGRSRGFGFVTFTSGEEAGKAISALDGQDLHGRRVRVNYANDR 41
            YGEVIEARVI DRETGRSRGFGFVTFTS EEA  AI ALDGQDLHGRRVRVNYA DR
Sbjct: 62  KYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119


>emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
          Length = 272

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/118 (79%), Positives = 103/118 (87%)
 Frame = -2

Query: 394 AFFSKVGGLLKQSVTKNISSGLSASNPSIFQAIRCMSSSKIFIGGLSYSTDDQSLKEAFA 215
           AFF KVG +L+Q+V+K ++S  S SNPSI+QAIRCMSSSK+FIGGLSYSTDD SL+EAF 
Sbjct: 2   AFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFY 61

Query: 214 SYGEVIEARVIQDRETGRSRGFGFVTFTSGEEAGKAISALDGQDLHGRRVRVNYANDR 41
            YGEVIEARVI DRETGRSRGFGFVTFTS EEA  AI ALDGQDLHGRRVRVNYA DR
Sbjct: 62  KYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119


>ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 267

 Score =  183 bits (465), Expect = 1e-44
 Identities = 92/118 (77%), Positives = 101/118 (85%)
 Frame = -2

Query: 394 AFFSKVGGLLKQSVTKNISSGLSASNPSIFQAIRCMSSSKIFIGGLSYSTDDQSLKEAFA 215
           AF SKVG LL+Q+ TK IS+ LSAS PS+FQAIR MSSSK+F+GG+SY TDD SL+EAF 
Sbjct: 2   AFLSKVGNLLRQTATKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREAFG 61

Query: 214 SYGEVIEARVIQDRETGRSRGFGFVTFTSGEEAGKAISALDGQDLHGRRVRVNYANDR 41
            YGEVIEARVI DRETGRSRGF FVT+TS EEA  AI ALDGQDLHGRRVRVNYANDR
Sbjct: 62  KYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 119


>ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|222859243|gb|EEE96790.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  174 bits (442), Expect = 5e-42
 Identities = 81/118 (68%), Positives = 101/118 (85%)
 Frame = -2

Query: 394 AFFSKVGGLLKQSVTKNISSGLSASNPSIFQAIRCMSSSKIFIGGLSYSTDDQSLKEAFA 215
           AF +K+G +L+Q+ ++ ++S +SAS PSI+QA+RCMSSSK+F+GG+S+ TDD SLKEAF 
Sbjct: 2   AFLTKMGNMLRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAFD 61

Query: 214 SYGEVIEARVIQDRETGRSRGFGFVTFTSGEEAGKAISALDGQDLHGRRVRVNYANDR 41
            YG V+EAR+I DRETGRSRGFGFVT+TS EEA  AI ALDGQDLHGRRVRVNYA +R
Sbjct: 62  KYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATER 119


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