BLASTX nr result

ID: Cimicifuga21_contig00004753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004753
         (1678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273924.1| PREDICTED: TBC1 domain family member 22B [Vi...   739   0.0  
ref|XP_002310419.1| predicted protein [Populus trichocarpa] gi|2...   720   0.0  
ref|XP_002530302.1| conserved hypothetical protein [Ricinus comm...   705   0.0  
ref|XP_004152140.1| PREDICTED: GTPase-activating protein GYP1-li...   690   0.0  
ref|XP_003546791.1| PREDICTED: GTPase-activating protein GYP1-li...   679   0.0  

>ref|XP_002273924.1| PREDICTED: TBC1 domain family member 22B [Vitis vinifera]
            gi|296084248|emb|CBI24636.3| unnamed protein product
            [Vitis vinifera]
          Length = 448

 Score =  739 bits (1908), Expect = 0.0
 Identities = 357/435 (82%), Positives = 396/435 (91%)
 Frame = +2

Query: 131  NLDSRFNQTLRNVQGLLQGRSFPGKVLLTRRSETSADSYLSRHPPEIERSYSENDIEPSE 310
            +LDSRFNQTLRNVQ LL+GRSFPGKVLLTRRS+    S +    P+ ERS+S+ND  PS+
Sbjct: 14   SLDSRFNQTLRNVQELLKGRSFPGKVLLTRRSDPLDSSSVQERSPDDERSFSDNDTGPSD 73

Query: 311  RMDRSSEGETQYTSKTDNNATSNKLKPSISNIENTSSETQKTVMGARATDSARVMKFTKE 490
            R+D+S E E + T K +N AT+NKLK S  N ENT  +  K+ MGARATDSARVMKFTKE
Sbjct: 74   RIDKSVEEEDEGTGKPNNTATANKLKSSKPNTENTPKDVPKSTMGARATDSARVMKFTKE 133

Query: 491  LSGPTLRLETLRELAWSGVPSYLRPTIWRLLLGYAPPNSDRREGVLRRKRIEYLDCVAQY 670
            LSGPT+ LETLREL+WSG+P Y+RPTIWRLLLGYAPPNSDRREGVL+RKR+EYLDCV+QY
Sbjct: 134  LSGPTVILETLRELSWSGIPPYMRPTIWRLLLGYAPPNSDRREGVLKRKRLEYLDCVSQY 193

Query: 671  YDIPDTERSDDEITMLRQIAVDCPRTVPDVTFFQQLEVQKSLERILYTWAIRHPASGYVQ 850
            YDIPDTERSDDEI MLRQIAVDCPRTVPDV+FFQ+ +VQKSLERILYTWAIRHPASGYVQ
Sbjct: 194  YDIPDTERSDDEINMLRQIAVDCPRTVPDVSFFQEEQVQKSLERILYTWAIRHPASGYVQ 253

Query: 851  GINDLVTPFLIVFLSEHLEGSMEKWSILDLSKQKISDMEADCYWCLSQLLDGMQDHYTFA 1030
            GINDLVTPFL+VFLSE+LEGSM+ WSI++LS +KIS++EADCYWCLS+LLDGMQDHYTFA
Sbjct: 254  GINDLVTPFLVVFLSEYLEGSMDNWSIINLSPEKISNVEADCYWCLSKLLDGMQDHYTFA 313

Query: 1031 QPGIQRLVFKLKELVRRIDEPVSRHMDEQGLDFLQFAFRWFNCLLIREIPFHLVARLWDT 1210
            QPGIQRLVFKLKELVRRIDEPVSRHM+EQGL+FLQFAFRWFNCLLIREIPF+LV RLWDT
Sbjct: 314  QPGIQRLVFKLKELVRRIDEPVSRHMEEQGLEFLQFAFRWFNCLLIREIPFNLVTRLWDT 373

Query: 1211 YLAEGDALPEFLVYIFASFLLTWSDELQKLDFQEMVMFLQRLPTQNWTHQELEMVLSRAY 1390
            YLAEGDALP+FLVYIFASFLLTWSD LQKLDFQE+VMFLQ LPT NWTHQELEMVLSRAY
Sbjct: 374  YLAEGDALPDFLVYIFASFLLTWSDTLQKLDFQELVMFLQHLPTHNWTHQELEMVLSRAY 433

Query: 1391 MWHTMFNSSPSHLAS 1435
            MWHTMFNSSPSHLAS
Sbjct: 434  MWHTMFNSSPSHLAS 448


>ref|XP_002310419.1| predicted protein [Populus trichocarpa] gi|222853322|gb|EEE90869.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  720 bits (1858), Expect = 0.0
 Identities = 355/436 (81%), Positives = 388/436 (88%), Gaps = 1/436 (0%)
 Frame = +2

Query: 131  NLDSRFNQTLRNVQGLLQGRSFPGKVLLTRRSETSADSYLSRHPPEIERSYSENDIEPSE 310
            +LDSR NQTL+NVQGLL+GRS PGKVLLTRR++   D  L        RS+SEND   S+
Sbjct: 9    SLDSRINQTLKNVQGLLKGRSIPGKVLLTRRADPPEDPSL--RSSTFGRSFSENDAGTSD 66

Query: 311  RMDRSSEGETQYTSKT-DNNATSNKLKPSISNIENTSSETQKTVMGARATDSARVMKFTK 487
            +MD S E E Q TSK  +NN T+NKLKP+ SN+E TS E QK+VMGARATDSARVMKFTK
Sbjct: 67   QMDMSKEAEAQGTSKQLNNNMTTNKLKPTNSNVEITSKEVQKSVMGARATDSARVMKFTK 126

Query: 488  ELSGPTLRLETLRELAWSGVPSYLRPTIWRLLLGYAPPNSDRREGVLRRKRIEYLDCVAQ 667
            ELSG T+ LE LRELAWSGVP Y+RP IWRLLLGYA PNSDRREGVLRRKR+EYLDCVAQ
Sbjct: 127  ELSGSTVTLEKLRELAWSGVPPYMRPNIWRLLLGYASPNSDRREGVLRRKRLEYLDCVAQ 186

Query: 668  YYDIPDTERSDDEITMLRQIAVDCPRTVPDVTFFQQLEVQKSLERILYTWAIRHPASGYV 847
            +YDIPDTERSDDEI MLRQI+VDCPRTVPDV FFQQ +VQKSLERILYTWAIRHPASGYV
Sbjct: 187  FYDIPDTERSDDEINMLRQISVDCPRTVPDVIFFQQEQVQKSLERILYTWAIRHPASGYV 246

Query: 848  QGINDLVTPFLIVFLSEHLEGSMEKWSILDLSKQKISDMEADCYWCLSQLLDGMQDHYTF 1027
            QGINDL TPFL+VFLSEHLEG + KWSI DLS  KIS++EADCYWCLS+LLDGMQDHYTF
Sbjct: 247  QGINDLATPFLVVFLSEHLEGDIHKWSISDLSPDKISNVEADCYWCLSKLLDGMQDHYTF 306

Query: 1028 AQPGIQRLVFKLKELVRRIDEPVSRHMDEQGLDFLQFAFRWFNCLLIREIPFHLVARLWD 1207
            AQPGIQRLVFKLKELV RIDEPVSRHM+EQGL+FLQFAFRWFNCLLIREIPF+LV RLWD
Sbjct: 307  AQPGIQRLVFKLKELVNRIDEPVSRHMEEQGLEFLQFAFRWFNCLLIREIPFNLVTRLWD 366

Query: 1208 TYLAEGDALPEFLVYIFASFLLTWSDELQKLDFQEMVMFLQRLPTQNWTHQELEMVLSRA 1387
            TYLAEGDALP+FLVYIFASFLLTWS+ELQKLDFQE+VMFLQ LPTQNWTHQELEMVLSRA
Sbjct: 367  TYLAEGDALPDFLVYIFASFLLTWSEELQKLDFQELVMFLQHLPTQNWTHQELEMVLSRA 426

Query: 1388 YMWHTMFNSSPSHLAS 1435
            +MWH+MFN+SPSHLAS
Sbjct: 427  FMWHSMFNNSPSHLAS 442


>ref|XP_002530302.1| conserved hypothetical protein [Ricinus communis]
            gi|223530158|gb|EEF32069.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 430

 Score =  705 bits (1820), Expect = 0.0
 Identities = 341/421 (80%), Positives = 375/421 (89%)
 Frame = +2

Query: 173  GLLQGRSFPGKVLLTRRSETSADSYLSRHPPEIERSYSENDIEPSERMDRSSEGETQYTS 352
            GLL+GRS PGKVLLTR+++   D  L    P   RS+SEND   S+RMD S E E + T 
Sbjct: 10   GLLKGRSIPGKVLLTRKTDPPEDPSLQERSPSFGRSFSENDAGTSDRMDMSREAEARSTG 69

Query: 353  KTDNNATSNKLKPSISNIENTSSETQKTVMGARATDSARVMKFTKELSGPTLRLETLREL 532
            K + +A +NKLKPS+SNIE    ++QK+ MGARATDSAR+MKFTKELSG T+ LE LREL
Sbjct: 70   KLNISAATNKLKPSMSNIETKPKDSQKSPMGARATDSARIMKFTKELSGTTVILERLREL 129

Query: 533  AWSGVPSYLRPTIWRLLLGYAPPNSDRREGVLRRKRIEYLDCVAQYYDIPDTERSDDEIT 712
            AWSGVP Y+RP +WRLLLGYAPPNSDRREGVLRRKR+EYLDCV Q+YDIPDTERSDDEI 
Sbjct: 130  AWSGVPPYMRPNVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVDQFYDIPDTERSDDEIN 189

Query: 713  MLRQIAVDCPRTVPDVTFFQQLEVQKSLERILYTWAIRHPASGYVQGINDLVTPFLIVFL 892
            MLRQI+VDCPRTVPDVTFFQQ +VQKSLERILYTWAIRHPASGYVQGINDL TPFL+VFL
Sbjct: 190  MLRQISVDCPRTVPDVTFFQQAQVQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFL 249

Query: 893  SEHLEGSMEKWSILDLSKQKISDMEADCYWCLSQLLDGMQDHYTFAQPGIQRLVFKLKEL 1072
            SEHLEG +E WSI DLS+ KIS++EADCY CLS+LLDGMQDHYTFAQPGIQRLVFKLKEL
Sbjct: 250  SEHLEGDIENWSISDLSQDKISNIEADCYGCLSKLLDGMQDHYTFAQPGIQRLVFKLKEL 309

Query: 1073 VRRIDEPVSRHMDEQGLDFLQFAFRWFNCLLIREIPFHLVARLWDTYLAEGDALPEFLVY 1252
            VRRIDEPVSRHM+EQGL+FLQFAFRWFNCLLIREIPFHLV RLWDTYLAEGDALP+FLVY
Sbjct: 310  VRRIDEPVSRHMEEQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVY 369

Query: 1253 IFASFLLTWSDELQKLDFQEMVMFLQRLPTQNWTHQELEMVLSRAYMWHTMFNSSPSHLA 1432
            I+ASFLLTWSD+LQKLDFQEMVMFLQ LPTQNWTHQELEMVLSRAYMWH+MFNSSPSHLA
Sbjct: 370  IYASFLLTWSDKLQKLDFQEMVMFLQHLPTQNWTHQELEMVLSRAYMWHSMFNSSPSHLA 429

Query: 1433 S 1435
            S
Sbjct: 430  S 430


>ref|XP_004152140.1| PREDICTED: GTPase-activating protein GYP1-like [Cucumis sativus]
            gi|449484756|ref|XP_004156971.1| PREDICTED:
            GTPase-activating protein GYP1-like [Cucumis sativus]
          Length = 456

 Score =  690 bits (1781), Expect = 0.0
 Identities = 337/434 (77%), Positives = 377/434 (86%)
 Frame = +2

Query: 134  LDSRFNQTLRNVQGLLQGRSFPGKVLLTRRSETSADSYLSRHPPEIERSYSENDIEPSER 313
            LDSRF+QTLRNVQGLL+GRS PGKVLLTRRS+  + S +S  P    RS+S+ D   S R
Sbjct: 26   LDSRFSQTLRNVQGLLKGRSIPGKVLLTRRSDVLSPSSVSDKPLNYTRSFSDIDTGTSNR 85

Query: 314  MDRSSEGETQYTSKTDNNATSNKLKPSISNIENTSSETQKTVMGARATDSARVMKFTKEL 493
            + +S E + Q  +   NN   NK K S SN E+ + E +K +MGARATDSARVMKFTK L
Sbjct: 86   IVQSEEEDVQIIN---NNTILNKSKSSTSNTEDLTKEVEKPIMGARATDSARVMKFTKLL 142

Query: 494  SGPTLRLETLRELAWSGVPSYLRPTIWRLLLGYAPPNSDRREGVLRRKRIEYLDCVAQYY 673
            SG T+  + LRELAWSG+P Y+RP IWRLLLGYAPPNSDR+EGVLRRKR+EYLD VAQ+Y
Sbjct: 143  SGTTIISDKLRELAWSGIPPYMRPNIWRLLLGYAPPNSDRKEGVLRRKRLEYLDSVAQFY 202

Query: 674  DIPDTERSDDEITMLRQIAVDCPRTVPDVTFFQQLEVQKSLERILYTWAIRHPASGYVQG 853
            DIPDTERSDDEI MLRQIAVDCPRTVPDV FFQQ +VQKSLERILYTWAIRHPASGYVQG
Sbjct: 203  DIPDTERSDDEINMLRQIAVDCPRTVPDVAFFQQAQVQKSLERILYTWAIRHPASGYVQG 262

Query: 854  INDLVTPFLIVFLSEHLEGSMEKWSILDLSKQKISDMEADCYWCLSQLLDGMQDHYTFAQ 1033
            INDL TPFL+VFLSE+LEG +EKWSI DLS   I+++EADCYWCLS+LLDGMQDHYTFAQ
Sbjct: 263  INDLATPFLVVFLSEYLEGGVEKWSISDLSPDNITNIEADCYWCLSKLLDGMQDHYTFAQ 322

Query: 1034 PGIQRLVFKLKELVRRIDEPVSRHMDEQGLDFLQFAFRWFNCLLIREIPFHLVARLWDTY 1213
            PGIQRLVFKLKELVRRIDEPVSRHM+EQGL+FLQFAFRWFNCLLIREIPFHLV RLWDTY
Sbjct: 323  PGIQRLVFKLKELVRRIDEPVSRHMEEQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTY 382

Query: 1214 LAEGDALPEFLVYIFASFLLTWSDELQKLDFQEMVMFLQRLPTQNWTHQELEMVLSRAYM 1393
            LAEGD+LP+FLVYIFASFLLTWS++LQKLDFQE+VMFLQ +PTQNWTHQELEMVLSRAYM
Sbjct: 383  LAEGDSLPDFLVYIFASFLLTWSEQLQKLDFQELVMFLQHVPTQNWTHQELEMVLSRAYM 442

Query: 1394 WHTMFNSSPSHLAS 1435
            WH+MFN+SP HL S
Sbjct: 443  WHSMFNNSPRHLVS 456


>ref|XP_003546791.1| PREDICTED: GTPase-activating protein GYP1-like [Glycine max]
          Length = 455

 Score =  679 bits (1751), Expect = 0.0
 Identities = 333/452 (73%), Positives = 379/452 (83%)
 Frame = +2

Query: 80   NNTNXXXXXXXXXXXXXNLDSRFNQTLRNVQGLLQGRSFPGKVLLTRRSETSADSYLSRH 259
            NN N              LDSRFNQTLRNVQGLL+GR+ PGK+LL++R E+    Y S  
Sbjct: 6    NNNNNNSAEHSKDTTVGILDSRFNQTLRNVQGLLKGRNIPGKILLSQRVESP--DYTSLS 63

Query: 260  PPEIERSYSENDIEPSERMDRSSEGETQYTSKTDNNATSNKLKPSISNIENTSSETQKTV 439
             P   RS S ++   S++   + E E   TSK       NKLK S SN+E++S E +K+ 
Sbjct: 64   SPTYIRSSSYSETGTSDQTSETVEEEVHSTSKPFGIPNDNKLKISASNVESSSEEVRKSS 123

Query: 440  MGARATDSARVMKFTKELSGPTLRLETLRELAWSGVPSYLRPTIWRLLLGYAPPNSDRRE 619
            MGARATDSARVMKFTK LS   ++LE LRE +WSGVP Y+RPT+WRLLLGYAPPNSDRRE
Sbjct: 124  MGARATDSARVMKFTKVLSETMVKLEKLREFSWSGVPDYMRPTVWRLLLGYAPPNSDRRE 183

Query: 620  GVLRRKRIEYLDCVAQYYDIPDTERSDDEITMLRQIAVDCPRTVPDVTFFQQLEVQKSLE 799
            GVL+RKR+EYLDCV+QYYDIPDTERSDDEI MLRQIAVDCPRTVP+V+FFQQ +VQKSLE
Sbjct: 184  GVLKRKRLEYLDCVSQYYDIPDTERSDDEINMLRQIAVDCPRTVPEVSFFQQQQVQKSLE 243

Query: 800  RILYTWAIRHPASGYVQGINDLVTPFLIVFLSEHLEGSMEKWSILDLSKQKISDMEADCY 979
            RILYTWAIRHPASGYVQGINDLVTPFL+VFLSE+LEG ++ WS+ DLS  +IS++EADCY
Sbjct: 244  RILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGGIDNWSMSDLSSDEISNIEADCY 303

Query: 980  WCLSQLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHMDEQGLDFLQFAFRWFNC 1159
            WCLS+LLDGMQDHYTFAQPGIQRLVFKLKELVRRID+P S HM+EQGL+FLQFAFRWFNC
Sbjct: 304  WCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPASNHMEEQGLEFLQFAFRWFNC 363

Query: 1160 LLIREIPFHLVARLWDTYLAEGDALPEFLVYIFASFLLTWSDELQKLDFQEMVMFLQRLP 1339
            LLIREIPFHLV RLWDTYLAEGDALP+FLVYI ASFLLTWSD+LQKLDFQEMVMFLQ LP
Sbjct: 364  LLIREIPFHLVTRLWDTYLAEGDALPDFLVYISASFLLTWSDKLQKLDFQEMVMFLQHLP 423

Query: 1340 TQNWTHQELEMVLSRAYMWHTMFNSSPSHLAS 1435
            T+NWT QELEMVLSRA+MWH+MFN+SPSHLA+
Sbjct: 424  TKNWTQQELEMVLSRAFMWHSMFNNSPSHLAN 455


Top