BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004715
         (2959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   602   e-169
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   602   e-169
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   581   e-163
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   581   e-163
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   578   e-162

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  602 bits (1551), Expect = e-169
 Identities = 326/562 (58%), Positives = 401/562 (71%), Gaps = 17/562 (3%)
 Frame = +3

Query: 1323 KLLSLESLAFPEGSFLSRGGKVTVTNASIEIIPQGHWEYHV-SXXXXXXXXXXXXFRIDA 1499
            +LL L+ +AF +G FL    K  +   S     +G+ E HV +             +I A
Sbjct: 438  QLLDLDGIAFHQGGFLMANKKCELPTGSYRHHSKGYEEVHVPALKAAALGPGEELVKISA 497

Query: 1500 MPDWAQSAFKGMNCLDVIPTKLYQTALLTKENILLCAPTGSGERDVAILTILHQIASSSG 1679
            MPDWAQ AFKGM  L+ + +K+Y+TAL T EN+LLCAPTG+G+ +VA+LTIL QIA +  
Sbjct: 498  MPDWAQPAFKGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKTNVAMLTILQQIALNRN 557

Query: 1680 NDPM----NHKIVYLAPTEARVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQ--HTQI 1841
             D      N+KIVY+AP +A V ++V NLS RLQHY V+VK+++  D  +T  Q   TQI
Sbjct: 558  ADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQHYDVKVKELSG-DQSLTRQQIEETQI 616

Query: 1842 LVATPEKWDILVSRGSAYATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTSK 2021
            +V TPEKWDI ++R S   T T+                 RGPVLE+I+ARTV +  T+K
Sbjct: 617  IVTTPEKWDI-ITRKSGDRTYTQLVKLLIVDEIHLLHD-NRGPVLESIVARTVRQIETTK 674

Query: 2022 EHTRLVASSAPLPNYRDIASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPAVKHPLQRFQV 2201
            EH RLV  SA LPNY D+A FL+VD +KGLF+FDNSYRPCPLAQ Y    VK PLQRFQ+
Sbjct: 675  EHIRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQL 734

Query: 2202 MDDVCYQKTIAAAGKNQILIFVHSTKETLRTARWILDSALAQNALGRFLQEDSPSREVLN 2381
            M+DVCY+K +A AGK+Q+LIFVHS KET +TAR I D+ALA + LGRFL+EDS SRE+L+
Sbjct: 735  MNDVCYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILH 794

Query: 2382 SHAAVVRNSDLKDLFPYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLSS 2561
            SH  +V+N+DLKDL PYGFA+HHAG+   D QLVE LFA+GH+QVLV TA LAWG +L +
Sbjct: 795  SHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAWGVNLPA 854

Query: 2562 HTVIVKGTHI----------LSPLDVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVALM 2711
            HTVI+KGT I          LSPLDVMQMLG AGRPQ DSYGEGI++TG  E  YY++LM
Sbjct: 855  HTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLM 914

Query: 2712 NEQHPIESQLVSKLPSRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGLSPEDL 2891
            N+Q PIESQ VSKL  +L AEI  GTVQNA+EAC WIGYTYLY+RMLRNPTLYGLS + L
Sbjct: 915  NQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYGLSHDAL 974

Query: 2892 TTDRALEKRKADLIHSAATILD 2957
            T D  LE+R+ADLIHSAA ILD
Sbjct: 975  TRDITLEERRADLIHSAAIILD 996



 Score =  173 bits (438), Expect = 3e-40
 Identities = 138/460 (30%), Positives = 211/460 (45%), Gaps = 18/460 (3%)
 Frame = +3

Query: 1551 IPTKLYQTALLTKENILLCAPTGSGERDVAILTIL--HQIASSSGNDPMNHKIVYLAPTE 1724
            I T+++     T +N+L+ APTGSG+   A   IL  HQ  S S       + VY+AP E
Sbjct: 1361 IQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGSES-----IVRAVYIAPIE 1415

Query: 1725 A----RVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQHTQILVATPEKWDILVSRGSA 1892
            A    R +D  R     L    V++   T  D  +   +  Q++++TPEKWD L  R   
Sbjct: 1416 ALAKERYRDWERKFGRGLGMRVVELTGETATD--LKLLERGQVIISTPEKWDALSRRWKQ 1473

Query: 1893 YATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTSKEHTRLVASSAPLPNYRD 2072
                 +                G  PVLE I++R  + AS  +   R+VA S  L N +D
Sbjct: 1474 RKHVQQVSLFIIDELHLIGGQGG--PVLEVIVSRMRYIASQGENKIRIVALSTSLANAKD 1531

Query: 2073 IASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPA-VKHPLQRFQVMDDVCYQKTIA-AAGK 2246
            +  ++      GLF F    RP PL +++ Q   + +   R Q M    Y   +  A  +
Sbjct: 1532 LGEWIGATSH-GLFNFPPGVRPVPL-EIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNR 1589

Query: 2247 NQILIFVHSTKETLRTARWILDSALAQNALGRFLQEDSPSREVLNSHAAVVRNSDLKDLF 2426
               ++FV + K    TA  +   + A           SP  E L      ++   L+   
Sbjct: 1590 KPAIVFVPTRKHVRLTAVDLTTYSSADGGENPTFLLRSP--EELEPFVGKIQEEMLRATL 1647

Query: 2427 PYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLSSHTVIVKGT------- 2585
             +G    H GL   D ++V  LF  G +QV V+++ L WG  LS+H V+V GT       
Sbjct: 1648 RHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRE 1707

Query: 2586 --HILSPL-DVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVALMNEQHPIESQLVSKLP 2756
              H   P+ D++QM+G A RP  D+ G+ ++L       YY   + E  P+ES L   L 
Sbjct: 1708 NAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLH 1767

Query: 2757 SRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGL 2876
              L AEI  G ++N ++A D++ +T++Y R+ +NP  Y L
Sbjct: 1768 DNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNL 1807


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  602 bits (1551), Expect = e-169
 Identities = 326/562 (58%), Positives = 401/562 (71%), Gaps = 17/562 (3%)
 Frame = +3

Query: 1323 KLLSLESLAFPEGSFLSRGGKVTVTNASIEIIPQGHWEYHV-SXXXXXXXXXXXXFRIDA 1499
            +LL L+ +AF +G FL    K  +   S     +G+ E HV +             +I A
Sbjct: 405  QLLDLDGIAFHQGGFLMANKKCELPTGSYRHHSKGYEEVHVPALKAAALGPGEELVKISA 464

Query: 1500 MPDWAQSAFKGMNCLDVIPTKLYQTALLTKENILLCAPTGSGERDVAILTILHQIASSSG 1679
            MPDWAQ AFKGM  L+ + +K+Y+TAL T EN+LLCAPTG+G+ +VA+LTIL QIA +  
Sbjct: 465  MPDWAQPAFKGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKTNVAMLTILQQIALNRN 524

Query: 1680 NDPM----NHKIVYLAPTEARVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQ--HTQI 1841
             D      N+KIVY+AP +A V ++V NLS RLQHY V+VK+++  D  +T  Q   TQI
Sbjct: 525  ADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQHYDVKVKELSG-DQSLTRQQIEETQI 583

Query: 1842 LVATPEKWDILVSRGSAYATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTSK 2021
            +V TPEKWDI ++R S   T T+                 RGPVLE+I+ARTV +  T+K
Sbjct: 584  IVTTPEKWDI-ITRKSGDRTYTQLVKLLIVDEIHLLHD-NRGPVLESIVARTVRQIETTK 641

Query: 2022 EHTRLVASSAPLPNYRDIASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPAVKHPLQRFQV 2201
            EH RLV  SA LPNY D+A FL+VD +KGLF+FDNSYRPCPLAQ Y    VK PLQRFQ+
Sbjct: 642  EHIRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQL 701

Query: 2202 MDDVCYQKTIAAAGKNQILIFVHSTKETLRTARWILDSALAQNALGRFLQEDSPSREVLN 2381
            M+DVCY+K +A AGK+Q+LIFVHS KET +TAR I D+ALA + LGRFL+EDS SRE+L+
Sbjct: 702  MNDVCYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILH 761

Query: 2382 SHAAVVRNSDLKDLFPYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLSS 2561
            SH  +V+N+DLKDL PYGFA+HHAG+   D QLVE LFA+GH+QVLV TA LAWG +L +
Sbjct: 762  SHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAWGVNLPA 821

Query: 2562 HTVIVKGTHI----------LSPLDVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVALM 2711
            HTVI+KGT I          LSPLDVMQMLG AGRPQ DSYGEGI++TG  E  YY++LM
Sbjct: 822  HTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLM 881

Query: 2712 NEQHPIESQLVSKLPSRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGLSPEDL 2891
            N+Q PIESQ VSKL  +L AEI  GTVQNA+EAC WIGYTYLY+RMLRNPTLYGLS + L
Sbjct: 882  NQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYGLSHDAL 941

Query: 2892 TTDRALEKRKADLIHSAATILD 2957
            T D  LE+R+ADLIHSAA ILD
Sbjct: 942  TRDITLEERRADLIHSAAIILD 963



 Score =  173 bits (438), Expect = 3e-40
 Identities = 138/460 (30%), Positives = 211/460 (45%), Gaps = 18/460 (3%)
 Frame = +3

Query: 1551 IPTKLYQTALLTKENILLCAPTGSGERDVAILTIL--HQIASSSGNDPMNHKIVYLAPTE 1724
            I T+++     T +N+L+ APTGSG+   A   IL  HQ  S S       + VY+AP E
Sbjct: 1328 IQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGSES-----IVRAVYIAPIE 1382

Query: 1725 A----RVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQHTQILVATPEKWDILVSRGSA 1892
            A    R +D  R     L    V++   T  D  +   +  Q++++TPEKWD L  R   
Sbjct: 1383 ALAKERYRDWERKFGRGLGMRVVELTGETATD--LKLLERGQVIISTPEKWDALSRRWKQ 1440

Query: 1893 YATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTSKEHTRLVASSAPLPNYRD 2072
                 +                G  PVLE I++R  + AS  +   R+VA S  L N +D
Sbjct: 1441 RKHVQQVSLFIIDELHLIGGQGG--PVLEVIVSRMRYIASQGENKIRIVALSTSLANAKD 1498

Query: 2073 IASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPA-VKHPLQRFQVMDDVCYQKTIA-AAGK 2246
            +  ++      GLF F    RP PL +++ Q   + +   R Q M    Y   +  A  +
Sbjct: 1499 LGEWIGATSH-GLFNFPPGVRPVPL-EIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNR 1556

Query: 2247 NQILIFVHSTKETLRTARWILDSALAQNALGRFLQEDSPSREVLNSHAAVVRNSDLKDLF 2426
               ++FV + K    TA  +   + A           SP  E L      ++   L+   
Sbjct: 1557 KPAIVFVPTRKHVRLTAVDLTTYSSADGGENPTFLLRSP--EELEPFVGKIQEEMLRATL 1614

Query: 2427 PYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLSSHTVIVKGT------- 2585
             +G    H GL   D ++V  LF  G +QV V+++ L WG  LS+H V+V GT       
Sbjct: 1615 RHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRE 1674

Query: 2586 --HILSPL-DVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVALMNEQHPIESQLVSKLP 2756
              H   P+ D++QM+G A RP  D+ G+ ++L       YY   + E  P+ES L   L 
Sbjct: 1675 NAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLH 1734

Query: 2757 SRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGL 2876
              L AEI  G ++N ++A D++ +T++Y R+ +NP  Y L
Sbjct: 1735 DNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNL 1774


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  581 bits (1498), Expect = e-163
 Identities = 311/563 (55%), Positives = 402/563 (71%), Gaps = 18/563 (3%)
 Frame = +3

Query: 1323 KLLSLESLAFPEGSFLSRGGKVTVTNASIEIIPQGHWEYHV-SXXXXXXXXXXXXFRIDA 1499
            ++L L+S+AF +G F     K  + + S   + +G+ E HV +             +I +
Sbjct: 442  QMLDLDSIAFTQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVKISS 501

Query: 1500 MPDWAQSAFKGMNCLDVIPTKLYQTALLTKENILLCAPTGSGERDVAILTILHQIA---- 1667
            MPDWAQ AFKGM  L+ + +K+Y+TAL   +N+LLCAPTG+G+ +VA+LTIL QIA    
Sbjct: 502  MPDWAQPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRN 561

Query: 1668 -SSSGNDPMNHKIVYLAPTEARVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQ--HTQ 1838
                  D   +KIVY+AP +A V ++V NLS RLQ Y V+V++++  D  +T  Q   TQ
Sbjct: 562  PEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQEYDVKVRELSG-DQSLTRQQIEETQ 620

Query: 1839 ILVATPEKWDILVSRGSAYATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTS 2018
            I+V TPEKWDI ++R S   T T+                 RGPVLE+I+ARTV +  T+
Sbjct: 621  IIVTTPEKWDI-ITRKSGDRTYTQLVKLLIIDEIHLLHD-NRGPVLESIVARTVRQIETT 678

Query: 2019 KEHTRLVASSAPLPNYRDIASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPAVKHPLQRFQ 2198
            K++ RLV  SA LPNY D+A FL+VD +KGLFYFDNSYRP PL+Q Y    VK PLQRFQ
Sbjct: 679  KDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQ 738

Query: 2199 VMDDVCYQKTIAAAGKNQILIFVHSTKETLRTARWILDSALAQNALGRFLQEDSPSREVL 2378
            +M+D+CY+K +A AGK+Q+LIFVHS KET +TAR I D+ALA + LGRFL+EDS SRE+L
Sbjct: 739  LMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLGRFLKEDSASREIL 798

Query: 2379 NSHAAVVRNSDLKDLFPYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLS 2558
            ++H  +V+++DLKDL PYGFA+HHAG+   D QLVE+LFA+GH+QVLV TA LAWG +L 
Sbjct: 799  HTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLP 858

Query: 2559 SHTVIVKGTHI----------LSPLDVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVAL 2708
            +HTVI+KGT I          LSPLDVMQMLG AGRPQ DSYGEGI++TG  E  YY++L
Sbjct: 859  AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSL 918

Query: 2709 MNEQHPIESQLVSKLPSRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGLSPED 2888
            MN+Q PIESQ VSKL  +L AEI  GTVQNA+EAC+WIGYTYLY+RMLRNP+LYG++P+ 
Sbjct: 919  MNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPDV 978

Query: 2889 LTTDRALEKRKADLIHSAATILD 2957
            LT D  LE+R+ADLIH+AATILD
Sbjct: 979  LTRDITLEERRADLIHTAATILD 1001



 Score =  171 bits (433), Expect = 1e-39
 Identities = 136/470 (28%), Positives = 215/470 (45%), Gaps = 16/470 (3%)
 Frame = +3

Query: 1515 QSAFKGMNCLDVIPTKLYQTALLTKENILLCAPTGSGERDVAILTILHQIASSSGNDPMN 1694
            +S +K     + + T+++     + +N+L+ APTGSG+   A   IL       G D + 
Sbjct: 1354 ESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRN--HQKGPDSVM 1411

Query: 1695 HKIVYLAPTEA----RVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQHTQILVATPEK 1862
             ++VY+AP EA    R +D  R     L+   V++   T  D  +   +  QI+++TPEK
Sbjct: 1412 -RVVYVAPVEALAKERYRDWERKFGGGLKLRVVELTGETATD--LKLLEKGQIIISTPEK 1468

Query: 1863 WDILVSRGSAYATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTSKEHTRLVA 2042
            WD L  R        +                G  P+LE +++R  + AS  +  +R+VA
Sbjct: 1469 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGG--PILEVVVSRMRYIASQVENKSRIVA 1526

Query: 2043 SSAPLPNYRDIASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPA-VKHPLQRFQVMDDVCY 2219
             S  L N +D+  ++      GLF F    RP PL +++ Q   + +   R Q M    Y
Sbjct: 1527 LSTSLANAKDLGEWIGATSH-GLFNFPPGVRPVPL-EIHIQGIDITNFEARMQAMTKPTY 1584

Query: 2220 QKTIAAAGKNQ-ILIFVHSTKETLRTARWILDSALAQNALGRFLQEDSPSREVLNSHAAV 2396
               +  A   +  LIFV + K    TA  ++  + A +    FL     S E L      
Sbjct: 1585 TAIVQHAKNGKPALIFVPTRKHVRLTAVDMITYSGADSGEKPFLLR---SAEELEPFLDK 1641

Query: 2397 VRNSDLKDLFPYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLSSHTVIV 2576
            + +  LK     G    H GL + D  +V  LF  G +QV VL + + WG  L +H V+V
Sbjct: 1642 ITDEMLKVTLREGVGYLHEGLNSLDHDIVTQLFEAGWIQVCVLNSSMCWGVTLLAHLVVV 1701

Query: 2577 KGTHILSP----------LDVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVALMNEQHP 2726
             GT                D++QM+G A RP  D+ G+ ++L       YY   + E  P
Sbjct: 1702 MGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFP 1761

Query: 2727 IESQLVSKLPSRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGL 2876
            +ES L   L   L AEI  G ++N ++A D++ +T++Y R+ +NP  Y L
Sbjct: 1762 VESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNL 1811


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  581 bits (1497), Expect = e-163
 Identities = 311/563 (55%), Positives = 402/563 (71%), Gaps = 18/563 (3%)
 Frame = +3

Query: 1323 KLLSLESLAFPEGSFLSRGGKVTVTNASIEIIPQGHWEYHV-SXXXXXXXXXXXXFRIDA 1499
            ++L L+S+AF +G F     K  + + S   + +G+ E HV +             +I +
Sbjct: 442  QMLDLDSIAFAQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVKISS 501

Query: 1500 MPDWAQSAFKGMNCLDVIPTKLYQTALLTKENILLCAPTGSGERDVAILTILHQIA---- 1667
            MPDWAQ AFKGM  L+ + +K+Y+TAL   +N+LLCAPTG+G+ +VA+LTIL QIA    
Sbjct: 502  MPDWAQPAFKGMTQLNRVQSKVYETALFQPDNLLLCAPTGAGKTNVAVLTILQQIARHRN 561

Query: 1668 -SSSGNDPMNHKIVYLAPTEARVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQ--HTQ 1838
                  D   +KIVY+AP +A V ++V NLS RLQ Y V+V++++  D  +T  Q   TQ
Sbjct: 562  PKDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYDVKVRELSG-DQSLTRQQIEETQ 620

Query: 1839 ILVATPEKWDILVSRGSAYATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTS 2018
            I+V TPEKWDI ++R S   T T+                 RGPVLE+I+ARTV +  T+
Sbjct: 621  IIVTTPEKWDI-ITRKSGDRTYTQLVKLLIIDEIHLLHD-NRGPVLESIVARTVRQIETT 678

Query: 2019 KEHTRLVASSAPLPNYRDIASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPAVKHPLQRFQ 2198
            K++ RLV  SA LPNY D+A FL+VD +KGLFYFDNSYRP PL+Q Y    VK PLQRFQ
Sbjct: 679  KDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQ 738

Query: 2199 VMDDVCYQKTIAAAGKNQILIFVHSTKETLRTARWILDSALAQNALGRFLQEDSPSREVL 2378
            +M+D+CY+K +A AGK+Q+LIFVHS KET +TAR I D+ALA + LGRFL+EDS SRE+L
Sbjct: 739  LMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREIL 798

Query: 2379 NSHAAVVRNSDLKDLFPYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLS 2558
            ++H  +V+++DLKDL PYGFA+HHAG+   D QLVE+LFA+GH+QVLV TA LAWG +L 
Sbjct: 799  HTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLP 858

Query: 2559 SHTVIVKGTHI----------LSPLDVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVAL 2708
            +HTVI+KGT I          LSPLDVMQMLG AGRPQ DSYGEGI++TG  E  YY++L
Sbjct: 859  AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSL 918

Query: 2709 MNEQHPIESQLVSKLPSRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGLSPED 2888
            MN+Q PIESQ VSKL  +L AEI  GTVQNA+EAC+WIGYTYLY+RMLRNP+LYG++P+ 
Sbjct: 919  MNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPDV 978

Query: 2889 LTTDRALEKRKADLIHSAATILD 2957
            LT D  LE+R+ADLIH+AATILD
Sbjct: 979  LTRDITLEERRADLIHTAATILD 1001



 Score =  167 bits (423), Expect = 2e-38
 Identities = 135/472 (28%), Positives = 215/472 (45%), Gaps = 18/472 (3%)
 Frame = +3

Query: 1515 QSAFKGMNCLDVIPTKLYQTALLTKENILLCAPTGSGERDVAILTIL--HQIASSSGNDP 1688
            +S +K     + + T+++     + +N+L+ APTGSG+   A   IL  HQ    S    
Sbjct: 1354 ESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKWPDSVM-- 1411

Query: 1689 MNHKIVYLAPTEA----RVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQHTQILVATP 1856
               ++VY+AP E+    R +D  +     L+   V++   T  D  +   +  QI+++TP
Sbjct: 1412 ---RVVYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATD--LKLLEKGQIIISTP 1466

Query: 1857 EKWDILVSRGSAYATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTSKEHTRL 2036
            EKWD L  R        +                G  P+LE +++R  + AS  +   R+
Sbjct: 1467 EKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGG--PILEVVVSRMRYIASQVENKIRV 1524

Query: 2037 VASSAPLPNYRDIASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPA-VKHPLQRFQVMDDV 2213
            VA S  L N +D+  ++      GLF F    RP PL +++ Q   + +   R Q M   
Sbjct: 1525 VALSTSLANAKDLGEWIGATSH-GLFNFPPGVRPVPL-EIHIQGIDIANFEARMQAMTKP 1582

Query: 2214 CYQKTIAAAGKNQ-ILIFVHSTKETLRTARWILDSALAQNALGRFLQEDSPSREVLNSHA 2390
             Y   +  A   +  L+FV + K    TA  ++  + A +    FL     S E L    
Sbjct: 1583 TYTAIVQHAKNGKPALVFVPTRKHVRLTAVDLITYSGADSGEKPFLLR---SAEELEPFL 1639

Query: 2391 AVVRNSDLKDLFPYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLSSHTV 2570
              + +  LK     G    H GL + D  +V  LF  G +QV VL + + WG  LS+H V
Sbjct: 1640 DKITDEMLKVTLREGVGYLHEGLNSLDRDIVTQLFEAGWIQVCVLNSSMCWGVTLSAHLV 1699

Query: 2571 IVKGTHILSP----------LDVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVALMNEQ 2720
            +V GT                D++QM+G A RP  D+ G+ ++L       YY   + E 
Sbjct: 1700 VVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEA 1759

Query: 2721 HPIESQLVSKLPSRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGL 2876
             P+ES L   L   L AEI  G ++N ++A D++ +T++Y R+ +NP  Y L
Sbjct: 1760 FPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNL 1811


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
            putative [Ricinus communis]
          Length = 1809

 Score =  578 bits (1491), Expect = e-162
 Identities = 315/563 (55%), Positives = 397/563 (70%), Gaps = 18/563 (3%)
 Frame = +3

Query: 1323 KLLSLESLAFPEGSFLSRGGKVTVTNASIEIIPQGHWEYHV-SXXXXXXXXXXXXFRIDA 1499
            +LL LES+AF +G  L    K  +   S     +G+ E HV +             +I  
Sbjct: 70   QLLDLESIAFEQGGHLMATKKCDLPVGSYRHTSKGYEEVHVPALKPRPIASDEKLVKISD 129

Query: 1500 MPDWAQSAFKGMNCLDVIPTKLYQTALLTKENILLCAPTGSGERDVAILTILHQIASSSG 1679
            MP WAQ AFKGM  L+ + +++Y+TAL   +N+LLCAPTG+G+ +VA+LTIL Q+     
Sbjct: 130  MPGWAQPAFKGMQQLNRVQSRVYETALFKADNVLLCAPTGAGKTNVAVLTILQQLGLKMN 189

Query: 1680 NDP--MNH---KIVYLAPTEARVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQ--HTQ 1838
             +    NH   KIVY+AP +A V ++V NLS RLQ Y V+V++++  D  +T  Q   TQ
Sbjct: 190  KEDGSFNHSDYKIVYVAPMKALVAEVVGNLSNRLQEYGVKVRELSG-DQSLTRQQIEETQ 248

Query: 1839 ILVATPEKWDILVSRGSAYATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTS 2018
            I+V TPEKWDI ++R S   T T+                 RGPVLE+I+ARTV +  T+
Sbjct: 249  IIVTTPEKWDI-ITRKSGDRTYTQLVKLLIIDEIHLLHD-NRGPVLESIVARTVRQIETT 306

Query: 2019 KEHTRLVASSAPLPNYRDIASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPAVKHPLQRFQ 2198
            KEH RLV  SA LPNY D+A FL+VD +KGLF+FDNSYRP PL+Q Y    VK PLQRFQ
Sbjct: 307  KEHIRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQ 366

Query: 2199 VMDDVCYQKTIAAAGKNQILIFVHSTKETLRTARWILDSALAQNALGRFLQEDSPSREVL 2378
            +M+D+CY+K +A AGK+Q+LIFVHS KET +TAR I DSALA + LGRFL+EDS SRE+L
Sbjct: 367  LMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDSALANDTLGRFLKEDSASREIL 426

Query: 2379 NSHAAVVRNSDLKDLFPYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLS 2558
             SH  +V+++DLKDL PYGFA+HHAG+   D QLVE+LFA+GH+QVLV TA LAWG +L 
Sbjct: 427  QSHTDMVKSNDLKDLLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAWGVNLP 486

Query: 2559 SHTVIVKGTHI----------LSPLDVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVAL 2708
            +HTVI+KGT I          LSPLDVMQMLG AGRPQ DSYGEGI++TG  E  YY++L
Sbjct: 487  AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHTELQYYLSL 546

Query: 2709 MNEQHPIESQLVSKLPSRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGLSPED 2888
            MN+Q PIESQ VSKL  +L AEI  GTVQNA+EAC+W+GYTYLYIRMLRNPTLYGL+P+ 
Sbjct: 547  MNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYGLAPDV 606

Query: 2889 LTTDRALEKRKADLIHSAATILD 2957
            LT D  LE+R+ADLIHS+ATILD
Sbjct: 607  LTRDITLEERRADLIHSSATILD 629



 Score =  170 bits (430), Expect = 2e-39
 Identities = 136/498 (27%), Positives = 231/498 (46%), Gaps = 17/498 (3%)
 Frame = +3

Query: 1515 QSAFKGMNCLDVIPTKLYQTALLTKENILLCAPTGSGERDVAILTILHQIASSSGNDPMN 1694
            ++ ++     + + T+++     T +N+L+ APTGSG+   A   IL       G D + 
Sbjct: 982  EALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRN--HQKGPDSVT 1039

Query: 1695 HKIVYLAPTEA----RVKDLVRNLSARLQHYPVQVKDITLLDHIITTCQHTQILVATPEK 1862
             + VY+AP EA    R +D  R     L    V++   T  D  +   + +QI+++TPEK
Sbjct: 1040 -RAVYIAPLEAIAKERYRDWERKFGRGLGMRVVELTGETATD--LKLLEKSQIIISTPEK 1096

Query: 1863 WDILVSRGSAYATTTKXXXXXXXXXXXXXXXXGRGPVLEAILARTVWEASTSKEHTRLVA 2042
            WD L  R        +                G  P+LE I++R  + AS  +   R+VA
Sbjct: 1097 WDALSRRWKQRKYVQQVSLFIIDELHLIGGQGG--PILEVIVSRMRYIASQIENKIRIVA 1154

Query: 2043 SSAPLPNYRDIASFLKVDQEKGLFYFDNSYRPCPLAQLYCQPA-VKHPLQRFQVMDDVCY 2219
             S+ L N +D+  ++      GLF F    RP PL +++ Q   + +   R Q M    Y
Sbjct: 1155 LSSSLANAKDLGEWIGATSH-GLFNFPPGVRPVPL-EIHIQGVDIANFEARMQAMTKPTY 1212

Query: 2220 QKTIAAAGKNQ-ILIFVHSTKETLRTARWILDSALAQNA-LGRFLQEDSPSREVLNSHAA 2393
               +  A   +  ++FV + K    TA  ++  + A +     F+     S E L     
Sbjct: 1213 TAIVQHAKNGKPAIVFVPTRKHVRLTAVDLMTYSSADSGEKPAFMMR---SIEELEPFVG 1269

Query: 2394 VVRNSDLKDLFPYGFAVHHAGLGTEDSQLVENLFAEGHLQVLVLTADLAWGAHLSSHTVI 2573
             V++  L+     G    H GL + D ++V  LF  G +QV V+++ + WG  L++H V+
Sbjct: 1270 RVQDEMLRSTLRQGVGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLAAHLVV 1329

Query: 2574 VKGT---------HILSPL-DVMQMLGCAGRPQRDSYGEGIVLTGILEAHYYVALMNEQH 2723
            V GT         H   P+ D++QM+G A RP  D+ G+ ++L       YY   + E  
Sbjct: 1330 VMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAF 1389

Query: 2724 PIESQLVSKLPSRLKAEICHGTVQNAKEACDWIGYTYLYIRMLRNPTLYGLSPEDLTTDR 2903
            P+ES L   L     AE+  G ++N ++A D++ +T++Y R+ +NP  Y L      + R
Sbjct: 1390 PVESHLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHR 1446

Query: 2904 ALEKRKADLIHSAATILD 2957
             L    ++L+ +  + L+
Sbjct: 1447 HLSDHLSELVENTLSDLE 1464