BLASTX nr result

ID: Cimicifuga21_contig00004900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004900
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282873.1| PREDICTED: acyl carrier protein 2, mitochond...   110   3e-22
emb|CBI30281.3| unnamed protein product [Vitis vinifera]              105   1e-20
gb|ABK23736.1| unknown [Picea sitchensis]                              75   2e-11
gb|EIE21304.1| acyl carrier protein [Coccomyxa subellipsoidea C-...    73   6e-11
ref|XP_002465269.1| hypothetical protein SORBIDRAFT_01g035260 [S...    72   1e-10

>ref|XP_002282873.1| PREDICTED: acyl carrier protein 2, mitochondrial [Vitis vinifera]
          Length = 139

 Score =  110 bits (275), Expect = 3e-22
 Identities = 59/117 (50%), Positives = 78/117 (66%), Gaps = 3/117 (2%)
 Frame = -3

Query: 680 CSNGGER--ARTLGLIEGSRVFSSQSAACSA-ENLLDKEEVTTRLVDLLKAIPFVDPAKV 510
           C N   +  A  LG + G+RVFS  +AA S+  +LL+KEEVT+R++ LLK+ PF+DP+KV
Sbjct: 23  CLNSSSKRGATVLGFMGGARVFSQSAAAASSPSSLLEKEEVTSRIIHLLKSTPFIDPSKV 82

Query: 509 TPSANFKDGLQLDTLDKXXXXXXXXXXXXXXIPDTEAANFSTTAHVIDYIAAHPQAK 339
           +P+A+FK+ LQLD LD               IPDTEA   ST AH+IDYI+ HPQAK
Sbjct: 83  SPTASFKNDLQLDMLDNVEVMMAVEEEFAVDIPDTEANKISTAAHLIDYISTHPQAK 139


>emb|CBI30281.3| unnamed protein product [Vitis vinifera]
          Length = 102

 Score =  105 bits (261), Expect = 1e-20
 Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
 Frame = -3

Query: 635 GSRVFSSQSAACSA-ENLLDKEEVTTRLVDLLKAIPFVDPAKVTPSANFKDGLQLDTLDK 459
           G+RVFS  +AA S+  +LL+KEEVT+R++ LLK+ PF+DP+KV+P+A+FK+ LQLD LD 
Sbjct: 3   GARVFSQSAAAASSPSSLLEKEEVTSRIIHLLKSTPFIDPSKVSPTASFKNDLQLDMLDN 62

Query: 458 XXXXXXXXXXXXXXIPDTEAANFSTTAHVIDYIAAHPQAK 339
                         IPDTEA   ST AH+IDYI+ HPQAK
Sbjct: 63  VEVMMAVEEEFAVDIPDTEANKISTAAHLIDYISTHPQAK 102


>gb|ABK23736.1| unknown [Picea sitchensis]
          Length = 128

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
 Frame = -3

Query: 704 FRSSIQSHC----SNGGERARTLGLIEGSRVFSSQSAACSAENLLDKEEVTTRLVDLLKA 537
           FR+++ +H     + G    R +G    S V    S+  S+ + LDK+EVT R++ ++K+
Sbjct: 3   FRNALLNHIRVNVNQGRPTLRVVGWGSWSNVSRWMSSEGSSGSFLDKDEVTERVLSVVKS 62

Query: 536 IPFVDPAKVTPSANFKDGLQLDTLDKXXXXXXXXXXXXXXIPDTEAANFSTTAHVIDYIA 357
            P +DP+KV P+ +F+  L LD+LD               IPD EA    + +  IDYIA
Sbjct: 63  FPKIDPSKVNPNVHFQKDLGLDSLDTVEIVMALEEEFAMEIPDKEADKIDSCSLAIDYIA 122

Query: 356 AHPQAK 339
           +HP AK
Sbjct: 123 SHPMAK 128


>gb|EIE21304.1| acyl carrier protein [Coccomyxa subellipsoidea C-169]
          Length = 127

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 49/121 (40%), Positives = 64/121 (52%)
 Frame = -3

Query: 701 RSSIQSHCSNGGERARTLGLIEGSRVFSSQSAACSAENLLDKEEVTTRLVDLLKAIPFVD 522
           RSSI +  S    R + +G         S   A S    LDK  VT R++D++K    VD
Sbjct: 11  RSSILTRVSIPVNRVQVVGAASTL----SLVRAFSESTYLDKNIVTDRVLDVVKNFDKVD 66

Query: 521 PAKVTPSANFKDGLQLDTLDKXXXXXXXXXXXXXXIPDTEAANFSTTAHVIDYIAAHPQA 342
           P+KVTPS++F+  L LD+LD               IPD+EA    +TA  I+YIAAHPQA
Sbjct: 67  PSKVTPSSSFQKDLGLDSLDTVEVVMAFEEEFAVEIPDSEADKILSTADAINYIAAHPQA 126

Query: 341 K 339
           K
Sbjct: 127 K 127


>ref|XP_002465269.1| hypothetical protein SORBIDRAFT_01g035260 [Sorghum bicolor]
           gi|241919123|gb|EER92267.1| hypothetical protein
           SORBIDRAFT_01g035260 [Sorghum bicolor]
          Length = 131

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = -3

Query: 635 GSRVFSSQSAACSAENLLDKEEVTTRLVDLLKAIPFVD-PAKVTPSANFKDGLQLDTLDK 459
           G R  SS+ A  S    LDK EVT R+V ++K+ P +D P+KVTP A+FK+ L LD+LD 
Sbjct: 35  GRRWMSSEDAKGS---FLDKSEVTERIVKVVKSFPKIDDPSKVTPDAHFKNDLGLDSLDA 91

Query: 458 XXXXXXXXXXXXXXIPDTEAANFSTTAHVIDYIAAHPQAK 339
                         IPD EA    +    +D+IAAHPQAK
Sbjct: 92  VEVVMALEEEFRFEIPDNEADKIDSIKVAVDFIAAHPQAK 131


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