BLASTX nr result

ID: Cimicifuga21_contig00004761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004761
         (1634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [C...   691   0.0  
ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   690   0.0  
ref|XP_003549832.1| PREDICTED: probable pectate lyase 22 isoform...   682   0.0  
ref|XP_002322215.1| predicted protein [Populus trichocarpa] gi|2...   680   0.0  
gb|ADB90477.1| pectate lyase [Gossypium hirsutum]                     679   0.0  

>ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [Cucumis sativus]
          Length = 413

 Score =  691 bits (1783), Expect = 0.0
 Identities = 328/381 (86%), Positives = 347/381 (91%), Gaps = 2/381 (0%)
 Frame = +3

Query: 144  VEDPDLVAQEVVRQI-NST-RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 317
            V +P+LV QEV R I N+T RRNLGYLSCGTGNPIDDCWRCD NWEKNRQRLADC IGFG
Sbjct: 33   VSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFG 92

Query: 318  KQAIGGRDGRIYVVTDSGNDNPVTPKPGTLRYAVIQDEPLWIIFARDMVIQLKEELIMNS 497
            K AIGGRDG+IYVVTDSG+D+PV PKPGTLRYAVIQDEPLWIIFARDMVI+LKEELIMNS
Sbjct: 93   KNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNS 152

Query: 498  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLHIHDCKQGGNTDVRDSPRHFGFRTLSDG 677
            FKTIDGRGASVHIAGGPCITIQYVTNIIIHGL+IHDCKQGGNTDVRDSPRHFGFRT+SDG
Sbjct: 153  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDG 212

Query: 678  DGVSIFGGSHVWVDHCSLSSCRDGLIDAIHGSTAITISNNYLTHHDKVMLLGHSDSYTQD 857
            DGVSIFGGSHVWVDHCSLS+C DGLIDAIHGSTAITISNNY+THHDKVMLLGHSDSYTQD
Sbjct: 213  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQD 272

Query: 858  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 1037
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRF+A
Sbjct: 273  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVA 332

Query: 1038 PNDGDSKEITKHEDAPEEEWKHWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXRPS 1217
            PND  SKE+TK+EDAPE EWK+W+WRSEGDL LNGA+FT                  RPS
Sbjct: 333  PNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFTASGAGASSSYARASSLGARPS 392

Query: 1218 SVVGSITTTAGALNCRKGSRC 1280
            S+VG+ITT AGALNCRKGSRC
Sbjct: 393  SLVGTITTNAGALNCRKGSRC 413


>ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 22-like
            [Cucumis sativus]
          Length = 413

 Score =  690 bits (1780), Expect = 0.0
 Identities = 328/381 (86%), Positives = 346/381 (90%), Gaps = 2/381 (0%)
 Frame = +3

Query: 144  VEDPDLVAQEVVRQI-NST-RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 317
            V +P+LV QEV R I N+T RRNLGYLSCGTGNPIDDCWRCD NWEKNRQRLADC IGFG
Sbjct: 33   VSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFG 92

Query: 318  KQAIGGRDGRIYVVTDSGNDNPVTPKPGTLRYAVIQDEPLWIIFARDMVIQLKEELIMNS 497
            K AIGGRDG IYVVTDSG+D+PV PKPGTLRYAVIQDEPLWIIFARDMVI+LKEELIMNS
Sbjct: 93   KNAIGGRDGXIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNS 152

Query: 498  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLHIHDCKQGGNTDVRDSPRHFGFRTLSDG 677
            FKTIDGRGASVHIAGGPCITIQYVTNIIIHGL+IHDCKQGGNTDVRDSPRHFGFRT+SDG
Sbjct: 153  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDG 212

Query: 678  DGVSIFGGSHVWVDHCSLSSCRDGLIDAIHGSTAITISNNYLTHHDKVMLLGHSDSYTQD 857
            DGVSIFGGSHVWVDHCSLS+C DGLIDAIHGSTAITISNNY+THHDKVMLLGHSDSYTQD
Sbjct: 213  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQD 272

Query: 858  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 1037
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRF+A
Sbjct: 273  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVA 332

Query: 1038 PNDGDSKEITKHEDAPEEEWKHWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXRPS 1217
            PND  SKE+TK+EDAPE EWK+W+WRSEGDL LNGA+FT                  RPS
Sbjct: 333  PNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFTASGAGASSSYARASSLGARPS 392

Query: 1218 SVVGSITTTAGALNCRKGSRC 1280
            S+VG+ITT AGALNCRKGSRC
Sbjct: 393  SLVGTITTNAGALNCRKGSRC 413


>ref|XP_003549832.1| PREDICTED: probable pectate lyase 22 isoform 1 [Glycine max]
          Length = 406

 Score =  682 bits (1760), Expect = 0.0
 Identities = 320/381 (83%), Positives = 346/381 (90%), Gaps = 2/381 (0%)
 Frame = +3

Query: 144  VEDPDLVAQEVVRQINST--RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 317
            V+DP+ VAQEV R+IN++  RRNLGYLSC TGNPIDDCWRCDPNWEKNRQRLADCAIGFG
Sbjct: 26   VQDPEFVAQEVHRKINASVARRNLGYLSCATGNPIDDCWRCDPNWEKNRQRLADCAIGFG 85

Query: 318  KQAIGGRDGRIYVVTDSGNDNPVTPKPGTLRYAVIQDEPLWIIFARDMVIQLKEELIMNS 497
            K AIGG++G+IYVVTDSG+D+PVTPKPGTLRYAVIQDEPLWIIFARDMVI+LKEELIMNS
Sbjct: 86   KNAIGGKNGKIYVVTDSGDDDPVTPKPGTLRYAVIQDEPLWIIFARDMVIKLKEELIMNS 145

Query: 498  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLHIHDCKQGGNTDVRDSPRHFGFRTLSDG 677
            FKTIDGRGASVHIAGGPCITIQYVTN+IIHG++IHDCKQGGN  VRDSPRH+G+RT+SDG
Sbjct: 146  FKTIDGRGASVHIAGGPCITIQYVTNVIIHGINIHDCKQGGNAMVRDSPRHYGWRTISDG 205

Query: 678  DGVSIFGGSHVWVDHCSLSSCRDGLIDAIHGSTAITISNNYLTHHDKVMLLGHSDSYTQD 857
            DGVSIFGGSHVWVDHCSLS+C DGLIDAIHGST ITISNNY+THHDKVMLLGHSDSYTQD
Sbjct: 206  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTGITISNNYMTHHDKVMLLGHSDSYTQD 265

Query: 858  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 1037
            K+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+A
Sbjct: 266  KSMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVA 325

Query: 1038 PNDGDSKEITKHEDAPEEEWKHWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXRPS 1217
            P+D  SKE+TKHEDAPE EWK WNWRSEGDL +NGAFFT                  RPS
Sbjct: 326  PDDRFSKEVTKHEDAPESEWKGWNWRSEGDLLVNGAFFTASGAGASSSYARASSLSARPS 385

Query: 1218 SVVGSITTTAGALNCRKGSRC 1280
            S+VGSITT AGAL+CRKGSRC
Sbjct: 386  SLVGSITTGAGALSCRKGSRC 406


>ref|XP_002322215.1| predicted protein [Populus trichocarpa] gi|222869211|gb|EEF06342.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  680 bits (1755), Expect = 0.0
 Identities = 317/379 (83%), Positives = 341/379 (89%)
 Frame = +3

Query: 144  VEDPDLVAQEVVRQINSTRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKQ 323
            V+DP+LV QEV R IN++RR LGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGK 
Sbjct: 25   VQDPELVVQEVHRAINASRRKLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKN 84

Query: 324  AIGGRDGRIYVVTDSGNDNPVTPKPGTLRYAVIQDEPLWIIFARDMVIQLKEELIMNSFK 503
            AIGGRDG+IYVVTDSGND+PV P+PGTLR+AVIQ+EPLWIIFARDM IQLKEELIMNSFK
Sbjct: 85   AIGGRDGKIYVVTDSGNDDPVNPRPGTLRHAVIQEEPLWIIFARDMTIQLKEELIMNSFK 144

Query: 504  TIDGRGASVHIAGGPCITIQYVTNIIIHGLHIHDCKQGGNTDVRDSPRHFGFRTLSDGDG 683
            TIDGRGASVHIAGGPCITIQYVTNIIIHGLHIHDCKQGGN  VRDSP+HFG+RT+SDGDG
Sbjct: 145  TIDGRGASVHIAGGPCITIQYVTNIIIHGLHIHDCKQGGNAMVRDSPKHFGWRTVSDGDG 204

Query: 684  VSIFGGSHVWVDHCSLSSCRDGLIDAIHGSTAITISNNYLTHHDKVMLLGHSDSYTQDKN 863
            VSIFGG+HVWVDH SLS+C DGL+DAIHGS+AITISNNY+THHDKVMLLGHSDSYTQDKN
Sbjct: 205  VSIFGGTHVWVDHNSLSNCNDGLVDAIHGSSAITISNNYMTHHDKVMLLGHSDSYTQDKN 264

Query: 864  MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPN 1043
            MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+AP+
Sbjct: 265  MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVAPD 324

Query: 1044 DGDSKEITKHEDAPEEEWKHWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXRPSSV 1223
               SKE+TKHEDAPE EWKHWNWRSEGDL +NGAFFT                  RPSS+
Sbjct: 325  IRFSKEVTKHEDAPESEWKHWNWRSEGDLLMNGAFFTASGAGASSSYARASSLGARPSSL 384

Query: 1224 VGSITTTAGALNCRKGSRC 1280
            VG+IT  AGAL CRKG+RC
Sbjct: 385  VGTITVGAGALGCRKGARC 403


>gb|ADB90477.1| pectate lyase [Gossypium hirsutum]
          Length = 411

 Score =  679 bits (1752), Expect = 0.0
 Identities = 317/379 (83%), Positives = 341/379 (89%)
 Frame = +3

Query: 144  VEDPDLVAQEVVRQINSTRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKQ 323
            V+DP+LV Q+V R IN++RRNLGYLSCGTGNPIDDCWRCDPNWE NRQ+LADCAIGFGK 
Sbjct: 33   VQDPELVVQDVHRAINASRRNLGYLSCGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKN 92

Query: 324  AIGGRDGRIYVVTDSGNDNPVTPKPGTLRYAVIQDEPLWIIFARDMVIQLKEELIMNSFK 503
            AIGGRDG+IYVVTDSG+D+PV PKPGTLR+AVIQDEPLWIIFARDM IQLKEELIMNSFK
Sbjct: 93   AIGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFK 152

Query: 504  TIDGRGASVHIAGGPCITIQYVTNIIIHGLHIHDCKQGGNTDVRDSPRHFGFRTLSDGDG 683
            TIDGRGASVHIAGGPCIT+QYVTNIIIHGL+IHDCKQGGN  VRDSPRH+G+RT+SDGDG
Sbjct: 153  TIDGRGASVHIAGGPCITVQYVTNIIIHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDG 212

Query: 684  VSIFGGSHVWVDHCSLSSCRDGLIDAIHGSTAITISNNYLTHHDKVMLLGHSDSYTQDKN 863
            VSIFGGSHVWVDH SLS+C+DGLIDAIHGSTAITISNNY+THHDKVMLLGHSDSYTQDKN
Sbjct: 213  VSIFGGSHVWVDHNSLSNCKDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKN 272

Query: 864  MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPN 1043
            MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF APN
Sbjct: 273  MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPN 332

Query: 1044 DGDSKEITKHEDAPEEEWKHWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXRPSSV 1223
            +  SKE+TKHEDAPE EWK WNWRSEGDL +NGAFF                   RPSS+
Sbjct: 333  NRFSKEVTKHEDAPESEWKSWNWRSEGDLMVNGAFFISSGAGASSSYAKASSLGARPSSL 392

Query: 1224 VGSITTTAGALNCRKGSRC 1280
            V +ITT AGALNC+KGSRC
Sbjct: 393  VATITTNAGALNCKKGSRC 411


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