BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004713
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding pro...   476   e-132
gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum...   476   e-132
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso...   475   e-132
dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein...   474   e-131
gb|ABB55370.1| chlorophyll a-b binding protein 3C-like [Solanum ...   474   e-131

>sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding protein 3C, chloroplastic;
           AltName: Full=LHCII type I CAB-3C; Short=LHCP; Flags:
           Precursor gi|224932|prf||1204205G protein 3C,chlorophyll
           binding
          Length = 267

 Score =  476 bits (1225), Expect = e-132
 Identities = 227/247 (91%), Positives = 241/247 (97%)
 Frame = +3

Query: 174 GKSVKLAPSTSELLFGEGRVTMRKTASKSKPVSSTSPWYGPDRVKYLGPFSGEAPSYLTG 353
           GK+VKL+PS+SE+  G GRVTMRKTA+K+KP SS SPWYGPDRVKYLGPFSGE+PSYLTG
Sbjct: 15  GKAVKLSPSSSEIT-GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTG 73

Query: 354 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCIFPELLSRNGVKFGEAVWF 533
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC+FPELL+RNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 534 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 713
           KAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVVDPLYPG
Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPG 193

Query: 714 GSFDPLGLADDPEAFSELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPVN 893
           GSFDPLGLADDPEAF+ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL+DPVN
Sbjct: 194 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 894 NNAWAFA 914
           NNAWAFA
Sbjct: 254 NNAWAFA 260


>gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score =  476 bits (1224), Expect = e-132
 Identities = 226/247 (91%), Positives = 241/247 (97%)
 Frame = +3

Query: 174 GKSVKLAPSTSELLFGEGRVTMRKTASKSKPVSSTSPWYGPDRVKYLGPFSGEAPSYLTG 353
           GK+VKL P+TS++L GEGR+TMRKTA K+K VSS SPWYGPDRVKYLGPFSGEAPSYLTG
Sbjct: 15  GKAVKLNPTTSQIL-GEGRITMRKTAGKTKNVSSDSPWYGPDRVKYLGPFSGEAPSYLTG 73

Query: 354 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCIFPELLSRNGVKFGEAVWF 533
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC+FPELL+RNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 534 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 713
           KAGAQIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGA+EGYR+AGGPLGEV+DPLYPG
Sbjct: 134 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAIEGYRVAGGPLGEVIDPLYPG 193

Query: 714 GSFDPLGLADDPEAFSELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPVN 893
           GSFDPLGLA+DPEAF+ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL+DPVN
Sbjct: 194 GSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 894 NNAWAFA 914
           NNAWAFA
Sbjct: 254 NNAWAFA 260


>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
          Length = 266

 Score =  475 bits (1223), Expect = e-132
 Identities = 228/247 (92%), Positives = 240/247 (97%)
 Frame = +3

Query: 174 GKSVKLAPSTSELLFGEGRVTMRKTASKSKPVSSTSPWYGPDRVKYLGPFSGEAPSYLTG 353
           GK+VKLAP+ SE+ FGEGRV+MRKTA K KPVSS SPWYGPDRVKYLGPFSGEAPSYLTG
Sbjct: 14  GKAVKLAPAASEV-FGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 354 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCIFPELLSRNGVKFGEAVWF 533
           EF GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL+RNGVKFGEAVWF
Sbjct: 73  EFAGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLARNGVKFGEAVWF 132

Query: 534 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 713
           KAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQV+LMGAVEGYR+AGGPLGEVVDPLYPG
Sbjct: 133 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPG 192

Query: 714 GSFDPLGLADDPEAFSELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPVN 893
           GSFDPLGLADDPEAF+ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL+DPVN
Sbjct: 193 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252

Query: 894 NNAWAFA 914
           NNAWAFA
Sbjct: 253 NNAWAFA 259


>dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 267

 Score =  474 bits (1221), Expect = e-131
 Identities = 225/247 (91%), Positives = 242/247 (97%)
 Frame = +3

Query: 174 GKSVKLAPSTSELLFGEGRVTMRKTASKSKPVSSTSPWYGPDRVKYLGPFSGEAPSYLTG 353
           GK+VKL+PS+SE+  G G+VTMRKTASK+KPVSS SPWYGPDRVKYLGPFSGE+PSYLTG
Sbjct: 15  GKAVKLSPSSSEIT-GNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTG 73

Query: 354 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCIFPELLSRNGVKFGEAVWF 533
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC+FPELL+RNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 534 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 713
           KAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AGGPLGEVVDPLYPG
Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPG 193

Query: 714 GSFDPLGLADDPEAFSELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPVN 893
           GSFDPLGLA+DPEAF+ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL+DPVN
Sbjct: 194 GSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 894 NNAWAFA 914
           NNAWA+A
Sbjct: 254 NNAWAYA 260


>gb|ABB55370.1| chlorophyll a-b binding protein 3C-like [Solanum tuberosum]
          Length = 267

 Score =  474 bits (1219), Expect = e-131
 Identities = 225/247 (91%), Positives = 240/247 (97%)
 Frame = +3

Query: 174 GKSVKLAPSTSELLFGEGRVTMRKTASKSKPVSSTSPWYGPDRVKYLGPFSGEAPSYLTG 353
           GK+VKL+PS+SE+  G GR+TMRK+ +K+KP SS SPWYGPDRVKYLGPFSGEAPSYLTG
Sbjct: 15  GKAVKLSPSSSEIT-GNGRITMRKSVAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTG 73

Query: 354 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCIFPELLSRNGVKFGEAVWF 533
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC+FPELL+RNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 534 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 713
           KAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVVDPLYPG
Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPG 193

Query: 714 GSFDPLGLADDPEAFSELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPVN 893
           GSFDPLGLADDPEAF+ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL+DPVN
Sbjct: 194 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 894 NNAWAFA 914
           NNAWAFA
Sbjct: 254 NNAWAFA 260