BLASTX nr result

ID: Cimicifuga21_contig00004886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004886
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275559.2| PREDICTED: uncharacterized protein LOC100262...   353   6e-95
emb|CBI40412.3| unnamed protein product [Vitis vinifera]              353   6e-95
emb|CAN73362.1| hypothetical protein VITISV_006167 [Vitis vinifera]   353   6e-95
ref|XP_003546166.1| PREDICTED: 39S ribosomal protein L46, mitoch...   349   1e-93
gb|ACU19535.1| unknown [Glycine max]                                  347   3e-93

>ref|XP_002275559.2| PREDICTED: uncharacterized protein LOC100262014 [Vitis vinifera]
          Length = 977

 Score =  353 bits (906), Expect = 6e-95
 Identities = 167/208 (80%), Positives = 186/208 (89%)
 Frame = +2

Query: 485  EKIVASVLFERLPVVIPKIDPVVYAFQEFAYRWTQQYRRKYPDEVLGKSDTRGKGDYQID 664
            EKIVASVLFERLPVVIPKIDPVVYAFQEF++RW QQYRRKYPDE+  +S+ RGKGDYQID
Sbjct: 769  EKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYRRKYPDEIFKRSEERGKGDYQID 828

Query: 665  YVPAPRVTEADKENDRRSLQRALDRRXXXXXXXXXXXSPGGKPVWHFPEKVYETEETLRK 844
            YVPAPRVTEAD+ NDRRSLQRALDRR           +P GKPVWHFPEKVY +EETLRK
Sbjct: 829  YVPAPRVTEADENNDRRSLQRALDRRLYLLLFGTTYGAPDGKPVWHFPEKVYGSEETLRK 888

Query: 845  CAESALKSVLGDLSHTYFVGNAPFAHMVIQPTDDLPDILCFKRFFFKSQVIATNKFKIGR 1024
            CAESAL+SV+GDLSHTYFVGNAPFAHMVIQPT+++PD+  FKRFFFKSQVIATNK+ +G+
Sbjct: 889  CAESALESVIGDLSHTYFVGNAPFAHMVIQPTENVPDLPSFKRFFFKSQVIATNKYDVGK 948

Query: 1025 CEDHVWVTKDELMEYFPEQAAFLNKMII 1108
            C+DHVWVTKDEL+EYFPEQA FLNKMII
Sbjct: 949  CKDHVWVTKDELVEYFPEQAEFLNKMII 976


>emb|CBI40412.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  353 bits (906), Expect = 6e-95
 Identities = 167/208 (80%), Positives = 186/208 (89%)
 Frame = +2

Query: 485  EKIVASVLFERLPVVIPKIDPVVYAFQEFAYRWTQQYRRKYPDEVLGKSDTRGKGDYQID 664
            EKIVASVLFERLPVVIPKIDPVVYAFQEF++RW QQYRRKYPDE+  +S+ RGKGDYQID
Sbjct: 24   EKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYRRKYPDEIFKRSEERGKGDYQID 83

Query: 665  YVPAPRVTEADKENDRRSLQRALDRRXXXXXXXXXXXSPGGKPVWHFPEKVYETEETLRK 844
            YVPAPRVTEAD+ NDRRSLQRALDRR           +P GKPVWHFPEKVY +EETLRK
Sbjct: 84   YVPAPRVTEADENNDRRSLQRALDRRLYLLLFGTTYGAPDGKPVWHFPEKVYGSEETLRK 143

Query: 845  CAESALKSVLGDLSHTYFVGNAPFAHMVIQPTDDLPDILCFKRFFFKSQVIATNKFKIGR 1024
            CAESAL+SV+GDLSHTYFVGNAPFAHMVIQPT+++PD+  FKRFFFKSQVIATNK+ +G+
Sbjct: 144  CAESALESVIGDLSHTYFVGNAPFAHMVIQPTENVPDLPSFKRFFFKSQVIATNKYDVGK 203

Query: 1025 CEDHVWVTKDELMEYFPEQAAFLNKMII 1108
            C+DHVWVTKDEL+EYFPEQA FLNKMII
Sbjct: 204  CKDHVWVTKDELVEYFPEQAEFLNKMII 231


>emb|CAN73362.1| hypothetical protein VITISV_006167 [Vitis vinifera]
          Length = 253

 Score =  353 bits (906), Expect = 6e-95
 Identities = 167/208 (80%), Positives = 186/208 (89%)
 Frame = +2

Query: 485  EKIVASVLFERLPVVIPKIDPVVYAFQEFAYRWTQQYRRKYPDEVLGKSDTRGKGDYQID 664
            EKIVASVLFERLPVVIPKIDPVVYAFQEF++RW QQYRRKYPDE+  +S+ RGKGDYQID
Sbjct: 45   EKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYRRKYPDEIFKRSEERGKGDYQID 104

Query: 665  YVPAPRVTEADKENDRRSLQRALDRRXXXXXXXXXXXSPGGKPVWHFPEKVYETEETLRK 844
            YVPAPRVTEAD+ NDRRSLQRALDRR           +P GKPVWHFPEKVY +EETLRK
Sbjct: 105  YVPAPRVTEADENNDRRSLQRALDRRLYLLLFGTTYGAPDGKPVWHFPEKVYGSEETLRK 164

Query: 845  CAESALKSVLGDLSHTYFVGNAPFAHMVIQPTDDLPDILCFKRFFFKSQVIATNKFKIGR 1024
            CAESAL+SV+GDLSHTYFVGNAPFAHMVIQPT+++PD+  FKRFFFKSQVIATNK+ +G+
Sbjct: 165  CAESALESVIGDLSHTYFVGNAPFAHMVIQPTENVPDLPSFKRFFFKSQVIATNKYDVGK 224

Query: 1025 CEDHVWVTKDELMEYFPEQAAFLNKMII 1108
            C+DHVWVTKDEL+EYFPEQA FLNKMII
Sbjct: 225  CKDHVWVTKDELVEYFPEQAEFLNKMII 252


>ref|XP_003546166.1| PREDICTED: 39S ribosomal protein L46, mitochondrial-like [Glycine
            max]
          Length = 230

 Score =  349 bits (895), Expect = 1e-93
 Identities = 168/209 (80%), Positives = 181/209 (86%)
 Frame = +2

Query: 485  EKIVASVLFERLPVVIPKIDPVVYAFQEFAYRWTQQYRRKYPDEVLGKSDTRGKGDYQID 664
            E +VASVLFERLPVVIPKIDPVVYAFQEF++RW QQY+R+YPDE L KSD RGKGDYQID
Sbjct: 22   ENLVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRYPDEFLDKSDARGKGDYQID 81

Query: 665  YVPAPRVTEADKENDRRSLQRALDRRXXXXXXXXXXXSPGGKPVWHFPEKVYETEETLRK 844
            YVPAPRVTEADK NDRRSLQRALDRR           +P GKPVWHFPEKVYE+E+T+RK
Sbjct: 82   YVPAPRVTEADKNNDRRSLQRALDRRLYLLLYGNAYGAPSGKPVWHFPEKVYESEDTMRK 141

Query: 845  CAESALKSVLGDLSHTYFVGNAPFAHMVIQPTDDLPDILCFKRFFFKSQVIATNKFKIGR 1024
            CAESALKSVLGDLS+TYFVGNAP AHMV+QPT+D      FKRFFFKSQVIA NKF IG+
Sbjct: 142  CAESALKSVLGDLSNTYFVGNAPMAHMVVQPTEDQSRSTSFKRFFFKSQVIAKNKFNIGK 201

Query: 1025 CEDHVWVTKDELMEYFPEQAAFLNKMIIS 1111
            CEDHVWVTKDELMEYFPEQA FLNKMIIS
Sbjct: 202  CEDHVWVTKDELMEYFPEQAEFLNKMIIS 230


>gb|ACU19535.1| unknown [Glycine max]
          Length = 230

 Score =  347 bits (891), Expect = 3e-93
 Identities = 167/209 (79%), Positives = 180/209 (86%)
 Frame = +2

Query: 485  EKIVASVLFERLPVVIPKIDPVVYAFQEFAYRWTQQYRRKYPDEVLGKSDTRGKGDYQID 664
            E +VASVLFERLPVVIPKIDPVVYAFQEF++RW QQY+R+YPDE L KSD RGKGDYQID
Sbjct: 22   ENLVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRYPDEFLDKSDARGKGDYQID 81

Query: 665  YVPAPRVTEADKENDRRSLQRALDRRXXXXXXXXXXXSPGGKPVWHFPEKVYETEETLRK 844
            YVPAPRVTEADK NDRRSLQRALDRR           +P GKPVWHFPEKVYE+E+T+RK
Sbjct: 82   YVPAPRVTEADKNNDRRSLQRALDRRLYLLLYGNAYGAPSGKPVWHFPEKVYESEDTMRK 141

Query: 845  CAESALKSVLGDLSHTYFVGNAPFAHMVIQPTDDLPDILCFKRFFFKSQVIATNKFKIGR 1024
            CAESALKSVLGDLS+TYFVGN P AHMV+QPT+D      FKRFFFKSQVIA NKF IG+
Sbjct: 142  CAESALKSVLGDLSNTYFVGNTPMAHMVVQPTEDQSRSTSFKRFFFKSQVIAKNKFNIGK 201

Query: 1025 CEDHVWVTKDELMEYFPEQAAFLNKMIIS 1111
            CEDHVWVTKDELMEYFPEQA FLNKMIIS
Sbjct: 202  CEDHVWVTKDELMEYFPEQAEFLNKMIIS 230


Top