BLASTX nr result

ID: Cimicifuga21_contig00004926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004926
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310549.1| predicted protein [Populus trichocarpa] gi|2...   300   1e-79
ref|XP_002298707.1| predicted protein [Populus trichocarpa] gi|2...   296   1e-78
ref|XP_003545697.1| PREDICTED: riboflavin biosynthesis protein r...   296   2e-78
ref|XP_003575201.1| PREDICTED: riboflavin biosynthesis protein r...   295   3e-78
ref|NP_001159237.1| uncharacterized protein LOC100304324 [Zea ma...   295   3e-78

>ref|XP_002310549.1| predicted protein [Populus trichocarpa] gi|222853452|gb|EEE90999.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  300 bits (767), Expect = 1e-79
 Identities = 143/158 (90%), Positives = 153/158 (96%)
 Frame = -1

Query: 521 GDIGDGKDILVRVHSECLTGDIFGSARCDCGNQLALAMEKIEAAGRGVLVYLRGHEGRGI 342
           G+IGDGKDILVRVHSECLTGDIFGSARCDCG QLALAM++IEAAGRGVLVYLRGHEGRGI
Sbjct: 283 GEIGDGKDILVRVHSECLTGDIFGSARCDCGKQLALAMKQIEAAGRGVLVYLRGHEGRGI 342

Query: 341 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDVGVCTMKLLTNNPAKYI 162
           GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQ+LRD+GV TMKL+TNNPAKY+
Sbjct: 343 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVHTMKLMTNNPAKYV 402

Query: 161 GLKGYGLTIVGRVPLVTPITTENRRYLETKRERMGHVY 48
           GLKGYGL + GRVPL+TPIT ENRRYLETKRE+MGHVY
Sbjct: 403 GLKGYGLAVAGRVPLLTPITMENRRYLETKREKMGHVY 440


>ref|XP_002298707.1| predicted protein [Populus trichocarpa] gi|222845965|gb|EEE83512.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  296 bits (758), Expect = 1e-78
 Identities = 140/158 (88%), Positives = 153/158 (96%)
 Frame = -1

Query: 521 GDIGDGKDILVRVHSECLTGDIFGSARCDCGNQLALAMEKIEAAGRGVLVYLRGHEGRGI 342
           GDIGDG+D+LVRVHSECLTGDIFGSARCDCG+QLALAM++IEAAGRGVLVYLRGHEGRGI
Sbjct: 369 GDIGDGQDVLVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGI 428

Query: 341 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDVGVCTMKLLTNNPAKYI 162
           GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRD+GV TMKL+TNNPAKYI
Sbjct: 429 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPAKYI 488

Query: 161 GLKGYGLTIVGRVPLVTPITTENRRYLETKRERMGHVY 48
           GLKGYGL + GRVPL+TPIT +N+RYLETKR +MGH+Y
Sbjct: 489 GLKGYGLAVSGRVPLLTPITKDNKRYLETKRAKMGHIY 526


>ref|XP_003545697.1| PREDICTED: riboflavin biosynthesis protein ribBA,
           chloroplastic-like [Glycine max]
          Length = 544

 Score =  296 bits (757), Expect = 2e-78
 Identities = 140/158 (88%), Positives = 154/158 (97%)
 Frame = -1

Query: 521 GDIGDGKDILVRVHSECLTGDIFGSARCDCGNQLALAMEKIEAAGRGVLVYLRGHEGRGI 342
           GDIGDG+D+LVRVHSECLTGDIFGSARCDCGNQLALAM++IEAAGRGVLVYLRGHEGRGI
Sbjct: 357 GDIGDGQDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGHEGRGI 416

Query: 341 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDVGVCTMKLLTNNPAKYI 162
           GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRD+GV +MKL+TNNPAKYI
Sbjct: 417 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRSMKLMTNNPAKYI 476

Query: 161 GLKGYGLTIVGRVPLVTPITTENRRYLETKRERMGHVY 48
           GLKGYGLT+ GR+PL+T IT+EN+RYLETKR +MGH+Y
Sbjct: 477 GLKGYGLTVSGRIPLLTLITSENKRYLETKRVKMGHIY 514


>ref|XP_003575201.1| PREDICTED: riboflavin biosynthesis protein ribBA,
           chloroplastic-like [Brachypodium distachyon]
          Length = 554

 Score =  295 bits (754), Expect = 3e-78
 Identities = 140/158 (88%), Positives = 153/158 (96%)
 Frame = -1

Query: 521 GDIGDGKDILVRVHSECLTGDIFGSARCDCGNQLALAMEKIEAAGRGVLVYLRGHEGRGI 342
           G++GDG+DILVRVHSECLTGDIFGSARCDCG+QL+ +ME IE AGRGVLVYLRGHEGRGI
Sbjct: 377 GEVGDGQDILVRVHSECLTGDIFGSARCDCGDQLSKSMEMIEKAGRGVLVYLRGHEGRGI 436

Query: 341 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDVGVCTMKLLTNNPAKYI 162
           GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQ+LRD+GV +MKL+TNNPAKY+
Sbjct: 437 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLITNNPAKYV 496

Query: 161 GLKGYGLTIVGRVPLVTPITTENRRYLETKRERMGHVY 48
           GLKGYGL+IVGRVPLVTPITTENRRYLETKR +MGHVY
Sbjct: 497 GLKGYGLSIVGRVPLVTPITTENRRYLETKRSKMGHVY 534


>ref|NP_001159237.1| uncharacterized protein LOC100304324 [Zea mays]
           gi|223942917|gb|ACN25542.1| unknown [Zea mays]
           gi|413937377|gb|AFW71928.1| hypothetical protein
           ZEAMMB73_632085 [Zea mays]
          Length = 554

 Score =  295 bits (754), Expect = 3e-78
 Identities = 141/158 (89%), Positives = 152/158 (96%)
 Frame = -1

Query: 521 GDIGDGKDILVRVHSECLTGDIFGSARCDCGNQLALAMEKIEAAGRGVLVYLRGHEGRGI 342
           GDIGDG+DILVRVHSECLTGDIFGSARCDCG+QLA+AME IE AGRGVLVYLRGHEGRGI
Sbjct: 377 GDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLAMAMEMIEKAGRGVLVYLRGHEGRGI 436

Query: 341 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDVGVCTMKLLTNNPAKYI 162
           GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQ+LRD+GV +MKL+TNNPAKY 
Sbjct: 437 GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYS 496

Query: 161 GLKGYGLTIVGRVPLVTPITTENRRYLETKRERMGHVY 48
           GLKGYGL+I GRVPL+TPIT+ENRRYLETKR +MGHVY
Sbjct: 497 GLKGYGLSIAGRVPLITPITSENRRYLETKRTKMGHVY 534


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