BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004798
         (1752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...   476   e-132
ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [...   423   e-116
ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g...   420   e-115
emb|CBI17917.3| unnamed protein product [Vitis vinifera]              419   e-114
ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g...   419   e-114

>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
            vinifera]
          Length = 466

 Score =  476 bits (1226), Expect = e-132
 Identities = 258/425 (60%), Positives = 302/425 (71%), Gaps = 16/425 (3%)
 Frame = +2

Query: 245  ATENGSAVLPGSDPLSTLK-----------VEDSDTPAPETTVEATNPS-----VAAAEK 376
            A  NG+A  PGSDP + L             E    P+     E+T P        A+EK
Sbjct: 10   APVNGAAQSPGSDPKTELSETPLSASNAATAESEQAPSENLESESTAPPETEAPAPASEK 69

Query: 377  KWPGWPGDSVYRLVVPVLKVGSXXXXXXXXXXXMTEETRARIRILEGAIGTNDRIVLISG 556
            KWPGWPGD V+RL+VPVLKVGS           M EETRARIR+L+GA+GT+DRIVLISG
Sbjct: 70   KWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISG 129

Query: 557  KEEPEARISPAMNGVLRVFKRINGLXXXXXXXXXXXXXXXVACSIRLLVASSQAINLIGK 736
            +EEPEA +SPAM+ V+RVFKR+ GL                 CSIRLLVAS+QAINLIGK
Sbjct: 130  REEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGK 189

Query: 737  QGSLIKSIQESTGASVRVLSGDEVTFYATSDERVVDIQGESVKVLKALEAVVGHLRKFLV 916
            QGSLIKSIQESTGASVRVLSGDEV FYA +DER+V++QGE++KV KALEAVVGHLRKFLV
Sbjct: 190  QGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLV 249

Query: 917  DHSVIPLFEKVSTVTAPQDRAAETWTDKTQSLIHTASQTGINSDYSLPMKRDSLFLDRES 1096
            DHSV+PLFE+    T  QDR ++TW DK  SL+H  SQTG+ SDYSLP KR+SL+LDRE+
Sbjct: 250  DHSVLPLFERTYNATISQDRQSDTWADK--SLLHGTSQTGMGSDYSLPAKRESLYLDRET 307

Query: 1097 QLEPQIQHSGLSLYGQDPXXXXXXXXXXXXXXAPMITQMTQTMQIPLSYAEDXXXXXXXX 1276
            Q+E    HSGL +YGQ+               AP++TQ+ QTMQIPLSYAED        
Sbjct: 308  QME----HSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGAN 363

Query: 1277 XXXXRRTSGAILTVQESLGLPDEITVEIKGTSTQVQTAQQLIQDFIAGHKDPVASNYGKM 1456
                RRTSGAILTVQES GLPDEITVEIKGTS+QVQTAQQLIQ+FI+ HK+PV S+YGKM
Sbjct: 364  IAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKEPVPSSYGKM 423

Query: 1457 DTGLR 1471
            D+GLR
Sbjct: 424  DSGLR 428


>ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  423 bits (1087), Expect = e-116
 Identities = 236/392 (60%), Positives = 279/392 (71%), Gaps = 5/392 (1%)
 Frame = +2

Query: 311  SDTPAPE---TTVEATNPSVAAAEKKWPGWPGDSVYRLVVPVLKVGSXXXXXXXXXXXMT 481
            SD PA E   T  E   P  AAAEK+WPGWPG  V+RL+VPVLKVGS             
Sbjct: 13   SDNPAAEPSSTPAEDPTPDPAAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTC 72

Query: 482  EETRARIRILEGAIGTNDRIVLISGKEEPEARISPAMNGVLRVFKRINGLXXXXXXXXXX 661
            EET+ARIR+L+GA+GT+DRIVLISGKEEPEA +SPAMN V+RVFKR++G           
Sbjct: 73   EETKARIRVLDGAVGTSDRIVLISGKEEPEAPLSPAMNAVIRVFKRVSGFSEIDAENKAS 132

Query: 662  XXXXXVACSIRLLVASSQAINLIGKQGSLIKSIQESTGASVRVLSGDEVTFYATSDERVV 841
                   CS+RLLVAS+QAINLIGKQGSLIKSIQE+TGASVRVLSGDEV FYA +DER+V
Sbjct: 133  AVAF---CSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIV 189

Query: 842  DIQGESVKVLKALEAVVGHLRKFLVDHSVIPLFEKVSTVTAPQDRAAE-TWTDKTQSLIH 1018
            ++QGE++KVLKALEAVVGHLRKFLVD+SV+PLFEK    T  Q+  A+ TW DK    +H
Sbjct: 190  ELQGEAMKVLKALEAVVGHLRKFLVDNSVLPLFEKTYNATISQEHQADTTWVDKPS--LH 247

Query: 1019 TASQTGINSDYSLPMKRDSLFLDRESQLEPQIQHSGLSLYGQDPXXXXXXXXXXXXXXA- 1195
            +ASQ  I +D  L  KRDSLF DRESQL+  +  S +S+YGQD               A 
Sbjct: 248  SASQPSIVTDLPLSTKRDSLFADRESQLDSLLPPSTMSIYGQDSSLSGLRSSALSRPSAP 307

Query: 1196 PMITQMTQTMQIPLSYAEDXXXXXXXXXXXXRRTSGAILTVQESLGLPDEITVEIKGTST 1375
            P++T + QTMQIPLSYAED            R TSGAILTVQES  +PDEI VEIKGTS+
Sbjct: 308  PIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRCTSGAILTVQES-PVPDEIIVEIKGTSS 366

Query: 1376 QVQTAQQLIQDFIAGHKDPVASNYGKMDTGLR 1471
            QVQTAQQLIQ+ I+ HK+P+ASNY ++DTGLR
Sbjct: 367  QVQTAQQLIQEVISNHKEPLASNYSRLDTGLR 398


>ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 442

 Score =  420 bits (1079), Expect = e-115
 Identities = 234/407 (57%), Positives = 281/407 (69%)
 Frame = +2

Query: 251  ENGSAVLPGSDPLSTLKVEDSDTPAPETTVEATNPSVAAAEKKWPGWPGDSVYRLVVPVL 430
            +NG+A     +PL    V  +  P  ET   A   +    EK+WPGWPGD V+RL+VPV 
Sbjct: 8    QNGTA-----EPLLPDNVSAAQPPT-ETESNAAAAASTPPEKRWPGWPGDCVFRLIVPVG 61

Query: 431  KVGSXXXXXXXXXXXMTEETRARIRILEGAIGTNDRIVLISGKEEPEARISPAMNGVLRV 610
            KVGS           M EETR+RIR+L+  +GT DRIVL+SGKEEPEA +SPAM+ V+R+
Sbjct: 62   KVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALSPAMDAVVRI 121

Query: 611  FKRINGLXXXXXXXXXXXXXXXVACSIRLLVASSQAINLIGKQGSLIKSIQESTGASVRV 790
            FKR++GL                 CSIRLLVAS+QAINLIGKQGSLIKSIQE+T ASVRV
Sbjct: 122  FKRVSGLSETDAENKESAAGLAF-CSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRV 180

Query: 791  LSGDEVTFYATSDERVVDIQGESVKVLKALEAVVGHLRKFLVDHSVIPLFEKVSTVTAPQ 970
            LSGDEV  YAT DER+V+IQGE++KVLKALEAVVGHLRKFLVDHSV+PLFEK    +  Q
Sbjct: 181  LSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEKTYNASTSQ 240

Query: 971  DRAAETWTDKTQSLIHTASQTGINSDYSLPMKRDSLFLDRESQLEPQIQHSGLSLYGQDP 1150
            DR AETW+DK  SL+HT S+T I +D     KRDS+  DRESQL+  +  S +SLYGQD 
Sbjct: 241  DRQAETWSDK--SLLHTTSRTSIFADIPYSTKRDSVLADRESQLDSFLPSSTMSLYGQDS 298

Query: 1151 XXXXXXXXXXXXXXAPMITQMTQTMQIPLSYAEDXXXXXXXXXXXXRRTSGAILTVQESL 1330
                          AP++T + QTMQIPLSYAED            RRTSGAILTVQES 
Sbjct: 299  SLSGVRSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQES- 357

Query: 1331 GLPDEITVEIKGTSTQVQTAQQLIQDFIAGHKDPVASNYGKMDTGLR 1471
             +PDEI VEIKGTS++VQTAQQLIQD I+ HK+P+ S+YG++D G R
Sbjct: 358  RVPDEIVVEIKGTSSEVQTAQQLIQDVISSHKEPITSSYGRLDAGPR 404


>emb|CBI17917.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  419 bits (1077), Expect = e-114
 Identities = 221/332 (66%), Positives = 258/332 (77%)
 Frame = +2

Query: 476  MTEETRARIRILEGAIGTNDRIVLISGKEEPEARISPAMNGVLRVFKRINGLXXXXXXXX 655
            M EETRARIR+L+GA+GT+DRIVLISG+EEPEA +SPAM+ V+RVFKR+ GL        
Sbjct: 1    MCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGK 60

Query: 656  XXXXXXXVACSIRLLVASSQAINLIGKQGSLIKSIQESTGASVRVLSGDEVTFYATSDER 835
                     CSIRLLVAS+QAINLIGKQGSLIKSIQESTGASVRVLSGDEV FYA +DER
Sbjct: 61   AYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADER 120

Query: 836  VVDIQGESVKVLKALEAVVGHLRKFLVDHSVIPLFEKVSTVTAPQDRAAETWTDKTQSLI 1015
            +V++QGE++KV KALEAVVGHLRKFLVDHSV+PLFE+    T  QDR ++TW DK  SL+
Sbjct: 121  IVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADK--SLL 178

Query: 1016 HTASQTGINSDYSLPMKRDSLFLDRESQLEPQIQHSGLSLYGQDPXXXXXXXXXXXXXXA 1195
            H  SQTG+ SDYSLP KR+SL+LDRE+Q+E    HSGL +YGQ+               A
Sbjct: 179  HGTSQTGMGSDYSLPAKRESLYLDRETQME----HSGLPMYGQEHGLSGIRSSGLGRAGA 234

Query: 1196 PMITQMTQTMQIPLSYAEDXXXXXXXXXXXXRRTSGAILTVQESLGLPDEITVEIKGTST 1375
            P++TQ+ QTMQIPLSYAED            RRTSGAILTVQES GLPDEITVEIKGTS+
Sbjct: 235  PIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSS 294

Query: 1376 QVQTAQQLIQDFIAGHKDPVASNYGKMDTGLR 1471
            QVQTAQQLIQ+FI+ HK+PV S+YGKMD+GLR
Sbjct: 295  QVQTAQQLIQEFISNHKEPVPSSYGKMDSGLR 326


>ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 443

 Score =  419 bits (1076), Expect = e-114
 Identities = 233/405 (57%), Positives = 284/405 (70%), Gaps = 2/405 (0%)
 Frame = +2

Query: 251  ENGSAVLPGSDPLSTLKVEDSDTPAPETTVEATNPSVAAA--EKKWPGWPGDSVYRLVVP 424
            +NGSA  P       L V+++    P T  EA   + A+   EK+WPGWPGD V+RL+VP
Sbjct: 8    QNGSAENP-------LPVDNAPAAQPPTETEADAAATASTPPEKRWPGWPGDCVFRLIVP 60

Query: 425  VLKVGSXXXXXXXXXXXMTEETRARIRILEGAIGTNDRIVLISGKEEPEARISPAMNGVL 604
            V KVGS           M EETR+RIR+L+  +GT DRIVL+SGKE+PEA +SPAM+ V+
Sbjct: 61   VGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALSPAMDAVV 120

Query: 605  RVFKRINGLXXXXXXXXXXXXXXXVACSIRLLVASSQAINLIGKQGSLIKSIQESTGASV 784
            R+FKR++G                 + SIRLLVAS+QAINLIGKQGSLIKSIQE+T ASV
Sbjct: 121  RIFKRVSGFSETDAENQESAAGLAFS-SIRLLVASTQAINLIGKQGSLIKSIQENTSASV 179

Query: 785  RVLSGDEVTFYATSDERVVDIQGESVKVLKALEAVVGHLRKFLVDHSVIPLFEKVSTVTA 964
            RVLSGDEV FYAT++ER+V+IQGE++KVLKALEAVVGHLRKFLVDHSV+PLFEK      
Sbjct: 180  RVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEKTYNAPT 239

Query: 965  PQDRAAETWTDKTQSLIHTASQTGINSDYSLPMKRDSLFLDRESQLEPQIQHSGLSLYGQ 1144
             QDR AETW+DK  SL+HT+S+T I +D  L  KRDS+  DRESQL+  +  S +SLYGQ
Sbjct: 240  SQDRQAETWSDK--SLLHTSSRTSIFADIPLSTKRDSVLADRESQLDLFLPSSTMSLYGQ 297

Query: 1145 DPXXXXXXXXXXXXXXAPMITQMTQTMQIPLSYAEDXXXXXXXXXXXXRRTSGAILTVQE 1324
            D               AP++T + QTMQIPLSYAED            RRTSGAILTVQE
Sbjct: 298  DSSLSGVHSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQE 357

Query: 1325 SLGLPDEITVEIKGTSTQVQTAQQLIQDFIAGHKDPVASNYGKMD 1459
            S  +PDEI VEIKGTS++VQTAQQLIQD I+ HK+PV S+YG++D
Sbjct: 358  S-RVPDEIVVEIKGTSSEVQTAQQLIQDVISSHKEPVTSSYGRLD 401