BLASTX nr result

ID: Cimicifuga21_contig00004805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004805
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317295.1| predicted protein [Populus trichocarpa] gi|2...   358   1e-96
ref|XP_002519709.1| conserved hypothetical protein [Ricinus comm...   357   2e-96
gb|AFK44138.1| unknown [Medicago truncatula]                          344   3e-92
gb|AFK34959.1| unknown [Lotus japonicus]                              342   1e-91
ref|XP_004162606.1| PREDICTED: uncharacterized protein ycf23-lik...   338   2e-90

>ref|XP_002317295.1| predicted protein [Populus trichocarpa] gi|222860360|gb|EEE97907.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  358 bits (920), Expect = 1e-96
 Identities = 197/292 (67%), Positives = 229/292 (78%)
 Frame = -3

Query: 1046 LLRHHHNPLLESVRFPSTHHFPTNRKTSFPCSTTKAVLSSTREFVLKDFHQGRALKIISG 867
            LL+ +HNPL  S   PS    P+  + S+   TT+A+LS+T+E VLKDFH+ RALKIISG
Sbjct: 17   LLKANHNPLQGSK--PSCS--PSKIRASY--LTTRALLSTTKETVLKDFHERRALKIISG 70

Query: 866  LQNFDRVNVADIVTAADTGGATHVDIACDPELVKLAXXXXXXXXXXXXVNPVAFLAAVDA 687
            LQNF++ NVA +VTAAD GGATHVDIACDPELVKLA            V P AFLAAV+A
Sbjct: 71   LQNFNKENVASVVTAADKGGATHVDIACDPELVKLAIILTSLPVCVSSVEPRAFLAAVEA 130

Query: 686  GAQMVEIGNYDSFYEKGIFFSPAEILKMTQETRKILPSIVLSVTVPHLLGLPDQVKLAEL 507
            GAQMVEIGNYDSFY++G+ FSP +IL +T+ET++ILPS+ LSVTVPH L LPDQVKLAEL
Sbjct: 131  GAQMVEIGNYDSFYDQGVVFSPEKILNLTKETKRILPSVTLSVTVPHTLSLPDQVKLAEL 190

Query: 506  LEQEGVDIIQTEGGRRSNPSKSGVLGLIEKATPSLESAYSISRAVKVPVLCSSGLSAVTA 327
            LEQEGVDIIQTEGG+ SNPSKSGVLGLIEKATPSL +AYSISRAVK+PV+CSSGLSAVTA
Sbjct: 191  LEQEGVDIIQTEGGKCSNPSKSGVLGLIEKATPSLAAAYSISRAVKIPVMCSSGLSAVTA 250

Query: 326  PMALXXXXXXXXXXXXVNKLNDVIAMIAEVRSIADSLGLPTGTRAAAEEFSV 171
            PMA+            +N+LNDV+AMIAEVRSIADSLG     R  +EE SV
Sbjct: 251  PMAITAGAAGVGVGSAINRLNDVVAMIAEVRSIADSLGSSADRRTKSEEKSV 302


>ref|XP_002519709.1| conserved hypothetical protein [Ricinus communis]
            gi|223541126|gb|EEF42682.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 361

 Score =  357 bits (917), Expect = 2e-96
 Identities = 195/289 (67%), Positives = 225/289 (77%)
 Frame = -3

Query: 1046 LLRHHHNPLLESVRFPSTHHFPTNRKTSFPCSTTKAVLSSTREFVLKDFHQGRALKIISG 867
            LLR +++P L +   PS   F   ++ S   +TT+A+LSST+E VLKDF + RALKIISG
Sbjct: 70   LLRPNNSPFLGNF-LPSKPCFSLKKRASL--ATTQALLSSTKETVLKDFQERRALKIISG 126

Query: 866  LQNFDRVNVADIVTAADTGGATHVDIACDPELVKLAXXXXXXXXXXXXVNPVAFLAAVDA 687
            LQNFD+ NVA +VTAAD GGATHVDIACDPELVKLA            V+P AFLAAV+A
Sbjct: 127  LQNFDKDNVASVVTAADKGGATHVDIACDPELVKLAISLTSLPVCVSSVDPAAFLAAVEA 186

Query: 686  GAQMVEIGNYDSFYEKGIFFSPAEILKMTQETRKILPSIVLSVTVPHLLGLPDQVKLAEL 507
            GAQMVEIGNYDSFY+KGI FSP +IL +T+ET++ILPS+ LSVTVPH L LPDQVKLAE 
Sbjct: 187  GAQMVEIGNYDSFYDKGIVFSPEQILSLTKETKRILPSVTLSVTVPHTLALPDQVKLAER 246

Query: 506  LEQEGVDIIQTEGGRRSNPSKSGVLGLIEKATPSLESAYSISRAVKVPVLCSSGLSAVTA 327
            LEQEG DIIQTEGG+ SNPSKSGVLGLIEKATP+L +AYSISRAVK+PV+CSSGLSAVTA
Sbjct: 247  LEQEGADIIQTEGGKCSNPSKSGVLGLIEKATPTLAAAYSISRAVKIPVMCSSGLSAVTA 306

Query: 326  PMALXXXXXXXXXXXXVNKLNDVIAMIAEVRSIADSLGLPTGTRAAAEE 180
            PMA+            VNKLNDV+AMIAEVRSIADS GL   +R A  E
Sbjct: 307  PMAIIAGASGVGVGSAVNKLNDVVAMIAEVRSIADSFGLSANSRLATPE 355


>gb|AFK44138.1| unknown [Medicago truncatula]
          Length = 307

 Score =  344 bits (882), Expect = 3e-92
 Identities = 187/274 (68%), Positives = 215/274 (78%)
 Frame = -3

Query: 1037 HHHNPLLESVRFPSTHHFPTNRKTSFPCSTTKAVLSSTREFVLKDFHQGRALKIISGLQN 858
            H++NPLL +   P        RKTSF   TT+A+LSST+E VLKDF +  ALKII+GLQN
Sbjct: 22   HNYNPLLGAASKPCL--LTLKRKTSF---TTRALLSSTKESVLKDFRERTALKIITGLQN 76

Query: 857  FDRVNVADIVTAADTGGATHVDIACDPELVKLAXXXXXXXXXXXXVNPVAFLAAVDAGAQ 678
            FD+ NVA +VTAA+ GGATHVDIACDPELVKLA            V+P  F AAV+AGA 
Sbjct: 77   FDKDNVASVVTAAEKGGATHVDIACDPELVKLAISLTSCPVCVSSVDPATFPAAVEAGAL 136

Query: 677  MVEIGNYDSFYEKGIFFSPAEILKMTQETRKILPSIVLSVTVPHLLGLPDQVKLAELLEQ 498
            MVEIGNYDSFYEKG+ F+P +IL +T+ETR+ILPS+VLSVTVPH L LPDQVKLAE LE 
Sbjct: 137  MVEIGNYDSFYEKGVIFTPEQILSLTKETRRILPSVVLSVTVPHTLSLPDQVKLAESLEL 196

Query: 497  EGVDIIQTEGGRRSNPSKSGVLGLIEKATPSLESAYSISRAVKVPVLCSSGLSAVTAPMA 318
            EGVDIIQTEGG+ SNP+KSGVLGLIEKATP+L +AYSISRAVK+PV+CSSGLSAVTAPMA
Sbjct: 197  EGVDIIQTEGGKCSNPTKSGVLGLIEKATPTLAAAYSISRAVKIPVMCSSGLSAVTAPMA 256

Query: 317  LXXXXXXXXXXXXVNKLNDVIAMIAEVRSIADSL 216
            +            VNKLNDV+AMIAEVRSIADSL
Sbjct: 257  ITAGASGVGVGSAVNKLNDVVAMIAEVRSIADSL 290


>gb|AFK34959.1| unknown [Lotus japonicus]
          Length = 305

 Score =  342 bits (877), Expect = 1e-91
 Identities = 187/292 (64%), Positives = 220/292 (75%)
 Frame = -3

Query: 1037 HHHNPLLESVRFPSTHHFPTNRKTSFPCSTTKAVLSSTREFVLKDFHQGRALKIISGLQN 858
            +++NPLL S   P     P  R+    C TT+A+LSST+E VLKDF + RALKIISGL N
Sbjct: 20   NNNNPLLGSTWRPCP---PLKRRA---CFTTRALLSSTKETVLKDFQERRALKIISGLHN 73

Query: 857  FDRVNVADIVTAADTGGATHVDIACDPELVKLAXXXXXXXXXXXXVNPVAFLAAVDAGAQ 678
            FD+ NVA +VTAAD GGATHVDIACDPELVKLA            V+P  F AAV+AGA 
Sbjct: 74   FDKDNVASVVTAADKGGATHVDIACDPELVKLAISLTSCPVCVSSVDPATFPAAVEAGAL 133

Query: 677  MVEIGNYDSFYEKGIFFSPAEILKMTQETRKILPSIVLSVTVPHLLGLPDQVKLAELLEQ 498
            MVEIGNYDSFYEKG+ F+P +IL +T+ETR++LPSI LSVTVPH L LPDQVKLAELLEQ
Sbjct: 134  MVEIGNYDSFYEKGVVFTPEQILILTKETRRLLPSIALSVTVPHTLSLPDQVKLAELLEQ 193

Query: 497  EGVDIIQTEGGRRSNPSKSGVLGLIEKATPSLESAYSISRAVKVPVLCSSGLSAVTAPMA 318
            E VDIIQTEGG+ SNP+KSG+LGLIEKATP+L +AYSISRAVK+PV+CSSGLSAVTAPMA
Sbjct: 194  ESVDIIQTEGGKCSNPTKSGILGLIEKATPTLAAAYSISRAVKIPVMCSSGLSAVTAPMA 253

Query: 317  LXXXXXXXXXXXXVNKLNDVIAMIAEVRSIADSLGLPTGTRAAAEEFSVRKR 162
            +            VN+LNDV+AMIAEVRSIA+SL  P     A  E  + ++
Sbjct: 254  ITAGAAGVGVGSAVNRLNDVVAMIAEVRSIANSLKTPFQICPATHEVEINRQ 305


>ref|XP_004162606.1| PREDICTED: uncharacterized protein ycf23-like [Cucumis sativus]
          Length = 352

 Score =  338 bits (866), Expect = 2e-90
 Identities = 186/284 (65%), Positives = 216/284 (76%)
 Frame = -3

Query: 1046 LLRHHHNPLLESVRFPSTHHFPTNRKTSFPCSTTKAVLSSTREFVLKDFHQGRALKIISG 867
            + + + NPLL  +   ST      R+   P STT+A+LS+ RE VLKDFH+ RALKIISG
Sbjct: 64   IFKLNQNPLLPHL--VSTPRLTLKRR---PASTTRALLSAHRELVLKDFHERRALKIISG 118

Query: 866  LQNFDRVNVADIVTAADTGGATHVDIACDPELVKLAXXXXXXXXXXXXVNPVAFLAAVDA 687
            LQN DR NVA +VTAAD GGATHVDIACD ELVKLA            V+P  FL AV+A
Sbjct: 119  LQNLDRENVASVVTAADKGGATHVDIACDAELVKLAISLTSLPVCVSSVDPAEFLPAVEA 178

Query: 686  GAQMVEIGNYDSFYEKGIFFSPAEILKMTQETRKILPSIVLSVTVPHLLGLPDQVKLAEL 507
            GA MVEIGNYDSFYE GI FS  +IL +T+ETR++LPS+ LSVTVPH LGLPDQVKLAEL
Sbjct: 179  GALMVEIGNYDSFYEAGIIFSADQILNLTKETRRLLPSVALSVTVPHTLGLPDQVKLAEL 238

Query: 506  LEQEGVDIIQTEGGRRSNPSKSGVLGLIEKATPSLESAYSISRAVKVPVLCSSGLSAVTA 327
            LEQEGVD+IQTEGG+ S+PSKSG+LGLIEKA P+L +AYSISRAVK+PV+CSSGLSAVTA
Sbjct: 239  LEQEGVDVIQTEGGKCSHPSKSGILGLIEKAAPTLAAAYSISRAVKIPVMCSSGLSAVTA 298

Query: 326  PMALXXXXXXXXXXXXVNKLNDVIAMIAEVRSIADSLGLPTGTR 195
            PMA+            VNKLN+V+AMIAEVRSIADSL  PT  +
Sbjct: 299  PMAITAGAAGVGVGSAVNKLNNVVAMIAEVRSIADSLA-PTAAQ 341


Top