BLASTX nr result

ID: Cimicifuga21_contig00004795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004795
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|2...   145   2e-32
gb|ABK92767.1| unknown [Populus trichocarpa] gi|118489754|gb|ABK...   144   3e-32
ref|XP_002285261.1| PREDICTED: transcription elongation factor 1...   143   5e-32
ref|XP_002300406.1| predicted protein [Populus trichocarpa] gi|2...   143   6e-32
ref|XP_002522506.1| Transcription elongation factor, putative [R...   141   2e-31

>ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|222859864|gb|EEE97411.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  145 bits (365), Expect = 2e-32
 Identities = 68/97 (70%), Positives = 75/97 (77%)
 Frame = +1

Query: 157 SEEKNLSSTMGXXXXXXXXXXXXXMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGI 336
           S + + +  MG             MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGI
Sbjct: 61  SADSDFNLQMGKRKSTAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGI 120

Query: 337 CQESFSMTIDALTEPIDVYSEWIDECERVNTHDDDAA 447
           CQESFSMTI ALTEPID+YSEWIDECERVN+ +DD A
Sbjct: 121 CQESFSMTITALTEPIDIYSEWIDECERVNSLEDDGA 157


>gb|ABK92767.1| unknown [Populus trichocarpa] gi|118489754|gb|ABK96677.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 88

 Score =  144 bits (363), Expect = 3e-32
 Identities = 65/73 (89%), Positives = 69/73 (94%)
 Frame = +1

Query: 229 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSMTIDALTEPIDVYSEWID 408
           MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGICQESFSMTI ALTEPID+YSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQESFSMTITALTEPIDIYSEWID 75

Query: 409 ECERVNTHDDDAA 447
           ECERVN+ +DD A
Sbjct: 76  ECERVNSLEDDGA 88


>ref|XP_002285261.1| PREDICTED: transcription elongation factor 1 homolog isoform 1
           [Vitis vinifera] gi|225461578|ref|XP_002285263.1|
           PREDICTED: transcription elongation factor 1 homolog
           isoform 2 [Vitis vinifera] gi|302142940|emb|CBI20235.3|
           unnamed protein product [Vitis vinifera]
          Length = 92

 Score =  143 bits (361), Expect = 5e-32
 Identities = 65/73 (89%), Positives = 70/73 (95%)
 Frame = +1

Query: 229 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSMTIDALTEPIDVYSEWID 408
           MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA C ICQESFSMT++AL+EPIDVYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCRICQESFSMTVNALSEPIDVYSEWID 75

Query: 409 ECERVNTHDDDAA 447
           ECERVNT D+DAA
Sbjct: 76  ECERVNTLDEDAA 88


>ref|XP_002300406.1| predicted protein [Populus trichocarpa] gi|222847664|gb|EEE85211.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  143 bits (360), Expect = 6e-32
 Identities = 64/73 (87%), Positives = 69/73 (94%)
 Frame = +1

Query: 229 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSMTIDALTEPIDVYSEWID 408
           MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGICQE+FSMTI ALTEPID+YSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQENFSMTITALTEPIDIYSEWID 75

Query: 409 ECERVNTHDDDAA 447
           ECERVN+ +DD A
Sbjct: 76  ECERVNSLEDDGA 88


>ref|XP_002522506.1| Transcription elongation factor, putative [Ricinus communis]
           gi|223538197|gb|EEF39806.1| Transcription elongation
           factor, putative [Ricinus communis]
          Length = 88

 Score =  141 bits (355), Expect = 2e-31
 Identities = 65/73 (89%), Positives = 66/73 (90%)
 Frame = +1

Query: 229 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSMTIDALTEPIDVYSEWID 408
           MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA C ICQESFS TI ALTEPIDVYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCAICQESFSTTITALTEPIDVYSEWID 75

Query: 409 ECERVNTHDDDAA 447
           ECERVN  DDD A
Sbjct: 76  ECERVNNVDDDGA 88


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