BLASTX nr result

ID: Cimicifuga21_contig00004872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004872
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326338.1| predicted protein [Populus trichocarpa] gi|1...   182   2e-44
emb|CCA95080.1| putative elongation factor 1-alpha, partial [Gin...   182   2e-44
emb|CCA95096.1| putative elongation factor 1-alpha, partial [Lir...   181   7e-44
gb|ABB16977.1| elongation factor 1-alpha-like protein [Solanum t...   179   2e-43
dbj|BAC23049.1| Elongation factor 1-alpha [Solanum tuberosum]         179   2e-43

>ref|XP_002326338.1| predicted protein [Populus trichocarpa] gi|118487793|gb|ABK95720.1|
           unknown [Populus trichocarpa]
           gi|222833531|gb|EEE72008.1| predicted protein [Populus
           trichocarpa]
          Length = 447

 Score =  182 bits (463), Expect = 2e-44
 Identities = 86/89 (96%), Positives = 89/89 (100%)
 Frame = -3

Query: 268 WYKGPTLLDSLDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFG 89
           WYKGPTLLD+LDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFG
Sbjct: 210 WYKGPTLLDALDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG 269

Query: 88  PTGLTTEVKSVEMHHEALQEAVPGDNVGF 2
           PTGLTTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 270 PTGLTTEVKSVEMHHEALQEALPGDNVGF 298


>emb|CCA95080.1| putative elongation factor 1-alpha, partial [Ginkgo biloba]
          Length = 164

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/89 (96%), Positives = 89/89 (100%)
 Frame = -3

Query: 268 WYKGPTLLDSLDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFG 89
           WYKGPTLLD+LDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFG
Sbjct: 5   WYKGPTLLDALDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFG 64

Query: 88  PTGLTTEVKSVEMHHEALQEAVPGDNVGF 2
           PTGLTTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 65  PTGLTTEVKSVEMHHEALQEALPGDNVGF 93


>emb|CCA95096.1| putative elongation factor 1-alpha, partial [Liriodendron
           tulipifera]
          Length = 110

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/89 (95%), Positives = 88/89 (98%)
 Frame = -3

Query: 268 WYKGPTLLDSLDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFG 89
           WYKGPTLLD+LD ISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFG
Sbjct: 16  WYKGPTLLDALDLISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG 75

Query: 88  PTGLTTEVKSVEMHHEALQEAVPGDNVGF 2
           PTGLTTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 76  PTGLTTEVKSVEMHHEALQEAIPGDNVGF 104


>gb|ABB16977.1| elongation factor 1-alpha-like protein [Solanum tuberosum]
          Length = 319

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/89 (93%), Positives = 89/89 (100%)
 Frame = -3

Query: 268 WYKGPTLLDSLDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFG 89
           WYKGPTLLD+LDQI+EPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTFG
Sbjct: 210 WYKGPTLLDALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFG 269

Query: 88  PTGLTTEVKSVEMHHEALQEAVPGDNVGF 2
           PTGLTTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 270 PTGLTTEVKSVEMHHEALQEALPGDNVGF 298


>dbj|BAC23049.1| Elongation factor 1-alpha [Solanum tuberosum]
          Length = 448

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/89 (93%), Positives = 89/89 (100%)
 Frame = -3

Query: 268 WYKGPTLLDSLDQISEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFG 89
           WYKGPTLLD+LDQI+EPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTFG
Sbjct: 210 WYKGPTLLDALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFG 269

Query: 88  PTGLTTEVKSVEMHHEALQEAVPGDNVGF 2
           PTGLTTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 270 PTGLTTEVKSVEMHHEALQEALPGDNVGF 298


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