BLASTX nr result
ID: Cimicifuga21_contig00004795
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00004795 (921 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|2... 145 2e-32 gb|ABK92767.1| unknown [Populus trichocarpa] gi|118489754|gb|ABK... 144 3e-32 ref|XP_002285261.1| PREDICTED: transcription elongation factor 1... 143 5e-32 ref|XP_002300406.1| predicted protein [Populus trichocarpa] gi|2... 143 6e-32 ref|XP_002522506.1| Transcription elongation factor, putative [R... 141 2e-31 >ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|222859864|gb|EEE97411.1| predicted protein [Populus trichocarpa] Length = 157 Score = 145 bits (365), Expect = 2e-32 Identities = 68/97 (70%), Positives = 75/97 (77%) Frame = +1 Query: 157 SEEKNLSSTMGXXXXXXXXXXXXXMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGI 336 S + + + MG MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGI Sbjct: 61 SADSDFNLQMGKRKSTAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGI 120 Query: 337 CQESFSMTIDALTEPIDVYSEWIDECERVNTHDDDAA 447 CQESFSMTI ALTEPID+YSEWIDECERVN+ +DD A Sbjct: 121 CQESFSMTITALTEPIDIYSEWIDECERVNSLEDDGA 157 >gb|ABK92767.1| unknown [Populus trichocarpa] gi|118489754|gb|ABK96677.1| unknown [Populus trichocarpa x Populus deltoides] Length = 88 Score = 144 bits (363), Expect = 3e-32 Identities = 65/73 (89%), Positives = 69/73 (94%) Frame = +1 Query: 229 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSMTIDALTEPIDVYSEWID 408 MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGICQESFSMTI ALTEPID+YSEWID Sbjct: 16 MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQESFSMTITALTEPIDIYSEWID 75 Query: 409 ECERVNTHDDDAA 447 ECERVN+ +DD A Sbjct: 76 ECERVNSLEDDGA 88 >ref|XP_002285261.1| PREDICTED: transcription elongation factor 1 homolog isoform 1 [Vitis vinifera] gi|225461578|ref|XP_002285263.1| PREDICTED: transcription elongation factor 1 homolog isoform 2 [Vitis vinifera] gi|302142940|emb|CBI20235.3| unnamed protein product [Vitis vinifera] Length = 92 Score = 143 bits (361), Expect = 5e-32 Identities = 65/73 (89%), Positives = 70/73 (95%) Frame = +1 Query: 229 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSMTIDALTEPIDVYSEWID 408 MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA C ICQESFSMT++AL+EPIDVYSEWID Sbjct: 16 MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCRICQESFSMTVNALSEPIDVYSEWID 75 Query: 409 ECERVNTHDDDAA 447 ECERVNT D+DAA Sbjct: 76 ECERVNTLDEDAA 88 >ref|XP_002300406.1| predicted protein [Populus trichocarpa] gi|222847664|gb|EEE85211.1| predicted protein [Populus trichocarpa] Length = 88 Score = 143 bits (360), Expect = 6e-32 Identities = 64/73 (87%), Positives = 69/73 (94%) Frame = +1 Query: 229 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSMTIDALTEPIDVYSEWID 408 MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGICQE+FSMTI ALTEPID+YSEWID Sbjct: 16 MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQENFSMTITALTEPIDIYSEWID 75 Query: 409 ECERVNTHDDDAA 447 ECERVN+ +DD A Sbjct: 76 ECERVNSLEDDGA 88 >ref|XP_002522506.1| Transcription elongation factor, putative [Ricinus communis] gi|223538197|gb|EEF39806.1| Transcription elongation factor, putative [Ricinus communis] Length = 88 Score = 141 bits (355), Expect = 2e-31 Identities = 65/73 (89%), Positives = 66/73 (90%) Frame = +1 Query: 229 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSMTIDALTEPIDVYSEWID 408 MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA C ICQESFS TI ALTEPIDVYSEWID Sbjct: 16 MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCAICQESFSTTITALTEPIDVYSEWID 75 Query: 409 ECERVNTHDDDAA 447 ECERVN DDD A Sbjct: 76 ECERVNNVDDDGA 88