BLASTX nr result

ID: Cimicifuga21_contig00004858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004858
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease ...    73   2e-10
ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]    73   2e-10
ref|NP_001117381.1| exonuclease 1 [Arabidopsis thaliana] gi|3321...    73   2e-10
ref|NP_174256.2| exonuclease 1 [Arabidopsis thaliana] gi|3321929...    73   2e-10
ref|NP_001077624.1| exonuclease 1 [Arabidopsis thaliana] gi|1662...    73   2e-10

>ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1-like [Cucumis
           sativus]
          Length = 685

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = -3

Query: 720 RDLKYRD-KVPNDYQSNFEKTLLTYKHQRVFDRNLGDTVHFTEISANNYMDFDFLGPPLE 544
           R L+Y    VP+ Y+ +F+K +LT++HQRV+D    D VH ++IS +   D DFLGP + 
Sbjct: 254 RHLRYSTVAVPHLYEESFKKAILTFQHQRVYDPITEDIVHLSQISDHIEDDLDFLGPSIP 313

Query: 543 KELARKIAEGEVDPVTRKP 487
           + +A+ IAEG++DP T  P
Sbjct: 314 QHIAKGIAEGDIDPCTNLP 332


>ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
          Length = 685

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = -3

Query: 720 RDLKYRD-KVPNDYQSNFEKTLLTYKHQRVFDRNLGDTVHFTEISANNYMDFDFLGPPLE 544
           R L+Y    VP+ Y+ +F+K +LT++HQRV+D    D VH ++IS +   D DFLGP + 
Sbjct: 254 RHLRYSTVAVPHLYEESFKKAILTFQHQRVYDPITEDIVHLSQISDHIEDDLDFLGPSIP 313

Query: 543 KELARKIAEGEVDPVTRKP 487
           + +A+ IAEG++DP T  P
Sbjct: 314 QHIAKGIAEGDIDPCTNLP 332


>ref|NP_001117381.1| exonuclease 1 [Arabidopsis thaliana] gi|332192992|gb|AEE31113.1|
           exonuclease 1 [Arabidopsis thaliana]
          Length = 581

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = -3

Query: 720 RDLKYRD-KVPNDYQSNFEKTLLTYKHQRVFDRNLGDTVHFTEISANNYMDFDFLGPPLE 544
           + LKY    VP  Y+ +F++ LLT+KHQRV+D N  D +H  +IS N   D DF+GP + 
Sbjct: 100 KHLKYSTVSVPPLYEESFKRALLTFKHQRVYDPNAEDIIHLCDISDNLGEDSDFVGPSMP 159

Query: 543 KELARKIAEGEVDPVTRKP 487
           +++A+ IA G++DP T+ P
Sbjct: 160 QDIAKGIALGQLDPFTQLP 178


>ref|NP_174256.2| exonuclease 1 [Arabidopsis thaliana] gi|332192990|gb|AEE31111.1|
           exonuclease 1 [Arabidopsis thaliana]
          Length = 665

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = -3

Query: 720 RDLKYRD-KVPNDYQSNFEKTLLTYKHQRVFDRNLGDTVHFTEISANNYMDFDFLGPPLE 544
           + LKY    VP  Y+ +F++ LLT+KHQRV+D N  D +H  +IS N   D DF+GP + 
Sbjct: 184 KHLKYSTVSVPPLYEESFKRALLTFKHQRVYDPNAEDIIHLCDISDNLGEDSDFVGPSMP 243

Query: 543 KELARKIAEGEVDPVTRKP 487
           +++A+ IA G++DP T+ P
Sbjct: 244 QDIAKGIALGQLDPFTQLP 262


>ref|NP_001077624.1| exonuclease 1 [Arabidopsis thaliana]
           gi|166232400|sp|Q8L6Z7.2|EXO1_ARATH RecName:
           Full=Exonuclease 1 gi|332192991|gb|AEE31112.1|
           exonuclease 1 [Arabidopsis thaliana]
          Length = 735

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = -3

Query: 720 RDLKYRD-KVPNDYQSNFEKTLLTYKHQRVFDRNLGDTVHFTEISANNYMDFDFLGPPLE 544
           + LKY    VP  Y+ +F++ LLT+KHQRV+D N  D +H  +IS N   D DF+GP + 
Sbjct: 254 KHLKYSTVSVPPLYEESFKRALLTFKHQRVYDPNAEDIIHLCDISDNLGEDSDFVGPSMP 313

Query: 543 KELARKIAEGEVDPVTRKP 487
           +++A+ IA G++DP T+ P
Sbjct: 314 QDIAKGIALGQLDPFTQLP 332


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