BLASTX nr result

ID: Cimicifuga21_contig00004877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004877
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71206.1| hypothetical protein VITISV_031603 [Vitis vinifera]    75   2e-11
ref|XP_002278502.1| PREDICTED: uncharacterized protein LOC100241...    73   7e-11
ref|XP_003548208.1| PREDICTED: uncharacterized protein LOC100811...    72   2e-10
ref|XP_002321900.1| predicted protein [Populus trichocarpa] gi|2...    71   3e-10
ref|XP_002510814.1| conserved hypothetical protein [Ricinus comm...    69   1e-09

>emb|CAN71206.1| hypothetical protein VITISV_031603 [Vitis vinifera]
          Length = 112

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 43/120 (35%), Positives = 64/120 (53%)
 Frame = +2

Query: 74  MDVEKKTSVNGLWTNQKHVSYLSQMEAAFVRKMLERHDARSVLTYTAVHQAPPPLDRYLP 253
           MD  +  + +G WTN+KHV +L+ MEA+FVR M E +               P LDRYLP
Sbjct: 1   MDSNRSINPSGYWTNEKHVQFLNSMEASFVRAMFESNG-----------HPLPRLDRYLP 49

Query: 254 DSFESNRDSKRQRNNTQEINDKIGVANDGTNNQKKRIMRRRYSRPHDASRDQVVPQLGKV 433
           D+ +S  D K   + T+  +  +G          K+  R   S+P+++S+DQVVPQL  +
Sbjct: 50  DTSDSTLDLK--THPTRRFSTPVGSRARSXRGADKKAXRPLSSQPYNSSQDQVVPQLESI 107


>ref|XP_002278502.1| PREDICTED: uncharacterized protein LOC100241934 [Vitis vinifera]
          Length = 112

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 43/117 (36%), Positives = 63/117 (53%)
 Frame = +2

Query: 74  MDVEKKTSVNGLWTNQKHVSYLSQMEAAFVRKMLERHDARSVLTYTAVHQAPPPLDRYLP 253
           MD  +  + +G WTN+KHV +L+ MEA+FVR M E +               P LDRYLP
Sbjct: 1   MDSNRSINPSGYWTNEKHVQFLNSMEASFVRAMFESNG-----------HPLPRLDRYLP 49

Query: 254 DSFESNRDSKRQRNNTQEINDKIGVANDGTNNQKKRIMRRRYSRPHDASRDQVVPQL 424
           D+ +S  D K   + T+  +  +G          K+  R   S+P+++S+DQVVPQL
Sbjct: 50  DTSDSTLDLK--THPTRRFSTPVGSRARSYRGADKKAGRPLSSQPYNSSQDQVVPQL 104


>ref|XP_003548208.1| PREDICTED: uncharacterized protein LOC100811730 [Glycine max]
          Length = 127

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
 Frame = +2

Query: 92  TSVNGLWTNQKHVSYLSQMEAAFVRKMLERHDARSVLTYTAVHQAPPPLDRYLPDSFESN 271
           +     WT++KHV +L+ MEA+FVR ML+ +   SV T     +   PLDRYLPDS ES 
Sbjct: 7   SEATAFWTDEKHVHFLNSMEASFVRTMLQ-NQGNSVST----TRHSLPLDRYLPDSSEST 61

Query: 272 RDSKRQRNNTQEINDKIGVANDGTNNQKKRIMRRRYSRPHDASRDQVVPQL--GKVNCKC 445
            D K    N +    K    +D      +R  RRR S+P+++S+DQ VPQ+   +    C
Sbjct: 62  LDLK---PNPRRRTIKHHAPSDSMGPTTRR-TRRRSSQPYNSSQDQAVPQVENEREGAAC 117

Query: 446 KSDKDEESGN 475
             D D+ + N
Sbjct: 118 NWDDDKRAEN 127


>ref|XP_002321900.1| predicted protein [Populus trichocarpa] gi|222868896|gb|EEF06027.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 46/134 (34%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
 Frame = +2

Query: 68  VSMDVEKKTSVNGLWTNQKHVSYLSQMEAAFVRKMLERHDARSVLTYTAVHQAPPPLDRY 247
           +S +  K       WTN++H+ +L  MEA+FVR MLE +                 LDRY
Sbjct: 5   ISNNSNKSNKTEHNWTNEEHLHFLQSMEASFVRTMLENNGPLL------------RLDRY 52

Query: 248 LPDSFESNRDSKRQRNNTQEINDKIGVANDGTNNQKKRIMRRRYSRPH---DASRDQVVP 418
           LPDS ES  D K QR       D +G +      +  +   RR+S  H   D S+DQVVP
Sbjct: 53  LPDSSESTLDLKSQRKKKHGTPDVVGASRTRMEGRVDKRSTRRFSSHHKHYDPSQDQVVP 112

Query: 419 QLGKVNCKCKSDKD 460
           Q   +    K ++D
Sbjct: 113 Q-ADIRTNDKDERD 125


>ref|XP_002510814.1| conserved hypothetical protein [Ricinus communis]
           gi|223549929|gb|EEF51416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 49/112 (43%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
 Frame = +2

Query: 110 WTNQKHVSYLSQMEAAFVRKMLERHDARSVLTYTAVHQAPPPLDRYLPDSFESNRDSKRQ 289
           WTN+KH+ +L  MEA+FVR MLE ++AR +            LDRYLPDS ES  D K Q
Sbjct: 9   WTNEKHLHFLKSMEASFVRTMLE-NNARIL-----------RLDRYLPDSSESTLDLKSQ 56

Query: 290 R---NNTQEINDKIGVANDGTNNQKKRIMRR----RYSRPHDASRDQVVPQL 424
           R   + T   +  I  +   TN +  R  RR    R S+ H  S+DQVVPQL
Sbjct: 57  RPKKHATSVDHYNISGSRSRTNGRSDRRTRRLSSNRPSQRHAPSQDQVVPQL 108


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