BLASTX nr result
ID: Cimicifuga21_contig00004913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00004913
(1058 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [... 291 1e-76
emb|CBI39650.3| unnamed protein product [Vitis vinifera] 287 3e-75
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [... 285 2e-74
emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera] 285 2e-74
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex... 283 5e-74
>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
Length = 1071
Score = 291 bits (746), Expect = 1e-76
Identities = 154/229 (67%), Positives = 175/229 (76%), Gaps = 12/229 (5%)
Frame = -1
Query: 656 KELRRQHQAVLARQKNARQVASKESERAERATLVTQENLELAGTKFKPLRLPDLWIRPPF 477
K+ R + V + RQVAS+ESERAERATLVTQE L+LAGT+FKP+RL DLWIRP F
Sbjct: 631 KDPRHISEVVQMIKTLRRQVASRESERAERATLVTQEKLQLAGTRFKPIRLSDLWIRPSF 690
Query: 476 GGGG---PGTLEAHVNGFRYSTSRPDERVDIIYGNVKHAFFQPAEKETMITLLHFHLHNH 306
GG G G+LE+H NGFRYSTSRPDERVDI+YGN+KHAFFQPAEKE MITLLHFHLHNH
Sbjct: 691 GGRGRKLTGSLESHTNGFRYSTSRPDERVDIMYGNIKHAFFQPAEKE-MITLLHFHLHNH 749
Query: 305 IMVGNKKSKDVQFYVGEMDVVRTVWXXXXXXXXXXXXXXRN---------NMDFQNFVNK 153
IMVGNKK+KDVQF+V MDVV+T+ NMDFQNFVN+
Sbjct: 750 IMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNR 809
Query: 152 VNDLWGQTQLRGPGLEFEQPLRELGFHGVPYKEASAFIMPTSSCLVELV 6
VNDLWGQ Q +G LEF+QPLRELGFHGVP+K ASAFI+PTSSCLVEL+
Sbjct: 810 VNDLWGQPQFKGLDLEFDQPLRELGFHGVPHK-ASAFIVPTSSCLVELI 857
>emb|CBI39650.3| unnamed protein product [Vitis vinifera]
Length = 721
Score = 287 bits (735), Expect = 3e-75
Identities = 152/220 (69%), Positives = 172/220 (78%), Gaps = 3/220 (1%)
Frame = -1
Query: 656 KELRRQHQAVLARQKNARQVASKESERAERATLVTQENLELAGTKFKPLRLPDLWIRPPF 477
K+ R + V + RQVAS+ESERAERATLVTQE L+LAGT+FKP+RL DLWIRP F
Sbjct: 345 KDPRHISEVVQMIKTLRRQVASRESERAERATLVTQEKLQLAGTRFKPIRLSDLWIRPSF 404
Query: 476 GGGG---PGTLEAHVNGFRYSTSRPDERVDIIYGNVKHAFFQPAEKETMITLLHFHLHNH 306
GG G G+LE+H NGFRYSTSRPDERVDI+YGN+KHAFFQPAEKE MITLLHFHLHNH
Sbjct: 405 GGRGRKLTGSLESHTNGFRYSTSRPDERVDIMYGNIKHAFFQPAEKE-MITLLHFHLHNH 463
Query: 305 IMVGNKKSKDVQFYVGEMDVVRTVWXXXXXXXXXXXXXXRNNMDFQNFVNKVNDLWGQTQ 126
IMVGNKK+KDVQF+V MD R + NMDFQNFVN+VNDLWGQ Q
Sbjct: 464 IMVGNKKTKDVQFFVEVMDRDR---------------KNKINMDFQNFVNRVNDLWGQPQ 508
Query: 125 LRGPGLEFEQPLRELGFHGVPYKEASAFIMPTSSCLVELV 6
+G LEF+QPLRELGFHGVP+K ASAFI+PTSSCLVEL+
Sbjct: 509 FKGLDLEFDQPLRELGFHGVPHK-ASAFIVPTSSCLVELI 547
>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
Length = 1083
Score = 285 bits (728), Expect = 2e-74
Identities = 157/263 (59%), Positives = 180/263 (68%), Gaps = 26/263 (9%)
Frame = -1
Query: 716 NIPNKGFGTSYNYHSQEMSK--------------KELRRQHQAVLARQKNARQVASKESE 579
N+P GT++N H K K+ R + V + RQV ++ESE
Sbjct: 596 NVP----GTAFNPHDANSLKFQGSIYLKEVSFRSKDPRHISEVVQGIKTLRRQVVARESE 651
Query: 578 RAERATLVTQENLELAGTKFKPLRLPDLWIRPPFGGGG---PGTLEAHVNGFRYSTSRPD 408
RAERATLVTQE L+LAG KFKP++L LWIRPPFGG G GTLEAHVNGFRYSTSRPD
Sbjct: 652 RAERATLVTQEKLQLAGNKFKPIKLFGLWIRPPFGGRGRKLSGTLEAHVNGFRYSTSRPD 711
Query: 407 ERVDIIYGNVKHAFFQPAEKETMITLLHFHLHNHIMVGNKKSKDVQFYVGEMDVVRTVWX 228
ERVDI+YGN+KHAFFQP E E MITL+HFHLHNHIMVG KK+KDVQFYV MDVV+T+
Sbjct: 712 ERVDIMYGNIKHAFFQPVENE-MITLIHFHLHNHIMVGTKKTKDVQFYVEVMDVVQTLGS 770
Query: 227 XXXXXXXXXXXXXRN---------NMDFQNFVNKVNDLWGQTQLRGPGLEFEQPLRELGF 75
NMDFQ+FVN+VNDLWGQ Q G LEF+QPLRELGF
Sbjct: 771 GKRSAYDPDEIEEEQRERDRKNKVNMDFQSFVNRVNDLWGQPQFSGLDLEFDQPLRELGF 830
Query: 74 HGVPYKEASAFIMPTSSCLVELV 6
HGVPYK +SAFI+PTSSCLVEL+
Sbjct: 831 HGVPYK-SSAFIVPTSSCLVELI 852
>emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]
Length = 1083
Score = 285 bits (728), Expect = 2e-74
Identities = 157/263 (59%), Positives = 180/263 (68%), Gaps = 26/263 (9%)
Frame = -1
Query: 716 NIPNKGFGTSYNYHSQEMSK--------------KELRRQHQAVLARQKNARQVASKESE 579
N+P GT++N H K K+ R + V + RQV ++ESE
Sbjct: 596 NVP----GTAFNPHDANSLKFQGSIYLKEVSFRSKDPRHISEVVQGIKTLRRQVVARESE 651
Query: 578 RAERATLVTQENLELAGTKFKPLRLPDLWIRPPFGGGG---PGTLEAHVNGFRYSTSRPD 408
RAERATLVTQE L+LAG KFKP++L LWIRPPFGG G GTLEAHVNGFRYSTSRPD
Sbjct: 652 RAERATLVTQEKLQLAGNKFKPIKLFGLWIRPPFGGRGRKLSGTLEAHVNGFRYSTSRPD 711
Query: 407 ERVDIIYGNVKHAFFQPAEKETMITLLHFHLHNHIMVGNKKSKDVQFYVGEMDVVRTVWX 228
ERVDI+YGN+KHAFFQP E E MITL+HFHLHNHIMVG KK+KDVQFYV MDVV+T+
Sbjct: 712 ERVDIMYGNIKHAFFQPVENE-MITLIHFHLHNHIMVGTKKTKDVQFYVEVMDVVQTLGS 770
Query: 227 XXXXXXXXXXXXXRN---------NMDFQNFVNKVNDLWGQTQLRGPGLEFEQPLRELGF 75
NMDFQ+FVN+VNDLWGQ Q G LEF+QPLRELGF
Sbjct: 771 GKRSAYDPDEIEEEQRERDRKNKVNMDFQSFVNRVNDLWGQPQFSGLDLEFDQPLRELGF 830
Query: 74 HGVPYKEASAFIMPTSSCLVELV 6
HGVPYK +SAFI+PTSSCLVEL+
Sbjct: 831 HGVPYK-SSAFIVPTSSCLVELI 852
>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
[Cucumis sativus]
Length = 1073
Score = 283 bits (724), Expect = 5e-74
Identities = 148/229 (64%), Positives = 173/229 (75%), Gaps = 12/229 (5%)
Frame = -1
Query: 656 KELRRQHQAVLARQKNARQVASKESERAERATLVTQENLELAGTKFKPLRLPDLWIRPPF 477
K+ R + V + RQV ++ESERAERATLVTQE L+LAG +FKP+RLP+LWIRP F
Sbjct: 637 KDPRHISEVVQLIKTLRRQVVARESERAERATLVTQEKLQLAGNRFKPIRLPELWIRPAF 696
Query: 476 GGGG---PGTLEAHVNGFRYSTSRPDERVDIIYGNVKHAFFQPAEKETMITLLHFHLHNH 306
GG G PGTLEAH+NGFRY+T+R +ERVDI++GNVKHAFFQPAE E MITLLHFHLHNH
Sbjct: 697 GGRGRKLPGTLEAHLNGFRYATTRSEERVDIMFGNVKHAFFQPAENE-MITLLHFHLHNH 755
Query: 305 IMVGNKKSKDVQFYVGEMDVVRTVWXXXXXXXXXXXXXXRN---------NMDFQNFVNK 153
IMVGNKK+KDVQFYV MDVV+T+ NMDFQ+FVN+
Sbjct: 756 IMVGNKKTKDVQFYVEVMDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNR 815
Query: 152 VNDLWGQTQLRGPGLEFEQPLRELGFHGVPYKEASAFIMPTSSCLVELV 6
VNDLWGQ Q G LEF+QPLRELGFHGVPYK +SAFI+PTS+CLVEL+
Sbjct: 816 VNDLWGQPQFGGLDLEFDQPLRELGFHGVPYK-SSAFIVPTSTCLVELI 863