BLASTX nr result

ID: Cimicifuga21_contig00004972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004972
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329052.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
gb|ABK95862.1| unknown [Populus trichocarpa]                           91   1e-16
gb|AAX92894.1| Similar to At1g55140 [Oryza sativa Japonica Group...    87   1e-15
gb|ACN35664.1| unknown [Zea mays] gi|414875846|tpg|DAA52977.1| T...    87   1e-15
gb|EEE51893.1| hypothetical protein OsJ_33476 [Oryza sativa Japo...    87   1e-15

>ref|XP_002329052.1| predicted protein [Populus trichocarpa] gi|222839723|gb|EEE78046.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/65 (69%), Positives = 54/65 (83%)
 Frame = -1

Query: 427 KNIDSGKTRTTKRAGVAVYNRASSLETLIGFLYLTNPPRLEDLMLKLGFTTSSSNKLIME 248
           KN+ S KTRT +R GVAVYNRASSLETL+GFLYLTN  RLE++MLKLGF+T SS ++I E
Sbjct: 179 KNVGSTKTRTKRRVGVAVYNRASSLETLVGFLYLTNVSRLEEVMLKLGFSTDSSTQMIPE 238

Query: 247 ELRNK 233
           E  +K
Sbjct: 239 EENSK 243


>gb|ABK95862.1| unknown [Populus trichocarpa]
          Length = 246

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/65 (69%), Positives = 54/65 (83%)
 Frame = -1

Query: 427 KNIDSGKTRTTKRAGVAVYNRASSLETLIGFLYLTNPPRLEDLMLKLGFTTSSSNKLIME 248
           KN+ S KTRT +R GVAVYNRASSLETL+GFLYLTN  RLE++MLKLGF+T SS ++I E
Sbjct: 179 KNVGSTKTRTKRRVGVAVYNRASSLETLVGFLYLTNVSRLEEVMLKLGFSTDSSTQMIPE 238

Query: 247 ELRNK 233
           E  +K
Sbjct: 239 EENSK 243


>gb|AAX92894.1| Similar to At1g55140 [Oryza sativa Japonica Group]
           gi|77549501|gb|ABA92298.1| RNase3 domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|215769356|dbj|BAH01585.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 172

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/64 (68%), Positives = 54/64 (84%)
 Frame = -1

Query: 427 KNIDSGKTRTTKRAGVAVYNRASSLETLIGFLYLTNPPRLEDLMLKLGFTTSSSNKLIME 248
           +NI S KTRT KRAG+AVYNRASSLETLIG+LYLTN  RLE LM +LGFT+ +S++ I +
Sbjct: 90  RNIVSSKTRTRKRAGIAVYNRASSLETLIGYLYLTNFKRLEQLMFQLGFTSGASSQHIAD 149

Query: 247 ELRN 236
           ELR+
Sbjct: 150 ELRS 153


>gb|ACN35664.1| unknown [Zea mays] gi|414875846|tpg|DAA52977.1| TPA: hypothetical
           protein ZEAMMB73_241035 [Zea mays]
          Length = 255

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/64 (68%), Positives = 54/64 (84%)
 Frame = -1

Query: 427 KNIDSGKTRTTKRAGVAVYNRASSLETLIGFLYLTNPPRLEDLMLKLGFTTSSSNKLIME 248
           +NI S KTRT KRAG+AVYNRASSLETLIG+LYLTN  RLE LM +LGFT+ +S++ I +
Sbjct: 174 RNIVSSKTRTRKRAGIAVYNRASSLETLIGYLYLTNFKRLEQLMFQLGFTSGASSQHIAD 233

Query: 247 ELRN 236
           ELR+
Sbjct: 234 ELRS 237


>gb|EEE51893.1| hypothetical protein OsJ_33476 [Oryza sativa Japonica Group]
          Length = 254

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/64 (68%), Positives = 54/64 (84%)
 Frame = -1

Query: 427 KNIDSGKTRTTKRAGVAVYNRASSLETLIGFLYLTNPPRLEDLMLKLGFTTSSSNKLIME 248
           +NI S KTRT KRAG+AVYNRASSLETLIG+LYLTN  RLE LM +LGFT+ +S++ I +
Sbjct: 172 RNIVSSKTRTRKRAGIAVYNRASSLETLIGYLYLTNFKRLEQLMFQLGFTSGASSQHIAD 231

Query: 247 ELRN 236
           ELR+
Sbjct: 232 ELRS 235


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