BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005024
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chl...   382   e-104
ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   376   e-102
ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   374   e-101
gb|ACU18621.1| unknown [Glycine max]                                  373   e-101
emb|CBI28372.3| unnamed protein product [Vitis vinifera]              372   e-101

>ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Vitis
           vinifera]
          Length = 299

 Score =  382 bits (982), Expect = e-104
 Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 3/275 (1%)
 Frame = -2

Query: 818 MASISSLPFIASGKASDVKVSVSAXXXXXXXXXXXXXXXNLVSKSFDIRRSNSSS---IK 648
           MA+++SL F A G++S+ KV V                 N  +       S+SSS   ++
Sbjct: 1   MAAVTSLSFSALGQSSERKVPVPTTRSFASAFEAFRFRANFYAVGVRSSSSSSSSRMVVQ 60

Query: 647 CMSSVTDVPPVSETKMNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYCYDAVFALGF 468
           CMSSVTDVP VSETKMNFLK YKRPIPSIYNT+LQEL+VQQHLMRYK+TY YDAVFALGF
Sbjct: 61  CMSSVTDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHLMRYKRTYRYDAVFALGF 120

Query: 467 VTVYDKLMEGYTSDEDREAIFRAYIEALKEDPEQYRKDAQKLEEWARTQTATSLIDFSSR 288
           VTVYD+LM+GY SDEDR+ IF+ YI+AL+EDPEQYRKDAQ LEEWAR+QTA+SL++FSS+
Sbjct: 121 VTVYDQLMDGYPSDEDRDIIFQVYIKALREDPEQYRKDAQMLEEWARSQTASSLVEFSSK 180

Query: 287 EGEVEGLLKNISERAGGNGSFSYSRFFAIGLFRLLELANATEPTILEKLCAALNINKRSV 108
           EGEVEG+LK+I+ERAGG GSFSYSRFFAIGLFRLLELANATEPTILEKLCAA NI+KRSV
Sbjct: 181 EGEVEGILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPTILEKLCAAFNISKRSV 240

Query: 107 DRDLDVYRNLLSKLVQAKELLKEFLDREKKKLAER 3
           DRDLDVYRNLL+KLVQAKELLKE++DREKKK  ER
Sbjct: 241 DRDLDVYRNLLTKLVQAKELLKEYVDREKKKREER 275


>ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score =  376 bits (966), Expect = e-102
 Identities = 197/276 (71%), Positives = 227/276 (82%), Gaps = 4/276 (1%)
 Frame = -2

Query: 818 MASISSLPFIASGKASDVKVSVSAXXXXXXXXXXXXXXXNLVSKSFDIRRSNSSS---IK 648
           MA+++SL F A    S+ KV++S+               +       +R SNS S   ++
Sbjct: 1   MAALTSLSFSAVTHCSERKVTLSSTRFLASSSEIFGFRTDFSYHYVGVRASNSPSKMVVQ 60

Query: 647 CMSSVTDVPP-VSETKMNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYCYDAVFALG 471
           CMSS TDVPP VSETK+NFLKAYKRPIPSIYNTVLQELIVQQHLM+YK++Y YD VFALG
Sbjct: 61  CMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFALG 120

Query: 470 FVTVYDKLMEGYTSDEDREAIFRAYIEALKEDPEQYRKDAQKLEEWARTQTATSLIDFSS 291
           FVT+YDKLMEGY SDEDR+AIF+AYI+ALKEDPEQYR DA+KLEEWAR Q  TSL++FSS
Sbjct: 121 FVTIYDKLMEGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQKPTSLVEFSS 180

Query: 290 REGEVEGLLKNISERAGGNGSFSYSRFFAIGLFRLLELANATEPTILEKLCAALNINKRS 111
           +EGEVEG+LK+I+ERAGG G FSYSRFFA+GLFRLLELANATEPTIL+KLC ALNINKRS
Sbjct: 181 KEGEVEGILKDIAERAGGKGEFSYSRFFAVGLFRLLELANATEPTILDKLCVALNINKRS 240

Query: 110 VDRDLDVYRNLLSKLVQAKELLKEFLDREKKKLAER 3
           VDRDLDVYR LLSKLVQAKELLKE++DREKKK  ER
Sbjct: 241 VDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDER 276


>ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score =  374 bits (959), Expect = e-101
 Identities = 195/276 (70%), Positives = 228/276 (82%), Gaps = 4/276 (1%)
 Frame = -2

Query: 818 MASISSLPFIASGKASDVKVSVSAXXXXXXXXXXXXXXXNLVSKSFDIRRSNSSS---IK 648
           MA+++SL F A    S+ KV++S+               +       +R SNS+S   ++
Sbjct: 1   MAALTSLSFSAVTHCSERKVTLSSTRFLASSSELFGFRTDFSYHYVGVRASNSASKMVVQ 60

Query: 647 CMSSVTDVPP-VSETKMNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYCYDAVFALG 471
           CMSS TDVPP VSETK+NFLKAYKRPIPSIYNTVLQELIVQQHLM+YK++Y YD VFALG
Sbjct: 61  CMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFALG 120

Query: 470 FVTVYDKLMEGYTSDEDREAIFRAYIEALKEDPEQYRKDAQKLEEWARTQTATSLIDFSS 291
           FVT+YDKLMEGY SDEDR+AIF+AYI+ALKEDPEQYR DA+KLEEWAR Q+ TSL++FSS
Sbjct: 121 FVTIYDKLMEGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQSPTSLVEFSS 180

Query: 290 REGEVEGLLKNISERAGGNGSFSYSRFFAIGLFRLLELANATEPTILEKLCAALNINKRS 111
           +EGE E +LK+I+ERAGG G FSYSRFFA+GLFRL+ELANATEPTIL+KLCAALNINKRS
Sbjct: 181 KEGEAERILKDIAERAGGKGEFSYSRFFAVGLFRLVELANATEPTILDKLCAALNINKRS 240

Query: 110 VDRDLDVYRNLLSKLVQAKELLKEFLDREKKKLAER 3
           VDRDLDVYR LLSKLVQAKELLKE++DREKKK  ER
Sbjct: 241 VDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDER 276


>gb|ACU18621.1| unknown [Glycine max]
          Length = 297

 Score =  373 bits (957), Expect = e-101
 Identities = 195/276 (70%), Positives = 228/276 (82%), Gaps = 4/276 (1%)
 Frame = -2

Query: 818 MASISSLPFIASGKASDVKVSVSAXXXXXXXXXXXXXXXNLVSKSFDIRRSNSSS---IK 648
           MA+++SL F A    S+ KV++S+               +       +R SNS+S   ++
Sbjct: 1   MAALTSLSFSAVIHCSERKVTLSSTRFLASSSELFGFRTDFSYHYVGVRASNSASKMVVQ 60

Query: 647 CMSSVTDVPP-VSETKMNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYCYDAVFALG 471
           CMSS TDVPP VSETK+NFLKAYKRPIPSIYNTVLQELIVQQHLM+YK++Y YD VFALG
Sbjct: 61  CMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFALG 120

Query: 470 FVTVYDKLMEGYTSDEDREAIFRAYIEALKEDPEQYRKDAQKLEEWARTQTATSLIDFSS 291
           FVT+YDKLMEGY SDEDR+AIF+AYI+ALKEDPEQYR DA+KLEEWAR Q+ TSL++FSS
Sbjct: 121 FVTIYDKLMEGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQSPTSLVEFSS 180

Query: 290 REGEVEGLLKNISERAGGNGSFSYSRFFAIGLFRLLELANATEPTILEKLCAALNINKRS 111
           +EGE E +LK+I+ERAGG G FSYSRFFA+GLFRL+ELANATEPTIL+KLCAALNINKRS
Sbjct: 181 KEGEAERILKDIAERAGGKGEFSYSRFFAVGLFRLVELANATEPTILDKLCAALNINKRS 240

Query: 110 VDRDLDVYRNLLSKLVQAKELLKEFLDREKKKLAER 3
           VDRDLDVYR LLSKLVQAKELLKE++DREKKK  ER
Sbjct: 241 VDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDER 276


>emb|CBI28372.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  372 bits (955), Expect = e-101
 Identities = 183/217 (84%), Positives = 206/217 (94%)
 Frame = -2

Query: 653 IKCMSSVTDVPPVSETKMNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYCYDAVFAL 474
           ++CMSSVTDVP VSETKMNFLK YKRPIPSIYNT+LQEL+VQQHLMRYK+TY YDAVFAL
Sbjct: 3   VQCMSSVTDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHLMRYKRTYRYDAVFAL 62

Query: 473 GFVTVYDKLMEGYTSDEDREAIFRAYIEALKEDPEQYRKDAQKLEEWARTQTATSLIDFS 294
           GFVTVYD+LM+GY SDEDR+ IF+ YI+AL+EDPEQYRKDAQ LEEWAR+QTA+SL++FS
Sbjct: 63  GFVTVYDQLMDGYPSDEDRDIIFQVYIKALREDPEQYRKDAQMLEEWARSQTASSLVEFS 122

Query: 293 SREGEVEGLLKNISERAGGNGSFSYSRFFAIGLFRLLELANATEPTILEKLCAALNINKR 114
           S+EGEVEG+LK+I+ERAGG GSFSYSRFFAIGLFRLLELANATEPTILEKLCAA NI+KR
Sbjct: 123 SKEGEVEGILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPTILEKLCAAFNISKR 182

Query: 113 SVDRDLDVYRNLLSKLVQAKELLKEFLDREKKKLAER 3
           SVDRDLDVYRNLL+KLVQAKELLKE++DREKKK  ER
Sbjct: 183 SVDRDLDVYRNLLTKLVQAKELLKEYVDREKKKREER 219