BLASTX nr result

ID: Cimicifuga21_contig00005012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005012
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552205.1| PREDICTED: PRA1 family protein A1-like [Glyc...   340   1e-92
gb|ACF87851.1| unknown [Zea mays] gi|195652519|gb|ACG45727.1| PR...   344   2e-92
ref|XP_002458760.1| hypothetical protein SORBIDRAFT_03g039810 [S...   343   2e-92
ref|NP_001237681.1| uncharacterized protein LOC100527037 [Glycin...   338   2e-92
ref|XP_003568326.1| PREDICTED: PRA1 family protein A3-like [Brac...   343   3e-92

>ref|XP_003552205.1| PREDICTED: PRA1 family protein A1-like [Glycine max]
          Length = 209

 Score =  340 bits (871), Expect(2) = 1e-92
 Identities = 166/205 (80%), Positives = 178/205 (86%)
 Frame = +1

Query: 280 NVTAEDLMDALREVDWSSPPRPLPEFFSRFTIPRSYSKWNSRLKCNLYYYRTNYXXXXXX 459
           NVTAEDL+DALREVDWSSPPRPL EFFSRFT+PRS SKWNSRLKCNLYYYRTNY      
Sbjct: 5   NVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSSKWNSRLKCNLYYYRTNYFILIVS 64

Query: 460 XXXXXXXRRPLAIVAAILTGLSIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKMRPPITPV 639
                  RRPLAIVAA+LT LSIAFLNDSFA TF+EKVTRTVRQFSPHLAAKMRPP+TPV
Sbjct: 65  VLILGFLRRPLAIVAALLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPPLTPV 124

Query: 640 IRGRPSSKRAIHICGRPRWMFVMVLSAGSCILWFTSCSLLTVLLAFVVGLLATVLHASFR 819
           IRGRPSSKRAI+ICGRPRW+FV++ S+ S  LWF S  LLTVL A  +GLLAT+LHASFR
Sbjct: 125 IRGRPSSKRAIYICGRPRWVFVLIFSSASFFLWFVSAGLLTVLWALAIGLLATILHASFR 184

Query: 820 TPNLKARLNTFREEFRAVWRNYSEL 894
           TPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 185 TPNLKARLNTFREEFRAVWRNYSEL 209



 Score = 28.5 bits (62), Expect(2) = 1e-92
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +2

Query: 200 MDWGNVTAEDL 232
           MDWGNVTAEDL
Sbjct: 1   MDWGNVTAEDL 11


>gb|ACF87851.1| unknown [Zea mays] gi|195652519|gb|ACG45727.1| PRA1 family protein
           [Zea mays] gi|413949047|gb|AFW81696.1| PRA1 family
           isoform 1 [Zea mays] gi|413949048|gb|AFW81697.1| PRA1
           family isoform 2 [Zea mays]
          Length = 209

 Score =  344 bits (883), Expect(2) = 2e-92
 Identities = 166/204 (81%), Positives = 179/204 (87%)
 Frame = +1

Query: 283 VTAEDLMDALREVDWSSPPRPLPEFFSRFTIPRSYSKWNSRLKCNLYYYRTNYXXXXXXX 462
           VTAEDL+DALREVDWS PPRP+PEFFSRFT+PRSYSKW SRLKCNLYYYRTNY       
Sbjct: 6   VTAEDLVDALREVDWSMPPRPVPEFFSRFTVPRSYSKWTSRLKCNLYYYRTNYFILIMFI 65

Query: 463 XXXXXXRRPLAIVAAILTGLSIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKMRPPITPVI 642
                  +P+AIVAA +TGLSIAFLNDSFAVTFNEKVTRTVRQFSPHLAAK+RPPITPV+
Sbjct: 66  LGMGFLWKPVAIVAAFMTGLSIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKLRPPITPVL 125

Query: 643 RGRPSSKRAIHICGRPRWMFVMVLSAGSCILWFTSCSLLTVLLAFVVGLLATVLHASFRT 822
           RGRPSSKR+IHICGRPRW+FV+  SA SCILW TSCSLLTVL A ++ L ATVLHASFRT
Sbjct: 126 RGRPSSKRSIHICGRPRWVFVLFFSAVSCILWLTSCSLLTVLWALLIALFATVLHASFRT 185

Query: 823 PNLKARLNTFREEFRAVWRNYSEL 894
           PNLKARLNTFREEFRAVWRNYSEL
Sbjct: 186 PNLKARLNTFREEFRAVWRNYSEL 209



 Score = 23.1 bits (48), Expect(2) = 2e-92
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 200 MDWGNVTAEDL 232
           MDW  VTAEDL
Sbjct: 1   MDWSAVTAEDL 11


>ref|XP_002458760.1| hypothetical protein SORBIDRAFT_03g039810 [Sorghum bicolor]
           gi|241930735|gb|EES03880.1| hypothetical protein
           SORBIDRAFT_03g039810 [Sorghum bicolor]
          Length = 209

 Score =  343 bits (879), Expect(2) = 2e-92
 Identities = 163/205 (79%), Positives = 182/205 (88%)
 Frame = +1

Query: 280 NVTAEDLMDALREVDWSSPPRPLPEFFSRFTIPRSYSKWNSRLKCNLYYYRTNYXXXXXX 459
           +VTAEDL+DALREVDWS+PPRP+ EFFSRFT PRSYSKW SRLKCNLYYYRTNY      
Sbjct: 5   SVTAEDLVDALREVDWSTPPRPVSEFFSRFTAPRSYSKWTSRLKCNLYYYRTNYFILIIF 64

Query: 460 XXXXXXXRRPLAIVAAILTGLSIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKMRPPITPV 639
                  R+P+AI+AA+ TGLSIAFLNDSFAVTFNEK+TR+VRQFSPHLAAKMRPPITPV
Sbjct: 65  LLGMGFLRKPVAILAALATGLSIAFLNDSFAVTFNEKITRSVRQFSPHLAAKMRPPITPV 124

Query: 640 IRGRPSSKRAIHICGRPRWMFVMVLSAGSCILWFTSCSLLTVLLAFVVGLLATVLHASFR 819
           IRGRPS +R+IHICGRPRW+FV++ SA SC+LW TSCSLLTVL A ++GLLAT+LHASFR
Sbjct: 125 IRGRPSKRRSIHICGRPRWIFVLLFSAVSCVLWLTSCSLLTVLWALLIGLLATLLHASFR 184

Query: 820 TPNLKARLNTFREEFRAVWRNYSEL 894
           TPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 185 TPNLKARLNTFREEFRAVWRNYSEL 209



 Score = 24.3 bits (51), Expect(2) = 2e-92
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 200 MDWGNVTAEDL 232
           MDW +VTAEDL
Sbjct: 1   MDWSSVTAEDL 11


>ref|NP_001237681.1| uncharacterized protein LOC100527037 [Glycine max]
           gi|255631416|gb|ACU16075.1| unknown [Glycine max]
          Length = 209

 Score =  338 bits (868), Expect(2) = 2e-92
 Identities = 165/205 (80%), Positives = 178/205 (86%)
 Frame = +1

Query: 280 NVTAEDLMDALREVDWSSPPRPLPEFFSRFTIPRSYSKWNSRLKCNLYYYRTNYXXXXXX 459
           NVTAEDL+DALREVDWSSPPRPL EFFSRFT+PRS SKWNSRLKCNLYYYRTNY      
Sbjct: 5   NVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSSKWNSRLKCNLYYYRTNYFILIVS 64

Query: 460 XXXXXXXRRPLAIVAAILTGLSIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKMRPPITPV 639
                  RRPLAIVAA+LT L+IAFLNDSFA TF+EKVTRTVRQFSPHLAAKMRPP+TPV
Sbjct: 65  VLILGFLRRPLAIVAALLTALNIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPPLTPV 124

Query: 640 IRGRPSSKRAIHICGRPRWMFVMVLSAGSCILWFTSCSLLTVLLAFVVGLLATVLHASFR 819
           IRGRPSSKRAI+ICGRPRW+FV++ S+ S  LWF S  LLTVL A  +GLLAT+LHASFR
Sbjct: 125 IRGRPSSKRAIYICGRPRWVFVLIFSSASFFLWFVSAGLLTVLWALAIGLLATILHASFR 184

Query: 820 TPNLKARLNTFREEFRAVWRNYSEL 894
           TPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 185 TPNLKARLNTFREEFRAVWRNYSEL 209



 Score = 28.5 bits (62), Expect(2) = 2e-92
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +2

Query: 200 MDWGNVTAEDL 232
           MDWGNVTAEDL
Sbjct: 1   MDWGNVTAEDL 11


>ref|XP_003568326.1| PREDICTED: PRA1 family protein A3-like [Brachypodium distachyon]
          Length = 209

 Score =  343 bits (881), Expect(2) = 3e-92
 Identities = 164/204 (80%), Positives = 181/204 (88%)
 Frame = +1

Query: 283 VTAEDLMDALREVDWSSPPRPLPEFFSRFTIPRSYSKWNSRLKCNLYYYRTNYXXXXXXX 462
           VTAEDL+DALREVDWS+PPRP+PEFFSRFT+PRSYSKW SRLKCNLYYYRTNY       
Sbjct: 6   VTAEDLVDALREVDWSTPPRPVPEFFSRFTVPRSYSKWTSRLKCNLYYYRTNYFILIMFI 65

Query: 463 XXXXXXRRPLAIVAAILTGLSIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKMRPPITPVI 642
                  +P+AI+AA +TG+SIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKMRPPITPV+
Sbjct: 66  LGMGFLWKPVAILAAFMTGISIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKMRPPITPVL 125

Query: 643 RGRPSSKRAIHICGRPRWMFVMVLSAGSCILWFTSCSLLTVLLAFVVGLLATVLHASFRT 822
           RGRPSSKR+IHICGRPRW+FV++ SA SCILW TSCSLLTV  A ++ LLAT+LHASFRT
Sbjct: 126 RGRPSSKRSIHICGRPRWLFVLLFSAVSCILWLTSCSLLTVSWALLIALLATLLHASFRT 185

Query: 823 PNLKARLNTFREEFRAVWRNYSEL 894
           PNLKARLNTFREEFRAVWRNYSEL
Sbjct: 186 PNLKARLNTFREEFRAVWRNYSEL 209



 Score = 23.1 bits (48), Expect(2) = 3e-92
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 200 MDWGNVTAEDL 232
           MDW  VTAEDL
Sbjct: 1   MDWSAVTAEDL 11


Top