BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004971
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636379.1| hypothetical protein MTR_040s0004 [Medicago ...   155   3e-36
ref|XP_003597618.1| hypothetical protein MTR_2g100220 [Medicago ...   155   3e-36
gb|ABN08414.1| Ribonuclease III [Medicago truncatula]                 155   3e-36
ref|XP_002527410.1| RNA binding protein, putative [Ricinus commu...   152   3e-35
ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycin...   151   8e-35

>ref|XP_003636379.1| hypothetical protein MTR_040s0004 [Medicago truncatula]
           gi|355502314|gb|AES83517.1| hypothetical protein
           MTR_040s0004 [Medicago truncatula]
          Length = 279

 Score =  155 bits (393), Expect = 3e-36
 Identities = 88/155 (56%), Positives = 107/155 (69%), Gaps = 5/155 (3%)
 Frame = +1

Query: 100 SWDTQPGRTTIPAPNLNSSPSFNTNTFKKRLNSLTKSPQTKQTSAHSPPPTKKDSINVSN 279
           SWDTQ     +P         +N N  +K L +    PQ+   ++ SP P+ ++   +S+
Sbjct: 26  SWDTQQ---RLP---------YNRNAPRK-LTTQPPKPQSPSPTSSSPAPSTRNENYISD 72

Query: 280 LLKLNNP--TIPKQEEV---DELYLGCERWLPIAPKVNNPRSIYNAASLAYIGDCIFELY 444
           LLK   P  TI K EEV   DE YLG +RWLP  PKV  PRS++NAA+LAYIGDCI+ELY
Sbjct: 73  LLKRATPLPTIGKIEEVQEHDETYLGYDRWLPTPPKVVKPRSVFNAATLAYIGDCIYELY 132

Query: 445 ARRHFLYPPLSIEEFNDRVMAVVRCEAQDALLKKL 549
           ARRHFL+PPLSIEEFNDRVMAVVRCEAQDALL+KL
Sbjct: 133 ARRHFLFPPLSIEEFNDRVMAVVRCEAQDALLQKL 167


>ref|XP_003597618.1| hypothetical protein MTR_2g100220 [Medicago truncatula]
           gi|355486666|gb|AES67869.1| hypothetical protein
           MTR_2g100220 [Medicago truncatula]
          Length = 258

 Score =  155 bits (393), Expect = 3e-36
 Identities = 88/155 (56%), Positives = 107/155 (69%), Gaps = 5/155 (3%)
 Frame = +1

Query: 100 SWDTQPGRTTIPAPNLNSSPSFNTNTFKKRLNSLTKSPQTKQTSAHSPPPTKKDSINVSN 279
           SWDTQ     +P         +N N  +K L +    PQ+   ++ SP P+ ++   +S+
Sbjct: 26  SWDTQQ---RLP---------YNRNAPRK-LTTQPPKPQSPSPTSSSPAPSTRNENYISD 72

Query: 280 LLKLNNP--TIPKQEEV---DELYLGCERWLPIAPKVNNPRSIYNAASLAYIGDCIFELY 444
           LLK   P  TI K EEV   DE YLG +RWLP  PKV  PRS++NAA+LAYIGDCI+ELY
Sbjct: 73  LLKRATPLPTIGKIEEVQEHDETYLGYDRWLPTPPKVVKPRSVFNAATLAYIGDCIYELY 132

Query: 445 ARRHFLYPPLSIEEFNDRVMAVVRCEAQDALLKKL 549
           ARRHFL+PPLSIEEFNDRVMAVVRCEAQDALL+KL
Sbjct: 133 ARRHFLFPPLSIEEFNDRVMAVVRCEAQDALLQKL 167


>gb|ABN08414.1| Ribonuclease III [Medicago truncatula]
          Length = 223

 Score =  155 bits (393), Expect = 3e-36
 Identities = 88/155 (56%), Positives = 107/155 (69%), Gaps = 5/155 (3%)
 Frame = +1

Query: 100 SWDTQPGRTTIPAPNLNSSPSFNTNTFKKRLNSLTKSPQTKQTSAHSPPPTKKDSINVSN 279
           SWDTQ     +P         +N N  +K L +    PQ+   ++ SP P+ ++   +S+
Sbjct: 26  SWDTQQ---RLP---------YNRNAPRK-LTTQPPKPQSPSPTSSSPAPSTRNENYISD 72

Query: 280 LLKLNNP--TIPKQEEV---DELYLGCERWLPIAPKVNNPRSIYNAASLAYIGDCIFELY 444
           LLK   P  TI K EEV   DE YLG +RWLP  PKV  PRS++NAA+LAYIGDCI+ELY
Sbjct: 73  LLKRATPLPTIGKIEEVQEHDETYLGYDRWLPTPPKVVKPRSVFNAATLAYIGDCIYELY 132

Query: 445 ARRHFLYPPLSIEEFNDRVMAVVRCEAQDALLKKL 549
           ARRHFL+PPLSIEEFNDRVMAVVRCEAQDALL+KL
Sbjct: 133 ARRHFLFPPLSIEEFNDRVMAVVRCEAQDALLQKL 167


>ref|XP_002527410.1| RNA binding protein, putative [Ricinus communis]
           gi|223533220|gb|EEF34976.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 248

 Score =  152 bits (384), Expect = 3e-35
 Identities = 85/163 (52%), Positives = 106/163 (65%), Gaps = 7/163 (4%)
 Frame = +1

Query: 82  MNVRAYSWDTQPGRTTIPAPNLNSSPSFNTNTFKKRLNSLTKSPQTKQTSAHSPPPTKKD 261
           ++VRA SWDTQ   T            +N N  +K     TK+P ++  +   PPPT   
Sbjct: 14  VSVRA-SWDTQQRLT------------YNPNAPRKH----TKNPTSQPNTLSLPPPTTTS 56

Query: 262 SINV-------SNLLKLNNPTIPKQEEVDELYLGCERWLPIAPKVNNPRSIYNAASLAYI 420
            ++V       SNLLK N       +++D+ YLG ERW+P  PKV  PRS+YNAA+LAYI
Sbjct: 57  PLSVTVTTQSVSNLLKRNTTPQGVMKKLDDTYLGYERWMPTPPKVEKPRSVYNAATLAYI 116

Query: 421 GDCIFELYARRHFLYPPLSIEEFNDRVMAVVRCEAQDALLKKL 549
           GD I+ELYARRHFL+PPLSIEE+NDRVM+VVRCEAQDALL KL
Sbjct: 117 GDSIYELYARRHFLFPPLSIEEYNDRVMSVVRCEAQDALLHKL 159


>ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycine max]
           gi|255631798|gb|ACU16266.1| unknown [Glycine max]
          Length = 240

 Score =  151 bits (381), Expect = 8e-35
 Identities = 89/157 (56%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
 Frame = +1

Query: 88  VRAYSWDTQPGRTTIPAPNLNSSPSFNTNTFKKRLNSLTKSPQTKQTSAHSPPPTKKDSI 267
           VRA SWDTQ     +P         +N N  +K  N++  +P        +PP T+K   
Sbjct: 16  VRA-SWDTQQ---RLP---------YNPNAPRKLKNNIVATPTP------TPPITRKREQ 56

Query: 268 NVSNLLKLNNP--TIPKQEEV-DELYLGCERWLPIAPKVNNPRSIYNAASLAYIGDCIFE 438
            +S+LLK   P  TI   EEV DE YLG E+WLP  PKV  PRS++NAA+LAYIGDCI+E
Sbjct: 57  YISDLLKRATPLPTIGHIEEVQDETYLGYEKWLPTPPKVVKPRSVFNAATLAYIGDCIYE 116

Query: 439 LYARRHFLYPPLSIEEFNDRVMAVVRCEAQDALLKKL 549
           LYARRHFL+PPLSIEE+NDRVMAVVRCEAQDALL+KL
Sbjct: 117 LYARRHFLFPPLSIEEYNDRVMAVVRCEAQDALLQKL 153