BLASTX nr result

ID: Cimicifuga21_contig00004705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004705
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN41027.1| unknown [Picea sitchensis]                             116   2e-24
ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121...   114   6e-24
gb|AFK45499.1| unknown [Lotus japonicus]                              114   8e-24
ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera] gi|...   114   8e-24
ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin...   113   2e-23

>gb|ACN41027.1| unknown [Picea sitchensis]
          Length = 140

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = -1

Query: 427 RDNKKTRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHNTLLPKKSGKGKDHELGS 248
           RDNKK RIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIH  LLPKK+GKGK  E+GS
Sbjct: 76  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHGVLLPKKAGKGKGAEIGS 135

Query: 247 ASQEF 233
           ASQEF
Sbjct: 136 ASQEF 140


>ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1|
           Histone H2A [Medicago truncatula]
           gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold
           [Medicago truncatula] gi|124360160|gb|ABN08176.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355501355|gb|AES82558.1| Histone H2A [Medicago
           truncatula] gi|355501357|gb|AES82560.1| Histone H2A
           [Medicago truncatula] gi|388498640|gb|AFK37386.1|
           unknown [Medicago truncatula]
          Length = 139

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/65 (90%), Positives = 60/65 (92%)
 Frame = -1

Query: 427 RDNKKTRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHNTLLPKKSGKGKDHELGS 248
           RDNKK RIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIH TLLPKK GKGK  E+GS
Sbjct: 76  RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKG-EIGS 134

Query: 247 ASQEF 233
           ASQEF
Sbjct: 135 ASQEF 139


>gb|AFK45499.1| unknown [Lotus japonicus]
          Length = 141

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/65 (89%), Positives = 61/65 (93%)
 Frame = -1

Query: 427 RDNKKTRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHNTLLPKKSGKGKDHELGS 248
           RDNKK RIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIH TLLPKK+GKGK  E+GS
Sbjct: 78  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKAGKGKG-EIGS 136

Query: 247 ASQEF 233
           ASQEF
Sbjct: 137 ASQEF 141


>ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera]
           gi|147815277|emb|CAN70026.1| hypothetical protein
           VITISV_030174 [Vitis vinifera]
          Length = 139

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/65 (89%), Positives = 61/65 (93%)
 Frame = -1

Query: 427 RDNKKTRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHNTLLPKKSGKGKDHELGS 248
           RDNKK RIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIH TLLPKK+GKGK  E+GS
Sbjct: 76  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKTGKGKG-EIGS 134

Query: 247 ASQEF 233
           ASQEF
Sbjct: 135 ASQEF 139


>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
           gi|255625587|gb|ACU13138.1| unknown [Glycine max]
          Length = 140

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/65 (89%), Positives = 60/65 (92%)
 Frame = -1

Query: 427 RDNKKTRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHNTLLPKKSGKGKDHELGS 248
           RDNKK RIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIH TLLPKK GKGK  E+GS
Sbjct: 77  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKG-EIGS 135

Query: 247 ASQEF 233
           ASQEF
Sbjct: 136 ASQEF 140


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