BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004922
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221...   147   6e-33
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I...   146   1e-32
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid...   145   1e-32
ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group] g...   145   2e-32
ref|XP_003613211.1| DNA-directed RNA polymerases I, II, and III ...   145   2e-32

>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
           [Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
           [Picea sitchensis]
          Length = 71

 Score =  147 bits (370), Expect = 6e-33
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = +3

Query: 135 MIIPVRCFTCGKVIGNKWDTYLDFLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLL 314
           MIIPVRCFTCGKVIGNKWDTYLD LQADYTEGDALDA+GLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 315 NYNTLEKTETN 347
           NYNTLE++ETN
Sbjct: 61  NYNTLERSETN 71


>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5 [Vitis vinifera] gi|297739069|emb|CBI28558.3|
           unnamed protein product [Vitis vinifera]
          Length = 71

 Score =  146 bits (368), Expect = 1e-32
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = +3

Query: 135 MIIPVRCFTCGKVIGNKWDTYLDFLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLL 314
           MIIPVRCFTCGKVIGNKWDTYLD LQADYTEGDALDA+GLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 315 NYNTLEKTETN 347
           NYNTLEK+ET+
Sbjct: 61  NYNTLEKSETS 71


>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
           balbisiana]
          Length = 70

 Score =  145 bits (367), Expect = 1e-32
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 135 MIIPVRCFTCGKVIGNKWDTYLDFLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLL 314
           MIIPVRCFTCGKVIGNKWDTYLD LQADYTEGDALDA+GLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 315 NYNTLEKTET 344
           NYNTLEKTE+
Sbjct: 61  NYNTLEKTES 70


>ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group]
           gi|62733950|gb|AAX96059.1| dna-directed rna polymerase
           ii 8.2 kda polypeptide (ec 2.7.7.6)(rpb10) (rp10)
           (abc10) [Oryza sativa Japonica Group]
           gi|77549069|gb|ABA91866.1| DNA-directed RNA polymerase
           II 8.2 kDa polypeptide, putative, expressed [Oryza
           sativa Japonica Group] gi|113644643|dbj|BAF27784.1|
           Os11g0194800 [Oryza sativa Japonica Group]
           gi|215766304|dbj|BAG98532.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 74

 Score =  145 bits (365), Expect = 2e-32
 Identities = 67/70 (95%), Positives = 68/70 (97%)
 Frame = +3

Query: 135 MIIPVRCFTCGKVIGNKWDTYLDFLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLL 314
           MIIPVRCFTCGKVIGNKWD YLD LQADYTEGDALDA+GLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 315 NYNTLEKTET 344
           NYNTLEKTET
Sbjct: 61  NYNTLEKTET 70


>ref|XP_003613211.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
           [Medicago truncatula] gi|355514546|gb|AES96169.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC5 [Medicago truncatula] gi|388514743|gb|AFK45433.1|
           unknown [Medicago truncatula]
          Length = 71

 Score =  145 bits (365), Expect = 2e-32
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = +3

Query: 135 MIIPVRCFTCGKVIGNKWDTYLDFLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLL 314
           MIIPVRCFTCGKVIGNKWD+YLDFLQADYTEGDALDA+GLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDSYLDFLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 315 NYNTLEKTETN 347
           NYNT+EK E N
Sbjct: 61  NYNTMEKHEAN 71