BLASTX nr result

ID: Cimicifuga21_contig00005025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005025
         (1570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   740   0.0  
ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   737   0.0  
dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]                          735   0.0  
ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|2...   735   0.0  
ref|XP_002871462.1| hypothetical protein ARALYDRAFT_487950 [Arab...   733   0.0  

>ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera]
            gi|297743441|emb|CBI36308.3| unnamed protein product
            [Vitis vinifera]
          Length = 428

 Score =  740 bits (1910), Expect = 0.0
 Identities = 372/399 (93%), Positives = 383/399 (95%)
 Frame = -1

Query: 1567 TKTGNESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVIC 1388
            +K   ESAKKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSEVQHECIPQAILGMDVIC
Sbjct: 30   SKAAGESAKKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSEVQHECIPQAILGMDVIC 89

Query: 1387 QAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICNEFERFSTYLPDIKVAV 1208
            QAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQIC+EFERFSTYLPDIKVAV
Sbjct: 90   QAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAV 149

Query: 1207 FYGGVSIKTHKDLLKNECPHIVVGTPGRVXXXXXXXXXXXKNVRHFILDECDKMLESLDM 1028
            FYGGVSIKTHKDLLKNECPHIVVGTPGR+           K+VRHFILDECDKMLESLDM
Sbjct: 150  FYGGVSIKTHKDLLKNECPHIVVGTPGRILALARDKDLGLKHVRHFILDECDKMLESLDM 209

Query: 1027 RKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI 848
            R+DVQ+IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI
Sbjct: 210  RRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI 269

Query: 847  KLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERL 668
            KL+ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL+ECNFPSICIHSGM QEERL
Sbjct: 270  KLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLMECNFPSICIHSGMPQEERL 329

Query: 667  TRYKSFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLA 488
            TRYK+FKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLA
Sbjct: 330  TRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLA 389

Query: 487  ITFVSSASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 371
            ITFVSSASDS+VLNQVQERFEVDIKELPEQIDTSTYMPS
Sbjct: 390  ITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 428


>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
            vinifera]
          Length = 428

 Score =  737 bits (1903), Expect = 0.0
 Identities = 371/398 (93%), Positives = 379/398 (95%)
 Frame = -1

Query: 1564 KTGNESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ 1385
            K   E+AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ
Sbjct: 31   KVNGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ 90

Query: 1384 AKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICNEFERFSTYLPDIKVAVF 1205
            AKSGMGKTAVFVLSTLQQIEPV GQVAALVLCHTRELAYQIC+EFERFSTYLPDIKVAVF
Sbjct: 91   AKSGMGKTAVFVLSTLQQIEPVTGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVF 150

Query: 1204 YGGVSIKTHKDLLKNECPHIVVGTPGRVXXXXXXXXXXXKNVRHFILDECDKMLESLDMR 1025
            YGGV+IK HKDLLKNECPHIVVGTPGR+           KNVRHFILDECDKMLESLDMR
Sbjct: 151  YGGVNIKIHKDLLKNECPHIVVGTPGRILALARDKDLALKNVRHFILDECDKMLESLDMR 210

Query: 1024 KDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK 845
            +DVQ+IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK
Sbjct: 211  RDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK 270

Query: 844  LTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 665
            L+ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM QEERLT
Sbjct: 271  LSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMPQEERLT 330

Query: 664  RYKSFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 485
            RYK FKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI
Sbjct: 331  RYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 390

Query: 484  TFVSSASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 371
            TFVSSASDS+VLNQVQERFEVDIKELPEQIDTSTYMPS
Sbjct: 391  TFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 428


>dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]
          Length = 455

 Score =  735 bits (1898), Expect = 0.0
 Identities = 372/411 (90%), Positives = 385/411 (93%), Gaps = 2/411 (0%)
 Frame = -1

Query: 1564 KTGNESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ 1385
            K G ESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ
Sbjct: 31   KAGAESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ 90

Query: 1384 AKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICNEFERFSTYLPDIKVAVF 1205
            AKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQIC+EFERFSTYLPDIKVAVF
Sbjct: 91   AKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVF 150

Query: 1204 YGGVSIKTHKDLLKNECPHIVVGTPGRVXXXXXXXXXXXKNVRHFILDECDKMLESLDMR 1025
            YGGV+IK HKD+LKNECPHIVVGTPGR+           KNVRHFILDECDKMLESLDMR
Sbjct: 151  YGGVNIKVHKDILKNECPHIVVGTPGRILALARDKDLGLKNVRHFILDECDKMLESLDMR 210

Query: 1024 KDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK 845
            +DVQ+IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK
Sbjct: 211  RDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK 270

Query: 844  LTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 665
            LTE+EKNRKLNDLLDALDFNQVVIFVKSV+RAAELNKLLVECNFPSICIHSGMSQEERLT
Sbjct: 271  LTEMEKNRKLNDLLDALDFNQVVIFVKSVNRAAELNKLLVECNFPSICIHSGMSQEERLT 330

Query: 664  RYKSFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 485
            RYK FKEG KRILVATDLVGRGIDIERVNIV+NYDMPDSADTYLHRVGRAGRFGTKGLAI
Sbjct: 331  RYKGFKEGHKRILVATDLVGRGIDIERVNIVVNYDMPDSADTYLHRVGRAGRFGTKGLAI 390

Query: 484  TFVSSASDSEVLNQVQERFEVDIKELPEQIDTSTY--MPS*CHHYVHLWRW 338
            TFVSSASDS+VLNQVQ RFEVDIKELPEQIDTSTY  MPS  +   ++  W
Sbjct: 391  TFVSSASDSDVLNQVQARFEVDIKELPEQIDTSTYSKMPSSFYFGFNILLW 441


>ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|222855599|gb|EEE93146.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  735 bits (1898), Expect = 0.0
 Identities = 369/400 (92%), Positives = 378/400 (94%)
 Frame = -1

Query: 1570 GTKTGNESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVI 1391
            G K   E+ KKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSEVQHECIPQAILGMDVI
Sbjct: 29   GAKVNGEAVKKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSEVQHECIPQAILGMDVI 88

Query: 1390 CQAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICNEFERFSTYLPDIKVA 1211
            CQAKSGMGKTAVFVLSTLQQIEP +GQV ALVLCHTRELAYQIC+EFERFSTYLPD KVA
Sbjct: 89   CQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQICHEFERFSTYLPDTKVA 148

Query: 1210 VFYGGVSIKTHKDLLKNECPHIVVGTPGRVXXXXXXXXXXXKNVRHFILDECDKMLESLD 1031
            VFYGGV+IKTHKDLLKNECPHIVVGTPGR+           KNVRHFILDECDKMLESLD
Sbjct: 149  VFYGGVNIKTHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLD 208

Query: 1030 MRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 851
            MR+DVQ+IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY
Sbjct: 209  MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 268

Query: 850  IKLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 671
            IKLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER
Sbjct: 269  IKLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 328

Query: 670  LTRYKSFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 491
            L RYK FKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 329  LMRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 388

Query: 490  AITFVSSASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 371
            AITFVSSASDS+VLNQVQERFEVDIKELPEQIDTSTYMPS
Sbjct: 389  AITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 428


>ref|XP_002871462.1| hypothetical protein ARALYDRAFT_487950 [Arabidopsis lyrata subsp.
            lyrata] gi|297317299|gb|EFH47721.1| hypothetical protein
            ARALYDRAFT_487950 [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score =  733 bits (1893), Expect = 0.0
 Identities = 369/400 (92%), Positives = 378/400 (94%)
 Frame = -1

Query: 1570 GTKTGNESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVI 1391
            G K   E+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVI
Sbjct: 28   GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVI 87

Query: 1390 CQAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICNEFERFSTYLPDIKVA 1211
            CQAKSGMGKTAVFVLSTLQQIEP  GQV+ALVLCHTRELAYQICNEF RFSTYLPD KV+
Sbjct: 88   CQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVS 147

Query: 1210 VFYGGVSIKTHKDLLKNECPHIVVGTPGRVXXXXXXXXXXXKNVRHFILDECDKMLESLD 1031
            VFYGGV+IK HKDLLKNECPHIVVGTPGRV           KNVRHFILDECDKMLESLD
Sbjct: 148  VFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALARDKDLSLKNVRHFILDECDKMLESLD 207

Query: 1030 MRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 851
            MR+DVQ+IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY
Sbjct: 208  MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 267

Query: 850  IKLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 671
            IKL+E+EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER
Sbjct: 268  IKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 327

Query: 670  LTRYKSFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 491
            LTRYKSFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 328  LTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387

Query: 490  AITFVSSASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 371
            AITFV+SASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS
Sbjct: 388  AITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 427


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