BLASTX nr result

ID: Cimicifuga21_contig00004739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004739
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511928.1| conserved hypothetical protein [Ricinus comm...   141   2e-31
ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258...   141   2e-31
ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lyc...   141   2e-31
ref|XP_002509874.1| conserved hypothetical protein [Ricinus comm...   137   4e-30
ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799...   135   2e-29

>ref|XP_002511928.1| conserved hypothetical protein [Ricinus communis]
           gi|223549108|gb|EEF50597.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score =  141 bits (355), Expect = 2e-31
 Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%)
 Frame = +1

Query: 97  QVKPLTPYPTRSYEDGDFSAIFQTKKLKRQRRAAKCVGCCMAGXXXXXXXXXXXXXXXXX 276
           QV+PL P   R+  D D  A    KK +R RR  KC GC  A                  
Sbjct: 6   QVRPLAPSADRTSSD-DEEATIHLKKTRR-RRCIKCCGCITASLLVPAIVIVILIFTVFR 63

Query: 277 XSGPEIKMNRFTIPPLSI--NNIP---ATINILVDVSVKNPNVASFKYNNSTTSIYYYGK 441
              P IK+N   I  + +  N IP     I+++ D+SVKNPN+ SFKY+N+T+++YY+G 
Sbjct: 64  VKDPTIKLNNVIITHMELINNTIPKPGTNISLVADLSVKNPNIVSFKYDNTTSALYYHGV 123

Query: 442 TVGEAHTPAGTAKARRTQHMNLSMEVTTAQILAEPNFADVIRSGILTMDSYTRLDGRXXX 621
            VGEA  P G +KARRT  +N ++++   ++++ PN      +G+LT+DSYT+L G+   
Sbjct: 124 LVGEARGPPGHSKARRTMRLNATIDLVADKLISNPNLNTDAATGLLTVDSYTKLPGK-VK 182

Query: 622 XXXXXXXXXXXMNCTIKANVTSQEIVEQKCKKKVSI 729
                      MNC++  N++SQ I  QKCK KV +
Sbjct: 183 ILIIKKHVTIKMNCSLTVNISSQAIQSQKCKNKVDL 218


>ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera]
           gi|147832282|emb|CAN73280.1| hypothetical protein
           VITISV_040609 [Vitis vinifera]
           gi|297745338|emb|CBI40418.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  141 bits (355), Expect = 2e-31
 Identities = 79/217 (36%), Positives = 114/217 (52%), Gaps = 6/217 (2%)
 Frame = +1

Query: 97  QVKPLTPYPTRSYEDGDFSAIFQTKKLKRQRRAAKCVGCCMAGXXXXXXXXXXXXXXXXX 276
           QV+PL P   R   + D   +       R+RR  KC GC  A                  
Sbjct: 6   QVRPLAPASHRLSSEDD--KVTNHLSRLRRRRCIKCWGCIAATILIQAAVVIILVFTVFR 63

Query: 277 XSGPEIKMNRFTIPPLSINNIPAT------INILVDVSVKNPNVASFKYNNSTTSIYYYG 438
              P IK+N FT+  L + N   T      +++  DVSVKNPN ASF+Y N+TT+++Y G
Sbjct: 64  VKDPVIKLNGFTVDKLELINGTTTPGPGVNMSLTADVSVKNPNFASFRYKNTTTTLFYSG 123

Query: 439 KTVGEAHTPAGTAKARRTQHMNLSMEVTTAQILAEPNFADVIRSGILTMDSYTRLDGRXX 618
             +GEA  P G AKARRT  MN+++E+    +++ P+    I SGIL M++Y+R+ GR  
Sbjct: 124 TVIGEARGPPGQAKARRTMKMNVTIEIILDSLMSNPSLLTDISSGILPMNTYSRVPGRVK 183

Query: 619 XXXXXXXXXXXXMNCTIKANVTSQEIVEQKCKKKVSI 729
                       MNC++  N+TS+ I EQKCK+ V++
Sbjct: 184 MLKIIKKHVVVKMNCSVTVNITSRSIQEQKCKRDVNL 220


>ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lycopersicum]
           gi|94549041|gb|ABF39005.1| plant cell wall protein
           SlTFR88 [Solanum lycopersicum]
          Length = 226

 Score =  141 bits (355), Expect = 2e-31
 Identities = 82/221 (37%), Positives = 108/221 (48%), Gaps = 10/221 (4%)
 Frame = +1

Query: 97  QVKPLTPYPTRSYEDGDFSAIFQTKKLKRQRRAAKCVGCCMAGXXXXXXXXXXXXXXXXX 276
           QV+PL P   R +   D       KK   QRR  K   C                     
Sbjct: 6   QVRPLAPASDRPHSSDDDDTTLNIKKRFHQRRCFKYCACVSTFVFLVAIIIIILIFTVFK 65

Query: 277 XSGPEIKMNRFTIPPLSINNIPATI----------NILVDVSVKNPNVASFKYNNSTTSI 426
              P I MN  TI  L + N   T+           I  DVSVKNPN +SFKY+N+TT+I
Sbjct: 66  IKDPIITMNGVTIEKLDLVNTSGTLLPIPKPGSNMTIKADVSVKNPNYSSFKYSNTTTTI 125

Query: 427 YYYGKTVGEAHTPAGTAKARRTQHMNLSMEVTTAQILAEPNFADVIRSGILTMDSYTRLD 606
            Y    +GEA  P G +KAR+T  MN+++++ T +I++ P   D I SG+LTM+SYT + 
Sbjct: 126 SYRDAVIGEARGPPGKSKARKTMRMNVTIDIMTDKIMSHPGLQDDISSGLLTMNSYTSVG 185

Query: 607 GRXXXXXXXXXXXXXXMNCTIKANVTSQEIVEQKCKKKVSI 729
           GR              MNC+I  N+TSQ I +QKC KKV +
Sbjct: 186 GRVKLLNMIKKYVVVKMNCSITVNITSQSIQDQKCTKKVKL 226


>ref|XP_002509874.1| conserved hypothetical protein [Ricinus communis]
           gi|223549773|gb|EEF51261.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 222

 Score =  137 bits (344), Expect = 4e-30
 Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 7/218 (3%)
 Frame = +1

Query: 82  AMADSQVKPLTP--YPTRSYEDGDFSAIFQTKKLKRQRRAAKCVGCCMAGXXXXXXXXXX 255
           A  D Q KPL P  + +RS E+   S+   T+   R R   KC GCC A           
Sbjct: 2   ADTDQQAKPLAPAAFQSRSDEEAAASSSITTQFNFRHRNCIKCFGCCTAFLLIIAVTILI 61

Query: 256 XXXXXXXXSGPEIKMNRFTIPPLSINNIPA-----TINILVDVSVKNPNVASFKYNNSTT 420
                     P IKMN  T+  L +N   +      + + +D+SVKNPNVA F++NN TT
Sbjct: 62  LFFTVFHVKNPVIKMNEITLLQLELNKDGSLRNGTNVTLELDISVKNPNVAPFRFNNFTT 121

Query: 421 SIYYYGKTVGEAHTPAGTAKARRTQHMNLSMEVTTAQILAEPNFADVIRSGILTMDSYTR 600
           ++ Y G  VGEA TP+GTAKARRT HMN+++++   +IL  P     + SG LTM+S T 
Sbjct: 122 TVLYGGNNVGEARTPSGTAKARRTVHMNVTVDLIPEKILQVPGLLQDVSSGNLTMNSSTV 181

Query: 601 LDGRXXXXXXXXXXXXXXMNCTIKANVTSQEIVEQKCK 714
           + G+              +NC++  N +S+EI +Q+C+
Sbjct: 182 IGGKVKILKIVKKYLVVEVNCSVTYNFSSKEI-QQRCR 218


>ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799820 [Glycine max]
          Length = 219

 Score =  135 bits (339), Expect = 2e-29
 Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
 Frame = +1

Query: 97  QVKPLTPYPTRSYEDGDFSAIFQTKKLKRQRRAAKCVGCCMAGXXXXXXXXXXXXXXXXX 276
           Q +PL P   R   D D +      + +  ++  K   C +                   
Sbjct: 6   QARPLAPSIERQSSDEDNTT--PHPQTQGHKKLIKRCACPLISLLLIAIVIIVLIFTVFR 63

Query: 277 XSGPEIKMNRFTIPPLSINNIP-----ATINILVDVSVKNPNVASFKYNNSTTSIYYYGK 441
              P I MN   I  L + N       A ++++ DVSVKNPNVASF+Y+N+TTS+YY+G 
Sbjct: 64  VKDPVITMNSIKITKLQLVNTMSQQPGANMSLVADVSVKNPNVASFRYSNTTTSLYYHGV 123

Query: 442 TVGEAHTPAGTAKARRTQHMNLSMEVTTAQILAEPNFADVIRSGILTMDSYTRLDGRXXX 621
            VGEA  P G AKARRT  MN++++V TA++++ P+F   + SG+LTM S++R+ G+   
Sbjct: 124 IVGEARGPPGRAKARRTLRMNVTIDVITARVISSPDFVTDLGSGLLTMSSFSRVPGQVKI 183

Query: 622 XXXXXXXXXXXMNCTIKANVTSQEIVEQKCKKKVSI 729
                      MNCT   N+++Q I EQ CK+KV +
Sbjct: 184 LNLIKRHVVVKMNCTTTFNISTQAIKEQSCKRKVKL 219


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