BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004912
         (1247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   349   3e-95
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   340   2e-92
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   340   2e-92
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...   335   6e-91
emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]   335   6e-91

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  349 bits (895), Expect(2) = 3e-95
 Identities = 189/311 (60%), Positives = 229/311 (73%), Gaps = 31/311 (9%)
 Frame = -3

Query: 969  EKLQLAGTKCESIRLPDLWIRPSFGERG---PGTLEAHGDGFRYSSTSRPDEGVVDVMYG 799
            EKLQLAGT+ + IRL DLWIRPSFG RG    G+LE+H +GFRYS TSRPDE V D+MYG
Sbjct: 667  EKLQLAGTRFKPIRLSDLWIRPSFGGRGRKLTGSLESHTNGFRYS-TSRPDERV-DIMYG 724

Query: 798  NVKHAFFQPAEKETTITLLHFHLHNQVIVGNKNSKDVQFYVXXXXXXXXXI--------- 646
            N+KHAFFQPAEKE  ITLLHFHLHN ++VGNK +KDVQF+V                   
Sbjct: 725  NIKHAFFQPAEKEM-ITLLHFHLHNHIMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDP 783

Query: 645  ----------------NMDFQNFVNKVNDDLWGQRQ---IGLKFEQPLRELGFHGVPYKA 523
                            NMDFQNFVN+VND LWGQ Q   + L+F+QPLRELGFHGVP+KA
Sbjct: 784  DEIEEEQRERDRKNKINMDFQNFVNRVND-LWGQPQFKGLDLEFDQPLRELGFHGVPHKA 842

Query: 522  PAFIMPTSSCLVELVGDPFLVITLSEVEMMNLERVGIDMAIGQENFDIAIVFKDFERDVV 343
             AFI+PTSSCLVEL+  PFLVITLSE+E++NLERVG    +GQ+NFD+ IVFKDF+RDV+
Sbjct: 843  SAFIVPTSSCLVELIETPFLVITLSEIEIVNLERVG----LGQKNFDMTIVFKDFKRDVL 898

Query: 342  RIDSIPITSLDDILEWLDLEHIKNYETGRNLNWKYLLKAIRDDPDKYMVEESAWEFLNVE 163
            RIDSIP TSLD I EWLD   +K YE+  NLNW+ +LK I +DP+K+ +E+  WEFLN+E
Sbjct: 899  RIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITEDPEKF-IEDGGWEFLNLE 957

Query: 162  GIDSDSEDTRD 130
              DSDSE++++
Sbjct: 958  VSDSDSENSQE 968



 Score = 27.3 bits (59), Expect(2) = 3e-95
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 1076 SERATLVALEKLQLAG 1029
            +ERATLV  EKLQLAG
Sbjct: 658  AERATLVTQEKLQLAG 673



 Score = 57.0 bits (136), Expect = 1e-05
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -1

Query: 1217 IMSANQEMSKNELWRQHPAALSRQEIEENARRLAWGESGSGDGHQVASERATLVALEKL 1041
            + S NQEMSK EL RQH A L+RQ+ EE ARRLA G SG+GD          L+A + +
Sbjct: 487  LRSDNQEMSKEELRRQHQAELARQKNEETARRLAGGGSGAGDNRGAVKATGDLIAYKNV 545


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
            [Cucumis sativus]
          Length = 1073

 Score =  340 bits (871), Expect(2) = 2e-92
 Identities = 180/311 (57%), Positives = 221/311 (71%), Gaps = 31/311 (9%)
 Frame = -3

Query: 969  EKLQLAGTKCESIRLPDLWIRPSFGERG---PGTLEAHGDGFRYSSTSRPDEGVVDVMYG 799
            EKLQLAG + + IRLP+LWIRP+FG RG   PGTLEAH +GFRY++T   +   VD+M+G
Sbjct: 673  EKLQLAGNRFKPIRLPELWIRPAFGGRGRKLPGTLEAHLNGFRYATTRSEER--VDIMFG 730

Query: 798  NVKHAFFQPAEKETTITLLHFHLHNQVIVGNKNSKDVQFYVXXXXXXXXXI--------- 646
            NVKHAFFQPAE E  ITLLHFHLHN ++VGNK +KDVQFYV                   
Sbjct: 731  NVKHAFFQPAENEM-ITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTIGGGKRSAYDP 789

Query: 645  ----------------NMDFQNFVNKVNDDLWGQRQIG---LKFEQPLRELGFHGVPYKA 523
                            NMDFQ+FVN+VND LWGQ Q G   L+F+QPLRELGFHGVPYK+
Sbjct: 790  DEIEEEQRERDRKNKINMDFQSFVNRVND-LWGQPQFGGLDLEFDQPLRELGFHGVPYKS 848

Query: 522  PAFIMPTSSCLVELVGDPFLVITLSEVEMMNLERVGIDMAIGQENFDIAIVFKDFERDVV 343
             AFI+PTS+CLVEL+  PFLV+TL E+E++NLERVG     GQ+NFD+ IVFKDF+RDV+
Sbjct: 849  SAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVGF----GQKNFDMTIVFKDFKRDVL 904

Query: 342  RIDSIPITSLDDILEWLDLEHIKNYETGRNLNWKYLLKAIRDDPDKYMVEESAWEFLNVE 163
            RIDSIP TSLD I EWLD   IK YE+  NLNW+ +LK I +DP  + ++E  WEFLN+E
Sbjct: 905  RIDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTITEDPQSF-IDEGGWEFLNLE 963

Query: 162  GIDSDSEDTRD 130
              DS+SE++ +
Sbjct: 964  ATDSESENSEE 974



 Score = 27.3 bits (59), Expect(2) = 2e-92
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 1076 SERATLVALEKLQLAG 1029
            +ERATLV  EKLQLAG
Sbjct: 664  AERATLVTQEKLQLAG 679


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  340 bits (871), Expect(2) = 2e-92
 Identities = 180/311 (57%), Positives = 221/311 (71%), Gaps = 31/311 (9%)
 Frame = -3

Query: 969  EKLQLAGTKCESIRLPDLWIRPSFGERG---PGTLEAHGDGFRYSSTSRPDEGVVDVMYG 799
            EKLQLAG + + IRLP+LWIRP+FG RG   PGTLEAH +GFRY++T   +   VD+M+G
Sbjct: 673  EKLQLAGNRFKPIRLPELWIRPAFGGRGRKLPGTLEAHLNGFRYATTRSEER--VDIMFG 730

Query: 798  NVKHAFFQPAEKETTITLLHFHLHNQVIVGNKNSKDVQFYVXXXXXXXXXI--------- 646
            NVKHAFFQPAE E  ITLLHFHLHN ++VGNK +KDVQFYV                   
Sbjct: 731  NVKHAFFQPAENEM-ITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTIGGGKRSAYDP 789

Query: 645  ----------------NMDFQNFVNKVNDDLWGQRQIG---LKFEQPLRELGFHGVPYKA 523
                            NMDFQ+FVN+VND LWGQ Q G   L+F+QPLRELGFHGVPYK+
Sbjct: 790  DEIEEEQRERDRKNKINMDFQSFVNRVND-LWGQPQFGGLDLEFDQPLRELGFHGVPYKS 848

Query: 522  PAFIMPTSSCLVELVGDPFLVITLSEVEMMNLERVGIDMAIGQENFDIAIVFKDFERDVV 343
             AFI+PTS+CLVEL+  PFLV+TL E+E++NLERVG     GQ+NFD+ IVFKDF+RDV+
Sbjct: 849  SAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVGF----GQKNFDMTIVFKDFKRDVL 904

Query: 342  RIDSIPITSLDDILEWLDLEHIKNYETGRNLNWKYLLKAIRDDPDKYMVEESAWEFLNVE 163
            RIDSIP TSLD I EWLD   IK YE+  NLNW+ +LK I +DP  + ++E  WEFLN+E
Sbjct: 905  RIDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTITEDPQSF-IDEGGWEFLNLE 963

Query: 162  GIDSDSEDTRD 130
              DS+SE++ +
Sbjct: 964  ATDSESENSEE 974



 Score = 27.3 bits (59), Expect(2) = 2e-92
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 1076 SERATLVALEKLQLAG 1029
            +ERATLV  EKLQLAG
Sbjct: 664  AERATLVTQEKLQLAG 679


>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score =  335 bits (858), Expect(2) = 6e-91
 Identities = 182/311 (58%), Positives = 219/311 (70%), Gaps = 31/311 (9%)
 Frame = -3

Query: 969  EKLQLAGTKCESIRLPDLWIRPSFGERG---PGTLEAHGDGFRYSSTSRPDEGVVDVMYG 799
            EKLQLAG K + I+L  LWIRP FG RG    GTLEAH +GFRYS TSRPDE V D+MYG
Sbjct: 662  EKLQLAGNKFKPIKLFGLWIRPPFGGRGRKLSGTLEAHVNGFRYS-TSRPDERV-DIMYG 719

Query: 798  NVKHAFFQPAEKETTITLLHFHLHNQVIVGNKNSKDVQFYVXXXXXXXXXI--------- 646
            N+KHAFFQP E E  ITL+HFHLHN ++VG K +KDVQFYV                   
Sbjct: 720  NIKHAFFQPVENEM-ITLIHFHLHNHIMVGTKKTKDVQFYVEVMDVVQTLGSGKRSAYDP 778

Query: 645  ----------------NMDFQNFVNKVNDDLWGQRQ---IGLKFEQPLRELGFHGVPYKA 523
                            NMDFQ+FVN+VND LWGQ Q   + L+F+QPLRELGFHGVPYK+
Sbjct: 779  DEIEEEQRERDRKNKVNMDFQSFVNRVND-LWGQPQFSGLDLEFDQPLRELGFHGVPYKS 837

Query: 522  PAFIMPTSSCLVELVGDPFLVITLSEVEMMNLERVGIDMAIGQENFDIAIVFKDFERDVV 343
             AFI+PTSSCLVEL+  PFLVITL+E+E++NLERVG    +GQ+NFD+ IVFKDF+RDV+
Sbjct: 838  SAFIVPTSSCLVELIETPFLVITLAEIEIVNLERVG----LGQKNFDMTIVFKDFKRDVL 893

Query: 342  RIDSIPITSLDDILEWLDLEHIKNYETGRNLNWKYLLKAIRDDPDKYMVEESAWEFLNVE 163
            RIDSIP TS+D I EWLD   IK YE+  NLNW+ +LK I DDP  + +++  WEFLN+E
Sbjct: 894  RIDSIPSTSIDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSF-IDDGGWEFLNME 952

Query: 162  GIDSDSEDTRD 130
              DSDSE + +
Sbjct: 953  ASDSDSEHSEE 963



 Score = 27.3 bits (59), Expect(2) = 6e-91
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 1076 SERATLVALEKLQLAG 1029
            +ERATLV  EKLQLAG
Sbjct: 653  AERATLVTQEKLQLAG 668



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = -1

Query: 1235 TFMATLIMSANQEMSKNELWRQHPAALSRQEIEENARRLAWGESGSGDGHQVASERATLV 1056
            T   T + S NQE+SK EL RQH A L+RQ+ EE ARRLA G S +GD H  +   + L+
Sbjct: 476  TLSKTTLRSDNQEISKEELRRQHQAELARQKNEETARRLAGGGSAAGDNHGASKTSSDLI 535

Query: 1055 ALEKL 1041
            A + +
Sbjct: 536  AYKNV 540


>emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]
          Length = 1083

 Score =  335 bits (858), Expect(2) = 6e-91
 Identities = 182/311 (58%), Positives = 219/311 (70%), Gaps = 31/311 (9%)
 Frame = -3

Query: 969  EKLQLAGTKCESIRLPDLWIRPSFGERG---PGTLEAHGDGFRYSSTSRPDEGVVDVMYG 799
            EKLQLAG K + I+L  LWIRP FG RG    GTLEAH +GFRYS TSRPDE V D+MYG
Sbjct: 662  EKLQLAGNKFKPIKLFGLWIRPPFGGRGRKLSGTLEAHVNGFRYS-TSRPDERV-DIMYG 719

Query: 798  NVKHAFFQPAEKETTITLLHFHLHNQVIVGNKNSKDVQFYVXXXXXXXXXI--------- 646
            N+KHAFFQP E E  ITL+HFHLHN ++VG K +KDVQFYV                   
Sbjct: 720  NIKHAFFQPVENEM-ITLIHFHLHNHIMVGTKKTKDVQFYVEVMDVVQTLGSGKRSAYDP 778

Query: 645  ----------------NMDFQNFVNKVNDDLWGQRQ---IGLKFEQPLRELGFHGVPYKA 523
                            NMDFQ+FVN+VND LWGQ Q   + L+F+QPLRELGFHGVPYK+
Sbjct: 779  DEIEEEQRERDRKNKVNMDFQSFVNRVND-LWGQPQFSGLDLEFDQPLRELGFHGVPYKS 837

Query: 522  PAFIMPTSSCLVELVGDPFLVITLSEVEMMNLERVGIDMAIGQENFDIAIVFKDFERDVV 343
             AFI+PTSSCLVEL+  PFLVITL+E+E++NLERVG    +GQ+NFD+ IVFKDF+RDV+
Sbjct: 838  SAFIVPTSSCLVELIETPFLVITLAEIEIVNLERVG----LGQKNFDMTIVFKDFKRDVL 893

Query: 342  RIDSIPITSLDDILEWLDLEHIKNYETGRNLNWKYLLKAIRDDPDKYMVEESAWEFLNVE 163
            RIDSIP TS+D I EWLD   IK YE+  NLNW+ +LK I DDP  + +++  WEFLN+E
Sbjct: 894  RIDSIPSTSIDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSF-IDDGGWEFLNME 952

Query: 162  GIDSDSEDTRD 130
              DSDSE + +
Sbjct: 953  ASDSDSEHSEE 963



 Score = 27.3 bits (59), Expect(2) = 6e-91
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 1076 SERATLVALEKLQLAG 1029
            +ERATLV  EKLQLAG
Sbjct: 653  AERATLVTQEKLQLAG 668



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = -1

Query: 1235 TFMATLIMSANQEMSKNELWRQHPAALSRQEIEENARRLAWGESGSGDGHQVASERATLV 1056
            T   T + S NQE+SK EL RQH A L+RQ+ EE ARRLA G S +GD H  +   + L+
Sbjct: 476  TLSKTTLRSDNQEISKEELRRQHQAELARQKNEETARRLAGGGSAAGDNHGASKTSSDLI 535

Query: 1055 ALEKL 1041
            A + +
Sbjct: 536  AYKNV 540