BLASTX nr result
ID: Cimicifuga21_contig00004986
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00004986
(631 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003548428.1| PREDICTED: uncharacterized protein LOC100803... 101 7e-27
ref|XP_003529901.1| PREDICTED: uncharacterized protein LOC100800... 104 9e-27
ref|XP_002277932.1| PREDICTED: uncharacterized protein LOC100267... 90 1e-22
ref|XP_002521170.1| conserved hypothetical protein [Ricinus comm... 89 4e-21
gb|AAG50563.1|AC073506_5 hypothetical protein [Arabidopsis thali... 86 3e-17
>ref|XP_003548428.1| PREDICTED: uncharacterized protein LOC100803198 [Glycine max]
Length = 934
Score = 101 bits (251), Expect(2) = 7e-27
Identities = 61/138 (44%), Positives = 74/138 (53%)
Frame = +3
Query: 66 DGSSSQALLPFMTVTQQENICSELPILHLYSLELLSAIIKGTHSKPKYTILQGSLCLCMT 245
+GS Q LPFMT QQENICSELP+LHL SLELL+AIIK S
Sbjct: 405 NGSLPQMSLPFMTAKQQENICSELPVLHLSSLELLTAIIKAMGS---------------- 448
Query: 246 RGRAFLFQLLATCSCCQL*D*PISKICQLLPYAAEVARILTEYFGRCMLPALRIKVYSIA 425
QLLP+AA + RI+T+YF C LP LRIKVYS+
Sbjct: 449 ---------------------------QLLPHAAFIVRIITKYFKTCKLPELRIKVYSVT 481
Query: 426 KVLLISMGVGMAFYLLRK 479
+ L I+MGVG+A YL ++
Sbjct: 482 RNLFITMGVGLALYLAQE 499
Score = 45.1 bits (105), Expect(2) = 7e-27
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 470 APEVINNAFVDLDSFSH---GCTNAS-SKPITYALQQPSNKKRKHATLTESTSDHQNG 631
A EVINNAF DL S H G N S S L PS++KRKH++ T S +H G
Sbjct: 497 AQEVINNAFADLSSIEHKNGGILNGSYSNASAGTLLPPSHRKRKHSSTTGSLQEHGEG 554
>ref|XP_003529901.1| PREDICTED: uncharacterized protein LOC100800871 [Glycine max]
Length = 883
Score = 104 bits (259), Expect(2) = 9e-27
Identities = 63/138 (45%), Positives = 75/138 (54%)
Frame = +3
Query: 66 DGSSSQALLPFMTVTQQENICSELPILHLYSLELLSAIIKGTHSKPKYTILQGSLCLCMT 245
+GS Q LPFMT QQENICSELP+LHL SLELL+AIIK S
Sbjct: 356 NGSLPQMSLPFMTAKQQENICSELPVLHLSSLELLTAIIKAMGS---------------- 399
Query: 246 RGRAFLFQLLATCSCCQL*D*PISKICQLLPYAAEVARILTEYFGRCMLPALRIKVYSIA 425
QLLP+AA + RI+T+YF C LP LRIKVYS+
Sbjct: 400 ---------------------------QLLPHAAYIVRIITKYFKTCKLPELRIKVYSVT 432
Query: 426 KVLLISMGVGMAFYLLRK 479
+ LLI+MGVGMA YL ++
Sbjct: 433 RNLLITMGVGMALYLAQE 450
Score = 41.6 bits (96), Expect(2) = 9e-27
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +2
Query: 470 APEVINNAFVDLDSFSH---GCTNAS-SKPITYALQQPSNKKRKHATLTESTSDHQNG 631
A EVINNAF DL H G N S S AL P ++KRKH++ T S +H G
Sbjct: 448 AQEVINNAFADLSIIEHKNSGILNGSNSNASAGALLLPIHRKRKHSSTTGSLQEHGEG 505
>ref|XP_002277932.1| PREDICTED: uncharacterized protein LOC100267953 [Vitis vinifera]
Length = 819
Score = 90.1 bits (222), Expect(2) = 1e-22
Identities = 52/135 (38%), Positives = 69/135 (51%)
Frame = +3
Query: 66 DGSSSQALLPFMTVTQQENICSELPILHLYSLELLSAIIKGTHSKPKYTILQGSLCLCMT 245
DGS SQ+ LP QQE ICSELP LHL SL+LL AII+G S
Sbjct: 339 DGSLSQSPLPSTAAMQQEFICSELPALHLASLDLLEAIIRGVRS---------------- 382
Query: 246 RGRAFLFQLLATCSCCQL*D*PISKICQLLPYAAEVARILTEYFGRCMLPALRIKVYSIA 425
QLLP+AAE+ +L EYF RC+LP LR+K+Y I
Sbjct: 383 ---------------------------QLLPHAAEIIGLLKEYFKRCVLPGLRVKIYMIV 415
Query: 426 KVLLISMGVGMAFYL 470
++ L++ G+G+A ++
Sbjct: 416 RIFLLTQGIGVALHI 430
Score = 42.0 bits (97), Expect(2) = 1e-22
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 476 EVINNAFVDLDSFSHG----CTNASSKPITYALQQPSNKKRKHATLTESTSDHQNG 631
EVI+NAF+DLD G ++A SK T AL Q S KKRK +T + +H G
Sbjct: 433 EVISNAFIDLDVIGCGSGVESSSAHSKITTEALPQLSCKKRKRVDVTRNLEEHPEG 488
>ref|XP_002521170.1| conserved hypothetical protein [Ricinus communis]
gi|223539617|gb|EEF41201.1| conserved hypothetical
protein [Ricinus communis]
Length = 863
Score = 88.6 bits (218), Expect(2) = 4e-21
Identities = 55/138 (39%), Positives = 70/138 (50%)
Frame = +3
Query: 66 DGSSSQALLPFMTVTQQENICSELPILHLYSLELLSAIIKGTHSKPKYTILQGSLCLCMT 245
DGS +A F+ T+QE ICSELP+LH L+LL+++IKG S
Sbjct: 357 DGSVPRASSNFVIATEQEFICSELPVLHSSILDLLTSVIKGMRS---------------- 400
Query: 246 RGRAFLFQLLATCSCCQL*D*PISKICQLLPYAAEVARILTEYFGRCMLPALRIKVYSIA 425
QLLP+AA + R++ EYF RC L LRIK YSI
Sbjct: 401 ---------------------------QLLPHAAYIVRLVKEYFRRCQLSELRIKTYSIT 433
Query: 426 KVLLISMGVGMAFYLLRK 479
KVLL SMGVG+A YL ++
Sbjct: 434 KVLLTSMGVGIAIYLAQE 451
Score = 38.5 bits (88), Expect(2) = 4e-21
Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +2
Query: 470 APEVINNAFVDLDSFSHGC--TNASSKPITYALQQPSNKKRKH 592
A EV+NN+ +DLD S GC ++A SK AL QP N+KRKH
Sbjct: 449 AQEVVNNSLLDLDP-SVGCIFSSAYSKASFGALLQPCNRKRKH 490
>gb|AAG50563.1|AC073506_5 hypothetical protein [Arabidopsis thaliana]
Length = 873
Score = 85.5 bits (210), Expect(2) = 3e-17
Identities = 53/138 (38%), Positives = 68/138 (49%)
Frame = +3
Query: 66 DGSSSQALLPFMTVTQQENICSELPILHLYSLELLSAIIKGTHSKPKYTILQGSLCLCMT 245
+GS +A+ PFMT QQE +C+ELP LH +LELL A +K S
Sbjct: 399 NGSLPRAMSPFMTGIQQELVCAELPALHSSALELLCATLKSIRS---------------- 442
Query: 246 RGRAFLFQLLATCSCCQL*D*PISKICQLLPYAAEVARILTEYFGRCMLPALRIKVYSIA 425
QLLPYAA V R+++ YF +C LP LRIK+YSI
Sbjct: 443 ---------------------------QLLPYAASVVRLVSSYFRKCSLPELRIKLYSIT 475
Query: 426 KVLLISMGVGMAFYLLRK 479
LL SMG+GMA L ++
Sbjct: 476 TTLLKSMGIGMAMQLAQE 493
Score = 28.5 bits (62), Expect(2) = 3e-17
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 470 APEVINNAFVDLDSFS-HGCTNASSKPITY---ALQQPSNKKRKHATLTESTS 616
A EV+ NA VDLD S ASSK + AL Q +KKRKH+ + S
Sbjct: 491 AQEVVINASVDLDQTSLEAFDVASSKNPSLTNGALLQACSKKRKHSGVEAENS 543