BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005048
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34828.3| unnamed protein product [Vitis vinifera]              353   5e-95
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   348   1e-93
emb|CBI14910.3| unnamed protein product [Vitis vinifera]              326   7e-87
ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   323   8e-86
ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|1...   317   4e-84

>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  353 bits (906), Expect = 5e-95
 Identities = 184/274 (67%), Positives = 209/274 (76%), Gaps = 2/274 (0%)
 Frame = +1

Query: 106 MANSCLTSHPT-LFITKASYPFLSFPSKSIKLIHXXXXXXXXXXXXXXXXXXX-VIPFVA 279
           MA SCLTS PT LF TK  +P LS P K ++L H                    ++PFVA
Sbjct: 1   MAESCLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVA 60

Query: 280 QTSDWAQQENQVXXXXXXXXXXXPVSDWSEPSEEAKLFVGNLPYDMTSEQLAQLFDQAGT 459
           QTSDWAQQE +                +SEP EEAKLFVGNLPYD+ SE+LAQLFD+AG 
Sbjct: 61  QTSDWAQQEEEEEKDGEESEGSEDT--YSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGV 118

Query: 460 VNIAEVIYNRDTDQSRGFAFVTMETPEESAKAVDMFNGYDINGRLLTVNKAAPRGSRPER 639
           V IAEVIYNR+TDQSRGF F+TM T EE+ KAV+MFN YD+NGR LTVNKAAPRGSRPER
Sbjct: 119 VEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPER 178

Query: 640 PARAFDTSLRIYVGNLPWQVDNARLEQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSSQ 819
           P +AF+ S RIYVGNLPWQVD+ARLEQVFSEHGKVVDARVVYDR+T RSRGFGFVTMSS+
Sbjct: 179 PPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSE 238

Query: 820 TDVDDAIGALDGQSLEGRTIRVNVAEERPRRNSF 921
           T+++DAI ALDGQSL+GR IRVNVAEERPRR S+
Sbjct: 239 TELNDAIAALDGQSLDGRAIRVNVAEERPRRGSY 272


>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score =  348 bits (894), Expect = 1e-93
 Identities = 188/311 (60%), Positives = 219/311 (70%), Gaps = 28/311 (9%)
 Frame = +1

Query: 73  SATTSLFKLTSMANSCLTSHPT-LFITKASYPFLSFPSKSIKLIHXXXXXXXXXXXXXXX 249
           +++ +L K  SMA SCLTS PT LF TK  +P LS P K ++L H               
Sbjct: 2   ASSNALLKPFSMAESCLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTK 61

Query: 250 XXXX-VIPFVAQTSDWAQQENQ---------------VXXXXXXXXXXXPVSD------- 360
                ++PFVAQTSDWAQQE +               +            V +       
Sbjct: 62  TSPTTLVPFVAQTSDWAQQEEEEEKGGLTWDSEGGEEIEASGSEEAWEGEVGEDGEESEG 121

Query: 361 ----WSEPSEEAKLFVGNLPYDMTSEQLAQLFDQAGTVNIAEVIYNRDTDQSRGFAFVTM 528
               +SEP EEAKLFVGNLPYD+ SE+LAQLFD+AG V IAEVIYNR+TDQSRGF F+TM
Sbjct: 122 SEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITM 181

Query: 529 ETPEESAKAVDMFNGYDINGRLLTVNKAAPRGSRPERPARAFDTSLRIYVGNLPWQVDNA 708
            T EE+ KAV+MFN YD+NGR LTVNKAAPRGSRPERP +AF+ S RIYVGNLPWQVD+A
Sbjct: 182 STVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDA 241

Query: 709 RLEQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSSQTDVDDAIGALDGQSLEGRTIRVN 888
           RLEQVFSEHGKVVDARVVYDR+T RSRGFGFVTMSS+T+++DAI ALDGQSL+GR IRVN
Sbjct: 242 RLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVN 301

Query: 889 VAEERPRRNSF 921
           VAEERPRR S+
Sbjct: 302 VAEERPRRGSY 312


>emb|CBI14910.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  326 bits (836), Expect = 7e-87
 Identities = 179/306 (58%), Positives = 215/306 (70%), Gaps = 21/306 (6%)
 Frame = +1

Query: 67  MSSATTSLFKLTSMANSCLTSHPTLFITKASYPFLSFPS-KSIKLI---HXXXXXXXXXX 234
           MSSAT  L K  S+ N    S PT+F TK  + +L  P  K IKL+              
Sbjct: 1   MSSATHHLLKPFSIPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPSLF 60

Query: 235 XXXXXXXXXVIPFVAQTSDWAQQEN-------QVXXXXXXXXXXXPVSD----------W 363
                    V+ FVAQTSDWAQQE        +             +SD          +
Sbjct: 61  LKSKTLSSSVVTFVAQTSDWAQQEEDNTVIIEEEQEEKVTWENEEAISDDGVVDDGEDSY 120

Query: 364 SEPSEEAKLFVGNLPYDMTSEQLAQLFDQAGTVNIAEVIYNRDTDQSRGFAFVTMETPEE 543
           SEP EEAK+FVGNLPYD+ SE+LA+LF+QAG V IAEVIYNR+TD+SRGF FV+M T EE
Sbjct: 121 SEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEE 180

Query: 544 SAKAVDMFNGYDINGRLLTVNKAAPRGSRPERPARAFDTSLRIYVGNLPWQVDNARLEQV 723
           + KAVDMF+ Y+++GRLLTVNKAAPRGS+PERP R F+ + R+YVGNLPW VD+ARLEQV
Sbjct: 181 AEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQV 240

Query: 724 FSEHGKVVDARVVYDRETGRSRGFGFVTMSSQTDVDDAIGALDGQSLEGRTIRVNVAEER 903
           FSEHGKVV+ARVV+DRETGRSRGFGFVTMSSQT+++DAI A DGQ+L+GRTIRVNVAEER
Sbjct: 241 FSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEER 300

Query: 904 PRRNSF 921
           PRR++F
Sbjct: 301 PRRSAF 306


>ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 299

 Score =  323 bits (827), Expect = 8e-86
 Identities = 171/298 (57%), Positives = 211/298 (70%), Gaps = 11/298 (3%)
 Frame = +1

Query: 61  SIMSSATTSLFKLTSMANSCLTSHPTLFITKASYPFLSFPSKSIKLIHXXXXXXXXXXXX 240
           S+MS  T + FK  +MA SCL S P+LF  K +   LS P+K + L              
Sbjct: 2   SMMSLTTVAAFKSLTMAESCLLSLPSLFYAKNNTLSLSIPTKPLNLHLPCSNSSLFPLTT 61

Query: 241 XXXXXXXVIPFVAQTSDWAQQE--------NQVXXXXXXXXXXXPVSDWSEPSEEAKLFV 396
                  ++ FVAQTSDWA++E        NQ                ++E +EE K+FV
Sbjct: 62  KTTRHSSLLTFVAQTSDWAKEEEEEETSWENQGDTAWGTEEGGHEEGGFAEKAEEDKIFV 121

Query: 397 GNLPYDMTSEQLAQLFDQAGTVNIAEVIYNRDTDQSRGFAFVTMETPEESAKAVDMFNGY 576
           GNLP+D+ SE LA LF QAGTV +AEVIYNR TD+SRGF FVTM T EE  KAV+MF+GY
Sbjct: 122 GNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVEMFSGY 181

Query: 577 DINGRLLTVNKAAPRGSRPERPAR---AFDTSLRIYVGNLPWQVDNARLEQVFSEHGKVV 747
           ++NGR+LTVNKAAP+G++PERP R   +F + LR+YVGNLPW+VD+ARLEQ+FSEHGKV 
Sbjct: 182 ELNGRVLTVNKAAPKGAQPERPPRPPRSFSSGLRVYVGNLPWEVDDARLEQIFSEHGKVE 241

Query: 748 DARVVYDRETGRSRGFGFVTMSSQTDVDDAIGALDGQSLEGRTIRVNVAEERPRRNSF 921
           DARVVYDRETGRSRGFGFVTMSS+TD++DAI ALDGQSL+GR IRVNVA++RP R+SF
Sbjct: 242 DARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVAQDRPSRSSF 299


>ref|XP_002298568.1| predicted protein [Populus trichocarpa] gi|118486956|gb|ABK95311.1|
           unknown [Populus trichocarpa]
           gi|222845826|gb|EEE83373.1| predicted protein [Populus
           trichocarpa]
          Length = 276

 Score =  317 bits (812), Expect = 4e-84
 Identities = 164/263 (62%), Positives = 192/263 (73%), Gaps = 1/263 (0%)
 Frame = +1

Query: 136 TLFITKASYPFLSFPSKSIKLIHXXXXXXXXXXXXXXXXXXXVIPFVAQTSDWAQQ-ENQ 312
           T+F T    PF+S  SK IK++                     IP VAQTSDWAQQ E  
Sbjct: 15  TVFDTSIKSPFISITSKPIKVVFSTSFPSWVSLKTSNFSTFNTIPLVAQTSDWAQQDEED 74

Query: 313 VXXXXXXXXXXXPVSDWSEPSEEAKLFVGNLPYDMTSEQLAQLFDQAGTVNIAEVIYNRD 492
                           + EP EEAKL+VGNLPYD+ SE LAQLFDQAGTV +AE+IYNR+
Sbjct: 75  TVTLGEESFGDGSEETFPEPPEEAKLYVGNLPYDVNSENLAQLFDQAGTVEVAEIIYNRE 134

Query: 493 TDQSRGFAFVTMETPEESAKAVDMFNGYDINGRLLTVNKAAPRGSRPERPARAFDTSLRI 672
           TDQSRGF FVTM T +E+ KA++ F+ YD+NGR LTVNKAAPRGSRPERP+  F  + RI
Sbjct: 135 TDQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGRFLTVNKAAPRGSRPERPS-VFKIAYRI 193

Query: 673 YVGNLPWQVDNARLEQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSSQTDVDDAIGALD 852
           YVGNLPWQVD+ARLEQVFSEHG+VV+ARVV DRETGRSRGFGFVTMSS+T+++DAI ALD
Sbjct: 194 YVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRGFGFVTMSSETELNDAIAALD 253

Query: 853 GQSLEGRTIRVNVAEERPRRNSF 921
           GQSL+GR I VN+A+ERPRR SF
Sbjct: 254 GQSLDGRAITVNIAQERPRRGSF 276