BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004988
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana...   144   1e-32
ref|XP_002324363.1| glutamate-gated kainate-type ion channel rec...   143   1e-32
ref|XP_002324375.1| glutamate-gated kainate-type ion channel rec...   142   2e-32
ref|XP_002324361.1| glutamate-gated kainate-type ion channel rec...   142   4e-32
ref|XP_002324368.1| glutamate-gated kainate-type ion channel rec...   140   1e-31

>gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum]
          Length = 952

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/129 (54%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
 Frame = -3

Query: 385 TMQTRVFLVHMRSCLGSRLFAIAKEVSMMNEGYAWIMXXXXXXXXXTMNASIVDS-MQGV 209
           TMQTRVF+VH+   L SR F  AKE  MM +GYAWI+         +++ S+++S MQGV
Sbjct: 225 TMQTRVFVVHLLPSLASRFFLKAKEAGMMRKGYAWIITDVLTSVLDSVDPSVIESSMQGV 284

Query: 208 LGIKPYVPPSEKLSNFRGRWRRKFLQENPEIDEAELSVIGLWAYDSVWALANAVEKINTA 29
           LG+KPYVP S +L+NF  RWR++F QE P+++  EL+V GLWAYDS+ ALA AVEK+ T 
Sbjct: 285 LGVKPYVPRSNELNNFTKRWRKRFRQEYPDMETVELNVFGLWAYDSITALAKAVEKVGTT 344

Query: 28  ASPRFNKLN 2
           A P+F K N
Sbjct: 345 AIPKFKKPN 353


>ref|XP_002324363.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865797|gb|EEF02928.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 867

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/121 (58%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
 Frame = -3

Query: 388 MTMQTRVFLVHMRSCLGSRLFAIAKEVSMMNEGYAWIMXXXXXXXXXTM-NASIVDSMQG 212
           MTMQTRVF+VHM   LG+R+FA AKE+ M++EGY WIM         +  NAS+ ++MQG
Sbjct: 188 MTMQTRVFIVHMFPSLGARVFAKAKEIGMVSEGYVWIMTDGLTAEFFSSPNASVTNTMQG 247

Query: 211 VLGIKPYVPPSEKLSNFRGRWRRKFLQENPEIDEAELSVIGLWAYDSVWALANAVEKINT 32
            LG+KPYVP +E L  FR RW+RKFLQ+NP+I +AEL++ GLWAYD+  ALA AVEK  T
Sbjct: 248 ALGVKPYVPRTEDLETFRIRWKRKFLQDNPDIVDAELNIFGLWAYDAATALALAVEKAGT 307

Query: 31  A 29
           A
Sbjct: 308 A 308


>ref|XP_002324375.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865809|gb|EEF02940.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 843

 Score =  142 bits (359), Expect = 2e-32
 Identities = 75/130 (57%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
 Frame = -3

Query: 388 MTMQTRVFLVHMRSCLGSRLFAIAKEVSMMNEGYAWIMXXXXXXXXXTM-NASIVDSMQG 212
           MTMQTRVF+VHM   LG+RLFA AKE+ MM+EGY WIM         +  + S+ D++QG
Sbjct: 214 MTMQTRVFIVHMYGYLGTRLFAKAKEIGMMSEGYVWIMTDGLTTDFLSSPSPSVTDTIQG 273

Query: 211 VLGIKPYVPPSEKLSNFRGRWRRKFLQENPEIDEAELSVIGLWAYDSVWALANAVEKINT 32
           VLGIKPYVP +++L NFR RW+RKFLQ+NP   +AELS+ GLWAYD+  ALA AVEK   
Sbjct: 274 VLGIKPYVPRTKELENFRVRWKRKFLQDNPNNIDAELSIYGLWAYDATKALARAVEKAG- 332

Query: 31  AASPRFNKLN 2
           A +  F K N
Sbjct: 333 ATNFGFQKAN 342


>ref|XP_002324361.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865795|gb|EEF02926.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 856

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
 Frame = -3

Query: 388 MTMQTRVFLVHMRSCLGSRLFAIAKEVSMMNEGYAWIMXXXXXXXXXTM-NASIVDSMQG 212
           MTMQTRVF+VHM   LG+RLFA AKE+ MM+EGY WIM         +  N S+ D+MQG
Sbjct: 221 MTMQTRVFIVHMYQSLGTRLFAKAKEIGMMSEGYVWIMTDGLTADLLSTPNYSVTDTMQG 280

Query: 211 VLGIKPYVPPSEKLSNFRGRWRRKFLQENPEIDEAELSVIGLWAYDSVWALANAVEKINT 32
           VLGIKP+VP +++L +FR RW+RKF Q+NP+I +AEL++ GLWAYD+  ALA AVEK+  
Sbjct: 281 VLGIKPHVPRTKELKDFRVRWKRKFQQDNPDIIDAELNIYGLWAYDAATALAFAVEKMEN 340

Query: 31  AASPRFN 11
               + N
Sbjct: 341 FGFQKVN 347


>ref|XP_002324368.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865802|gb|EEF02933.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 885

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/121 (56%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
 Frame = -3

Query: 388 MTMQTRVFLVHMRSCLGSRLFAIAKEVSMMNEGYAWIMXXXXXXXXXTM-NASIVDSMQG 212
           MTMQTRVF+VHM   LG+R+F+IAKE+ M++EGY WIM         +  NAS+ ++MQG
Sbjct: 190 MTMQTRVFIVHMFPSLGARVFSIAKEIGMVSEGYVWIMTDGLEAEFFSSPNASVTNTMQG 249

Query: 211 VLGIKPYVPPSEKLSNFRGRWRRKFLQENPEIDEAELSVIGLWAYDSVWALANAVEKINT 32
            LG+KPYVP ++ L  FR RW+RKF Q+NP+I +A+L++ GLWAYD+  ALA AVEK  T
Sbjct: 250 ALGVKPYVPRTKDLETFRIRWKRKFQQDNPDIVDADLNIFGLWAYDAATALALAVEKAGT 309

Query: 31  A 29
           A
Sbjct: 310 A 310