BLASTX nr result

ID: Cimicifuga21_contig00004878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004878
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515161.1| conserved hypothetical protein [Ricinus comm...   141   3e-31
ref|XP_002320928.1| predicted protein [Populus trichocarpa] gi|2...   138   2e-30
ref|NP_001236491.1| uncharacterized protein LOC100306030 [Glycin...   136   9e-30
ref|XP_002280909.1| PREDICTED: uncharacterized protein LOC100262...   136   1e-29
ref|XP_002302701.1| predicted protein [Populus trichocarpa] gi|2...   131   4e-28

>ref|XP_002515161.1| conserved hypothetical protein [Ricinus communis]
           gi|223545641|gb|EEF47145.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  141 bits (356), Expect = 3e-31
 Identities = 111/278 (39%), Positives = 134/278 (48%), Gaps = 42/278 (15%)
 Frame = +3

Query: 198 HNLSRLSMCTSSSKHSMNDFEXXXXXXXXXXXXXXXXLSIESSYXXXXXXXXXXXXXXXX 377
           HNLSRLS+CTSS    M+  E                LSIES                  
Sbjct: 32  HNLSRLSVCTSS----MHTNEDDDYQDCDGMKMFMSRLSIES---------FDADEELSD 78

Query: 378 XHKRVIHHLYGATSDSDKDIGGSCLSLPVTP--------------QGCVDDHVYCSENEA 515
             K  +  +   +SDSDK+ G  C SLP TP              +  V    Y SENEA
Sbjct: 79  DEKEGVISMLDLSSDSDKEPG--CYSLPATPPRRRNRGGGGVVKLRDVVGGKEYASENEA 136

Query: 516 AVGGKGVVXXXXXXXXXXXXXXXXWLDRE-----WEKKKHK-------------AKAMDG 641
             G                     W+D +      +KKK +               +  G
Sbjct: 137 QKGNH----TRKNSRRKRRVIRERWIDSDNNNNKSDKKKEEESIGLGMCNYYGNGNSFSG 192

Query: 642 DSHE-----ITRLNSGKRSICIDLGEVKACRDLGFELEHQ---EMPRLVSCS--TMDTTS 791
           +S       ITR   GKR++C+DL EVKACRDLGFELEH+   EMP  VS S  T+DT S
Sbjct: 193 ESENGGVVVITRPKGGKRALCMDLDEVKACRDLGFELEHERMLEMPSRVSLSGSTLDT-S 251

Query: 792 SGGNSPIASWRISSPGDDPKDVKARLKVWAQAVAASAS 905
           SGGNSPIA+WRISSPGDDP+DVKARLKVWAQAVA +++
Sbjct: 252 SGGNSPIANWRISSPGDDPRDVKARLKVWAQAVALAST 289


>ref|XP_002320928.1| predicted protein [Populus trichocarpa] gi|222861701|gb|EEE99243.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  138 bits (348), Expect = 2e-30
 Identities = 120/308 (38%), Positives = 147/308 (47%), Gaps = 46/308 (14%)
 Frame = +3

Query: 123 MASDDNMTIHSSMXXXXXXXXXXXP--------HNLSRLSMCTSSS-KHSMNDFEXXXXX 275
           MASD++M + SS                     HNLSRLSMCTSS   +  +D++     
Sbjct: 1   MASDESMALLSSSVQEDDPYDHDTDDGYQPPSLHNLSRLSMCTSSLYTNEDDDYQDCDGM 60

Query: 276 XXXXXXXXXXXLSIESSYXXXXXXXXXXXXXXXXXHKRVIH-HLYGATSDSDKDIGGSCL 452
                         +                    HK   + +    +SDSD++ G  C 
Sbjct: 61  KMFLSRLPAENFDADEELSDD--------------HKEGNNKNTLDLSSDSDEEPG--CY 104

Query: 453 SLPVTP-----QGCVDDHV-------YCSENEAAVGGKGVVXXXXXXXXXXXXXXXX-WL 593
           SLP TP     +G + + V       Y SENEA    KG+                  W+
Sbjct: 105 SLPATPPRRRNRGGLINQVQLLGAKDYASENEAQ---KGITRQKMRKNLRKRRVIRERWM 161

Query: 594 DREWEKKKHKAKAMDGDSHE-----------------ITRLNSGKRSICIDLGEVKACRD 722
           D      K K + M G S+                  ITR   G+RS+C+DL EVKACRD
Sbjct: 162 DNNNMSFKKKEEEMTGVSNYGYCNSFSGESEGGGLVVITRPKGGRRSLCMDLDEVKACRD 221

Query: 723 LGFELEHQ---EMPRLVSCS--TMDTTSSGGNSPIASWRISSPGDDPKDVKARLKVWAQA 887
           LGFELEH+   EMP  VS S  T+DT SSGGNSPIA+WRISSPGDDP+DVKARLKVWAQA
Sbjct: 222 LGFELEHERMLEMPGRVSLSGSTLDT-SSGGNSPIANWRISSPGDDPRDVKARLKVWAQA 280

Query: 888 VA-ASASR 908
           VA ASASR
Sbjct: 281 VAIASASR 288


>ref|NP_001236491.1| uncharacterized protein LOC100306030 [Glycine max]
           gi|255627327|gb|ACU14008.1| unknown [Glycine max]
          Length = 240

 Score =  136 bits (343), Expect = 9e-30
 Identities = 111/277 (40%), Positives = 135/277 (48%), Gaps = 15/277 (5%)
 Frame = +3

Query: 123 MASDDNMTIHSSMXXXXXXXXXXX--PHNLSRLSMCTSSSKHSMNDFEXXXXXXXXXXXX 296
           MASD+ M  HS               PHNLSRLS+CT S+    +D +            
Sbjct: 1   MASDETMNFHSCSLHEDDFDDDDDDHPHNLSRLSVCTGSTFGVDDDVDNLASMCVSH--- 57

Query: 297 XXXXLSIESSYXXXXXXXXXXXXXXXXXHKRVIHHLYGATSDSDKDIGGSCLSLPVTPQG 476
               LSIES                              +SDS+ ++G SC SLP TP  
Sbjct: 58  ----LSIESFDADGEL-----------------------SSDSENELG-SCYSLPSTPPR 89

Query: 477 CVDD-HVYCSENEAAVGGKGVVXXXXXXXXXXXXXXXXWLDREWEKKK-HKAKAMDGDSH 650
                  Y S+N     G  +                 W    +EK K  K + + GDS 
Sbjct: 90  MRKQLKDYASDN-----GNEITNKSDPRRRRRSFRRERW---GFEKTKIRKEEGLSGDSD 141

Query: 651 E-----ITRLNSGKRSICIDLGEVKACRDLGFELEHQEMPRL-----VSCSTMDTTSSGG 800
           +     ITR   G RS+C+DL EVKACRDLGFELEH+ M  +      S ST+DT SSG 
Sbjct: 142 QSGVMLITRPKGGIRSLCMDLEEVKACRDLGFELEHERMLEIPSRLSFSNSTLDT-SSGS 200

Query: 801 NSPIASWRISSPGDDPKDVKARLKVWAQAVA-ASASR 908
           NSPIA+WRIS+PGDDP+DVKARLKVWAQAVA ASAS+
Sbjct: 201 NSPIANWRISAPGDDPRDVKARLKVWAQAVALASASK 237


>ref|XP_002280909.1| PREDICTED: uncharacterized protein LOC100262404 [Vitis vinifera]
          Length = 292

 Score =  136 bits (342), Expect = 1e-29
 Identities = 109/268 (40%), Positives = 131/268 (48%), Gaps = 30/268 (11%)
 Frame = +3

Query: 195 PHNLSRLSMCTSSSKHSMNDFEXXXXXXXXXXXXXXXXLSIESSYXXXXXXXXXXXXXXX 374
           PHNLSRLSMC  +S     D +                + IESS                
Sbjct: 40  PHNLSRLSMCNLNSMSLDEDEDDANGVGTSI-------MLIESS--------DGDADEEL 84

Query: 375 XXHKRVIHHLYGATSDSDKDIGGSCLSLPVTPQG---------CVDDHVYCSENEAAVGG 527
              K     L G  SDSDK+ G  C SLP TP            V    Y SENEA    
Sbjct: 85  SDDKEGKEELGGLLSDSDKEPG--CYSLPATPPRRRNRGGLLKVVGVKEYASENEAQKSS 142

Query: 528 -KGVVXXXXXXXXXXXXXXXXWLDREWEKKKHKAK---------AMDGDSHE-----ITR 662
            K  +                W +R+ ++++             +  G+S       ITR
Sbjct: 143 LKQRMKRRRAKVVREKREEMTWDNRKKKEEEGYGSVPCGGGGFTSFSGESEGAGLVVITR 202

Query: 663 LNSGKRSICIDLGEVKACRDLGFELEHQEMPRL-----VSCSTMDTTSSGGNSPIASWRI 827
              G+RS+C+DL EVKACRDLGFELEH+ M  +     +S ST++T SSGGNSPIASWRI
Sbjct: 203 PKGGRRSLCMDLEEVKACRDLGFELEHERMLEIPTRISISGSTLET-SSGGNSPIASWRI 261

Query: 828 SSPGDDPKDVKARLKVWAQAVA-ASASR 908
           SSPGDDP+DVKARLKVWAQAVA AS SR
Sbjct: 262 SSPGDDPRDVKARLKVWAQAVALASTSR 289


>ref|XP_002302701.1| predicted protein [Populus trichocarpa] gi|222844427|gb|EEE81974.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  131 bits (329), Expect = 4e-28
 Identities = 96/210 (45%), Positives = 116/210 (55%), Gaps = 34/210 (16%)
 Frame = +3

Query: 381 HKRVIHHLYGATSDSDKDIGGSCLSLPVTP-----QGCVDDHV-------YCSENEAAVG 524
           HK ++H     +SDSDK+ G  C SLP TP     +G   + V       Y SENEA  G
Sbjct: 28  HKNILH----LSSDSDKETG--CYSLPATPPRWRNRGGPRNQVQLIGVTDYASENEAQKG 81

Query: 525 ------GKGVVXXXXXXXXXXXXXXXXWLDREWE----KKKHKAKAMDGDSHE-----IT 659
                  K +                 +  +E E           +  G+S       IT
Sbjct: 82  IMRQKMRKNLRKRRVIRERRMDNSNTSFKKKEEEITGLSNYGSCNSFSGESEGGGLVVIT 141

Query: 660 RLNSGKRSICIDLGEVKACRDLGFELEHQEMPRL------VSCSTMDTTSSGGNSPIASW 821
           R   G+RS+C+DL EVKACRDLGFELEH+ M  L      +S ST+DT SSGG+SPIA+W
Sbjct: 142 RPKGGRRSLCMDLEEVKACRDLGFELEHERMLELPSSRVSLSGSTLDT-SSGGDSPIANW 200

Query: 822 RISSPGDDPKDVKARLKVWAQAVA-ASASR 908
           RISSPGDDP+DVKARLKVWAQAVA ASASR
Sbjct: 201 RISSPGDDPRDVKARLKVWAQAVAVASASR 230


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