BLASTX nr result

ID: Cimicifuga21_contig00004929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004929
         (2286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7...   893   0.0  
ref|XP_002311694.1| predicted protein [Populus trichocarpa] gi|2...   868   0.0  
ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 7...   863   0.0  
ref|XP_003555746.1| PREDICTED: U-box domain-containing protein 7...   859   0.0  
ref|XP_002528359.1| Pre-mRNA-splicing factor, putative [Ricinus ...   857   0.0  

>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
            gi|296083725|emb|CBI23714.3| unnamed protein product
            [Vitis vinifera]
          Length = 524

 Score =  893 bits (2307), Expect = 0.0
 Identities = 436/520 (83%), Positives = 479/520 (92%)
 Frame = +2

Query: 224  MICAISGEVPEEPVVSKKSGLLFEKRLIESHVKDNEKCPVTGEPLTMDDIVSVKTNKVVK 403
            M C++SGEVPEEPVVSKKSGLLFEKRLIE H+ D  KCP+TGEPLTMDDIV ++T K+VK
Sbjct: 1    MNCSMSGEVPEEPVVSKKSGLLFEKRLIERHISDYGKCPITGEPLTMDDIVPIQTGKIVK 60

Query: 404  PRPLQAASIPGLLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 583
            PRP+QAASIPG+LGMFQ EWD LMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61   PRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 584  ERDDARTLLAQAERQIPMXXXXXXXXXXXMLSNGKRAPEDEDLGPAGKKVRLGISAEIIA 763
            ERD+AR+LLAQ+ERQIPM            LSNGKRA EDE+LGP GKK+R GISA II 
Sbjct: 121  ERDEARSLLAQSERQIPMSMSTATAVNASALSNGKRAAEDEELGPNGKKLRPGISASIIT 180

Query: 764  ELTDCNALLSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKTSKPGILAADIHPTKDIIA 943
            ELTDCNA LSQQRK+RQIP++LAPID++ERYTQLSS+PLHKT+KPGIL+ADI+ +KDIIA
Sbjct: 181  ELTDCNAALSQQRKKRQIPTSLAPIDAVERYTQLSSYPLHKTNKPGILSADIYYSKDIIA 240

Query: 944  TGGVDTNAVLFDRTSGQILSTLSGHSKKVNSVKFVSRDELFVTGSADKTVRIWQGSEEGN 1123
            TGGVD NAVLFDR SGQILSTLSGHSKKV SVKFV++D+LF+T SADKTVR+WQGS+  N
Sbjct: 241  TGGVDANAVLFDRQSGQILSTLSGHSKKVTSVKFVTQDDLFLTASADKTVRVWQGSDNEN 300

Query: 1124 YNCRHILKDHTAEVQAVTIHATNNYFVTASLDNTWCFYDLSSGLCLTQVEVGDASGTEGY 1303
            YNCRHILKDHTAEVQAVT+HATNNYFVTASLDNTWCFYDLSSGLCLTQ  V DASG+EGY
Sbjct: 301  YNCRHILKDHTAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQ--VADASGSEGY 358

Query: 1304 TSAAFHPDGLILGTGTSEALVRIWDVKSQVNVAKFDGHIGPVTAMSFSENGYFLATAAHD 1483
            TSAAFHPDGLILGTGTSEALV+IWDVKSQ NVA+FDGH+G VTA+SFSENGYFLATAAHD
Sbjct: 359  TSAAFHPDGLILGTGTSEALVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLATAAHD 418

Query: 1484 GVKLWDLRKLRNFRTFAPYDSDTPTNSVEFDHSGSYLAMAGSDVRVYQVASVKSEWNCVK 1663
            GVKLWDLRKLRNFRTF PYDS+T TNSVEFDHSG+YLA+AGSD+RVYQVA+VKSEWNC+K
Sbjct: 419  GVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHSGNYLAIAGSDIRVYQVANVKSEWNCIK 478

Query: 1664 TFPDLSGTGKATCVKFGPDAKYMAVGSMDRNLRIFGLPGD 1783
            TFPDLSGTGKATCVKFGPDAKY+AVGSMDRNLRIFGLPGD
Sbjct: 479  TFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLRIFGLPGD 518


>ref|XP_002311694.1| predicted protein [Populus trichocarpa] gi|222851514|gb|EEE89061.1|
            predicted protein [Populus trichocarpa]
          Length = 524

 Score =  868 bits (2243), Expect = 0.0
 Identities = 422/520 (81%), Positives = 466/520 (89%)
 Frame = +2

Query: 224  MICAISGEVPEEPVVSKKSGLLFEKRLIESHVKDNEKCPVTGEPLTMDDIVSVKTNKVVK 403
            M C+ISGEVPE+PVVSKKSGLL+EKRLIE H+ +  KCP+TGEPLTMDDIV VKT K+VK
Sbjct: 1    MHCSISGEVPEQPVVSKKSGLLYEKRLIERHISEYGKCPITGEPLTMDDIVPVKTGKIVK 60

Query: 404  PRPLQAASIPGLLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 583
            PR +Q ASIPG+LGMFQNEWD LMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61   PRTVQTASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 584  ERDDARTLLAQAERQIPMXXXXXXXXXXXMLSNGKRAPEDEDLGPAGKKVRLGISAEIIA 763
            ERD+AR+LLAQAERQIPM           +LSNGKRA ED+DLG  GK+VR GISA II 
Sbjct: 121  ERDEARSLLAQAERQIPMSASEAVTENASVLSNGKRAAEDDDLGQPGKRVRPGISASIIT 180

Query: 764  ELTDCNALLSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKTSKPGILAADIHPTKDIIA 943
            ELTDCNA LSQQRK+RQIP TLAPI +LERYTQLSSHPLHKTSKPGIL+ DI  +KDIIA
Sbjct: 181  ELTDCNATLSQQRKKRQIPPTLAPIGALERYTQLSSHPLHKTSKPGILSIDIQYSKDIIA 240

Query: 944  TGGVDTNAVLFDRTSGQILSTLSGHSKKVNSVKFVSRDELFVTGSADKTVRIWQGSEEGN 1123
            TGGVD  AV+FDR SGQI+STLSGHSKKV SVKFV+  E F+TGSADKT+R+WQGSE+GN
Sbjct: 241  TGGVDATAVVFDRLSGQIVSTLSGHSKKVTSVKFVAEGEFFLTGSADKTIRVWQGSEDGN 300

Query: 1124 YNCRHILKDHTAEVQAVTIHATNNYFVTASLDNTWCFYDLSSGLCLTQVEVGDASGTEGY 1303
            Y+CRHILKDHTAEVQAVT+HATNNYFVTASLDNTWCFYDLSSGLC+TQ  V D S T+GY
Sbjct: 301  YDCRHILKDHTAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCMTQ--VADTSKTDGY 358

Query: 1304 TSAAFHPDGLILGTGTSEALVRIWDVKSQVNVAKFDGHIGPVTAMSFSENGYFLATAAHD 1483
            TSAAFHPDGLILGTGTSEA+V+IWDVKSQ NVAKF+GH+GPVTA+SFSENGYFLATAAHD
Sbjct: 359  TSAAFHPDGLILGTGTSEAVVKIWDVKSQANVAKFEGHVGPVTAISFSENGYFLATAAHD 418

Query: 1484 GVKLWDLRKLRNFRTFAPYDSDTPTNSVEFDHSGSYLAMAGSDVRVYQVASVKSEWNCVK 1663
             VKLWDLRKL+NFRT   YDSDTPTNSVEFDHSGSYL +AGSD+RVYQV SVK++WNC+K
Sbjct: 419  SVKLWDLRKLKNFRTLNLYDSDTPTNSVEFDHSGSYLGIAGSDIRVYQVGSVKADWNCIK 478

Query: 1664 TFPDLSGTGKATCVKFGPDAKYMAVGSMDRNLRIFGLPGD 1783
            T PDLSGTG+ATC+KFGPDA Y+AVGSMDRNLR+FGLPGD
Sbjct: 479  TLPDLSGTGRATCLKFGPDANYIAVGSMDRNLRVFGLPGD 518


>ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 72-like [Cucumis sativus]
          Length = 522

 Score =  863 bits (2229), Expect = 0.0
 Identities = 421/526 (80%), Positives = 475/526 (90%), Gaps = 1/526 (0%)
 Frame = +2

Query: 224  MICAISGEVPEEPVVSKKSGLLFEKRLIESHVKDNEKCPVTGEPLTMDDIVSVKTNKVVK 403
            M C+ISGE+PEEPVVS+ SGLLFEKRLIE H+ D  KCPVTGEPL++DDIV +KT K+VK
Sbjct: 1    MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 404  PRPLQAASIPGLLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 583
            PR  QAASIPG+LGMFQNEWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61   PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 118

Query: 584  ERDDARTLLAQAERQIPMXXXXXXXXXXXMLSNGKRAPEDEDLGPAGKKVRLGISAEIIA 763
            ERD+AR+LLA AERQ+P+           +  NGKR  EDE+LGP GKK+R GIS  +I+
Sbjct: 119  ERDEARSLLALAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISDAVIS 178

Query: 764  ELTDCNALLSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKTSKPGILAADIHPTKDIIA 943
            ELT+CNA LSQQRKRRQIP+TL P+++LE YTQ+SSHPLHKTSKPGI++ DIH  KD+IA
Sbjct: 179  ELTECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGIMSLDIHHEKDVIA 238

Query: 944  TGGVDTNAVLFDRTSGQILSTLSGHSKKVNSVKFVSRDELFVTGSADKTVRIWQGSEEGN 1123
            TGG+DTNAVLF R+SG+ILSTLSGHSKKV SVKFV RD+LF+TGSADKTVR+WQ S++GN
Sbjct: 239  TGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 298

Query: 1124 YNCRHILKDHTAEVQAVTIHATNNYFVTASLDNTWCFYDLSSGLCLTQVEVGDASGTEGY 1303
            YNCRHILKDHTAEVQAVT+HATN++FVTASLDNTWCFY+L+SGLCLTQ  V + S TEGY
Sbjct: 299  YNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQ--VAEDSETEGY 356

Query: 1304 TSAAFHPDGLILGTGTSEALVRIWDVKSQVNVAKFDGHIGPVTAMSFSENGYFLATAAHD 1483
            TSAAFHPDGLILGTGTSEALV+IWDVKSQ NVAKFDGH+G VTA+SFSENGYFLATAAHD
Sbjct: 357  TSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHD 416

Query: 1484 GVKLWDLRKLRNFRTFAPYDSDTPTNSVEFDHSGSYLAMAGSDVRVYQVASVKSEWNCVK 1663
            GVKLWDLRKL+NFRTFAPYDSDTPTNSV+FDHSGSYLA+AGSD+RVYQVASVKSEWNC+K
Sbjct: 417  GVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIK 476

Query: 1664 TFPDLSGTGKATCVKFGPDAKYMAVGSMDRNLRIFGLPG-DGSEET 1798
            T PDLSGTGKATC+KFGPDAKY+AVGSMDRNLRIFG+PG DG+ ET
Sbjct: 477  TLPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAMET 522


>ref|XP_003555746.1| PREDICTED: U-box domain-containing protein 72 [Glycine max]
          Length = 525

 Score =  859 bits (2219), Expect = 0.0
 Identities = 415/521 (79%), Positives = 469/521 (90%), Gaps = 1/521 (0%)
 Frame = +2

Query: 224  MICAISGEVPEEPVVSKKSGLLFEKRLIESHVKDNEKCPVTGEPLTMDDIVSVKTNKVVK 403
            M C+ISGEVPEEPVVS+ SGLLFEKRLIE H+ D  KCP+TGEPLTMDDIV +KT K+VK
Sbjct: 1    MNCSISGEVPEEPVVSRNSGLLFEKRLIERHISDYGKCPITGEPLTMDDIVPIKTGKIVK 60

Query: 404  PRPLQAASIPGLLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 583
            PRP+QAASIPG+LGMFQNEWD LMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61   PRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 584  ERDDARTLLAQAERQIPMXXXXXXXXXXXMLSNGKRAPEDEDLGPAGKKVRLGISAEIIA 763
            ERD+AR+LLAQAERQ P+           +LSNGKRA EDEDL P  KK+  GIS+ II+
Sbjct: 121  ERDEARSLLAQAERQFPVSAPNAITANAPVLSNGKRAAEDEDLAPGAKKIHPGISSSIIS 180

Query: 764  ELTDCNALLSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKTSKPGILAADIHPTKDIIA 943
            ELTDCNA LSQQRK+RQIP TLAP+++LE YTQ+SSHP HKT+K GI++ DI  +KD+IA
Sbjct: 181  ELTDCNAALSQQRKKRQIPPTLAPVEALEAYTQISSHPFHKTNKQGIISLDILYSKDLIA 240

Query: 944  TGGVDTNAVLFDRTSGQILSTLSGHSKKVNSVKFVSRDELFVTGSADKTVRIWQGSEEGN 1123
            TGG+DTNAV+FDR SGQILSTLSGHSKKV SVKFV++ E F+T SADKTVR+WQGS++GN
Sbjct: 241  TGGIDTNAVIFDRPSGQILSTLSGHSKKVTSVKFVAQGESFLTASADKTVRLWQGSDDGN 300

Query: 1124 YNCRHILKDHTAEVQAVTIHATNNYFVTASLDNTWCFYDLSSGLCLTQVEVGDASG-TEG 1300
            YNCRHILKDH+AEVQAVT+HATNNYFVTASLD +WCFY+LSSG CLTQV   D SG +EG
Sbjct: 301  YNCRHILKDHSAEVQAVTVHATNNYFVTASLDGSWCFYELSSGTCLTQVY--DTSGSSEG 358

Query: 1301 YTSAAFHPDGLILGTGTSEALVRIWDVKSQVNVAKFDGHIGPVTAMSFSENGYFLATAAH 1480
            YTSAAFHPDGLILGTGT+E+LV+IWDVKSQ NVA+FDGH GPVTA+SFSENGYFLATAAH
Sbjct: 359  YTSAAFHPDGLILGTGTTESLVKIWDVKSQANVARFDGHAGPVTAISFSENGYFLATAAH 418

Query: 1481 DGVKLWDLRKLRNFRTFAPYDSDTPTNSVEFDHSGSYLAMAGSDVRVYQVASVKSEWNCV 1660
            DGVKLWDLRKL+NFR FAPYDS+TPT+SVEFDHSGSYLA+AGSD+R+YQVA+VKSEWNC+
Sbjct: 419  DGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHSGSYLAVAGSDIRIYQVANVKSEWNCI 478

Query: 1661 KTFPDLSGTGKATCVKFGPDAKYMAVGSMDRNLRIFGLPGD 1783
            KTFPDLSGTGK TCVKFGPD+KY+AVGSMDRNLRIFGLPG+
Sbjct: 479  KTFPDLSGTGKNTCVKFGPDSKYIAVGSMDRNLRIFGLPGE 519


>ref|XP_002528359.1| Pre-mRNA-splicing factor, putative [Ricinus communis]
            gi|223532227|gb|EEF34031.1| Pre-mRNA-splicing factor,
            putative [Ricinus communis]
          Length = 531

 Score =  857 bits (2213), Expect = 0.0
 Identities = 418/525 (79%), Positives = 466/525 (88%), Gaps = 5/525 (0%)
 Frame = +2

Query: 224  MICAISGEVPEEPVVSKKSGLLFEKRLIESHVKDNEKCPVTGEPLTMDDIVSVKTNKVVK 403
            M C+ISGEVPEEPVVSKKSGLLFEKRLIE H+ D  KCP+T EPLT+DDIV +K  K+VK
Sbjct: 1    MHCSISGEVPEEPVVSKKSGLLFEKRLIERHISDYGKCPITSEPLTLDDIVPMKAGKIVK 60

Query: 404  PRPLQAASIPGLLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 583
            PR +Q+ASIPG+LGMFQNEWD LMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61   PRTIQSASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 584  ERDDARTLLAQAERQIPMXXXXXXXXXXXMLSNGKRAPEDEDLGPAGKKVRLGISAEIIA 763
            ERD+AR+LLAQA+RQIP+             SNGKRA  D+DLGP GKK+R GISA II 
Sbjct: 121  ERDEARSLLAQADRQIPLSVTAAATENAYAASNGKRAAADDDLGPPGKKLRPGISATIIT 180

Query: 764  ELTDCNALLSQQRKRRQIPSTLAPIDSLERYTQLSSHPLHKTSKPGILAADIHPTKDIIA 943
            ELTDCNA LSQQRKRRQIPSTLAP+D++ERYTQLSSHPLHKT+KPGI++ DI  +KDIIA
Sbjct: 181  ELTDCNAALSQQRKRRQIPSTLAPVDAVERYTQLSSHPLHKTNKPGIVSMDIQYSKDIIA 240

Query: 944  TGGVDTNAVLFDRTSGQILSTLSGHSKKVNSVKFVSRDELFVTGSADKTVRIWQGSEEGN 1123
            TGGVD+ AVLFDR SGQILSTLSGHSKKV SV+FV+  +LF+TGSADKTVR+WQGSE+GN
Sbjct: 241  TGGVDSTAVLFDRPSGQILSTLSGHSKKVTSVRFVAEGDLFLTGSADKTVRVWQGSEDGN 300

Query: 1124 YNCRHILKDHTAEVQAVTIHATNNYFVTASLDNTWCFYDLSSGLCLTQVEVG-----DAS 1288
            Y+CRHILKDHTAEVQAVT+HATNNYFVTASLD+TWCFYD+SSGLCL QV        D+S
Sbjct: 301  YDCRHILKDHTAEVQAVTVHATNNYFVTASLDSTWCFYDISSGLCLAQVADSSKSDTDSS 360

Query: 1289 GTEGYTSAAFHPDGLILGTGTSEALVRIWDVKSQVNVAKFDGHIGPVTAMSFSENGYFLA 1468
              EGYTSAAFHPDGLILGTGTS+A+V+IWDVKSQ NVAKF+GH+GPVTA+SFSENGYFLA
Sbjct: 361  SPEGYTSAAFHPDGLILGTGTSDAVVKIWDVKSQANVAKFEGHVGPVTAISFSENGYFLA 420

Query: 1469 TAAHDGVKLWDLRKLRNFRTFAPYDSDTPTNSVEFDHSGSYLAMAGSDVRVYQVASVKSE 1648
            TAA+D VKLWDLRKL+NFRT   YDSDTPTNSVEFDHSG YL +AGSD+RV+QVASVK++
Sbjct: 421  TAAYDSVKLWDLRKLKNFRTLNLYDSDTPTNSVEFDHSGCYLGVAGSDIRVFQVASVKAD 480

Query: 1649 WNCVKTFPDLSGTGKATCVKFGPDAKYMAVGSMDRNLRIFGLPGD 1783
            WNCVKT PDLSGTGKATCVKFGPDAKY+AVGSMDRNLRIFGLP D
Sbjct: 481  WNCVKTLPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRIFGLPAD 525


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