BLASTX nr result

ID: Cimicifuga21_contig00005062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005062
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93118.1| unknown [Populus trichocarpa] gi|118483290|gb|ABK...   135   6e-30
ref|XP_002329360.1| predicted protein [Populus trichocarpa] gi|1...   134   8e-30
ref|XP_002284579.1| PREDICTED: uncharacterized protein LOC100252...   127   1e-27
ref|XP_002319921.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002278870.1| PREDICTED: uncharacterized protein LOC100249...   124   8e-27

>gb|ABK93118.1| unknown [Populus trichocarpa] gi|118483290|gb|ABK93547.1| unknown
           [Populus trichocarpa]
          Length = 100

 Score =  135 bits (339), Expect = 6e-30
 Identities = 61/82 (74%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   RLSSPTTAAQAAKLVQRRGLSGGGDHHGPPRVDFWRDPMSPSKWKEEHFVIISLTGWGLL 181
           R+SSP T AQAA L+ RRGL+G  DHHGPPR++ W+DPMSPSKWKEEHFVI+SL+GWG+L
Sbjct: 17  RISSPKTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMSPSKWKEEHFVIVSLSGWGVL 76

Query: 182 IYSGYKFFTKGK--KEEKPTEA 241
           IY GYKFFT GK  KEEKP EA
Sbjct: 77  IYGGYKFFTGGKSNKEEKPLEA 98


>ref|XP_002329360.1| predicted protein [Populus trichocarpa] gi|118481328|gb|ABK92607.1|
           unknown [Populus trichocarpa]
           gi|118481455|gb|ABK92670.1| unknown [Populus
           trichocarpa] gi|118483232|gb|ABK93519.1| unknown
           [Populus trichocarpa] gi|222870410|gb|EEF07541.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score =  134 bits (338), Expect = 8e-30
 Identities = 61/82 (74%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   RLSSPTTAAQAAKLVQRRGLSGGGDHHGPPRVDFWRDPMSPSKWKEEHFVIISLTGWGLL 181
           R+SSP T AQAA L+ RRGL+G  DHHGPPR++ W+DPMSPSKWKEEHFVI+SL+GWG+L
Sbjct: 17  RVSSPKTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMSPSKWKEEHFVIVSLSGWGVL 76

Query: 182 IYSGYKFFTKGK--KEEKPTEA 241
           IY GYKFFT GK  KEEKP EA
Sbjct: 77  IYGGYKFFTGGKSNKEEKPLEA 98


>ref|XP_002284579.1| PREDICTED: uncharacterized protein LOC100252136 [Vitis vinifera]
           gi|302143071|emb|CBI20366.3| unnamed protein product
           [Vitis vinifera]
          Length = 98

 Score =  127 bits (319), Expect = 1e-27
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = +2

Query: 2   RLSSPTTAAQAAKLVQRRGLSGGGDHHGPPRVDFWRDPMSPSKWKEEHFVIISLTGWGLL 181
           RLSSP  A  A  L+ RRGL+ GGDHHGPP+V+FW+DP+SPSKWKEEHFVI+SL+GWGLL
Sbjct: 16  RLSSP--APLATSLIHRRGLASGGDHHGPPKVNFWQDPLSPSKWKEEHFVIVSLSGWGLL 73

Query: 182 IYSGYKFFTKGKKEEK 229
            Y GYKFFTKGKK+ K
Sbjct: 74  FYGGYKFFTKGKKDNK 89


>ref|XP_002319921.1| predicted protein [Populus trichocarpa] gi|222858297|gb|EEE95844.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  124 bits (312), Expect = 8e-27
 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   RLSSPTTAAQAAKLVQRRGLSGGGDHHGPPRVDFWRDPMSPSKWKEEHFVIISLTGWGLL 181
           R+SSP + AQ A L+ RRGL+G  DHHGP R++ W+DPMSPSKWKEEHFVI+SL+GWGL 
Sbjct: 18  RISSPKSPAQVAALIHRRGLAGAADHHGPSRINCWQDPMSPSKWKEEHFVIVSLSGWGLA 77

Query: 182 IYSGYKFFT--KGKKEEKPTEA 241
            Y GYKFFT  KGK+EEK  EA
Sbjct: 78  FYGGYKFFTGGKGKEEEKVVEA 99


>ref|XP_002278870.1| PREDICTED: uncharacterized protein LOC100249870 isoform 1 [Vitis
           vinifera] gi|359485558|ref|XP_003633290.1| PREDICTED:
           uncharacterized protein LOC100249870 isoform 2 [Vitis
           vinifera] gi|297739274|emb|CBI28925.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score =  124 bits (312), Expect = 8e-27
 Identities = 56/83 (67%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = +2

Query: 2   RLSSPTTAAQAAKLVQRRGLSGGGDHHGPPRVDFWRDPMSPSKWKEEHFVIISLTGWGLL 181
           RLSS   + Q+A L+QRRGL+G  DHHGPPR++ W DPMSPSKWKEEHFVI+SL+GWGLL
Sbjct: 17  RLSSAKPSPQSANLIQRRGLAGAADHHGPPRINVWEDPMSPSKWKEEHFVIVSLSGWGLL 76

Query: 182 IYSGYKFFTKGK--KEEKPTEAT 244
            +  YKFFT+GK  KEEK  EA+
Sbjct: 77  FFGSYKFFTRGKKDKEEKLVEAS 99


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