BLASTX nr result

ID: Cimicifuga21_contig00004701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004701
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633330.1| PREDICTED: mitochondrial import inner membra...   129   3e-28
ref|XP_002522766.1| Import inner membrane translocase subunit TI...   123   1e-26
ref|XP_002298860.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002316775.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002264515.1| PREDICTED: mitochondrial import inner membra...   115   4e-24

>ref|XP_003633330.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           TIM50-like [Vitis vinifera] gi|296085020|emb|CBI28435.3|
           unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  129 bits (323), Expect = 3e-28
 Identities = 67/105 (63%), Positives = 82/105 (78%)
 Frame = +1

Query: 1   GYATYAYTIEEVTDKTKALREPTPYIVEDDAPALVKFQASLYSAAMTVPANSIKLYLDLR 180
           GYA+YAYT++EV +KTKA R    Y V D+A +L KFQA LYSAAMTVPA +I+LYLDLR
Sbjct: 88  GYASYAYTLDEVDEKTKAFRTSAKYTVGDNASSLDKFQALLYSAAMTVPAKAIELYLDLR 147

Query: 181 RSIEGGVQRIAEPCAEKLLPDLHPDWEENRLFTLVLDLSETLVYT 315
           R IE  ++  AEP +EKLLPDLHP   E  +FTLVLDL+ETL+Y+
Sbjct: 148 RPIEEQIRGFAEPSSEKLLPDLHP--LEQHIFTLVLDLNETLLYS 190


>ref|XP_002522766.1| Import inner membrane translocase subunit TIM50-A, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223538004|gb|EEF39617.1| Import inner membrane
           translocase subunit TIM50-A, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 395

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/105 (59%), Positives = 80/105 (76%)
 Frame = +1

Query: 1   GYATYAYTIEEVTDKTKALREPTPYIVEDDAPALVKFQASLYSAAMTVPANSIKLYLDLR 180
           GYATYAYT+ EV +KTKALRE   Y   +DA +  K++  LYSAAMTVPA +++LYLDLR
Sbjct: 123 GYATYAYTLNEVEEKTKALRESINYKTSEDASSAEKYKDLLYSAAMTVPAKAVQLYLDLR 182

Query: 181 RSIEGGVQRIAEPCAEKLLPDLHPDWEENRLFTLVLDLSETLVYT 315
           R+IE  V+   EP ++KLLPDLHP   E  +FTLVLDL+ET++Y+
Sbjct: 183 RNIEEQVKGFTEPSSDKLLPDLHP--AEQHVFTLVLDLNETIIYS 225


>ref|XP_002298860.1| predicted protein [Populus trichocarpa] gi|222846118|gb|EEE83665.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/105 (56%), Positives = 79/105 (75%)
 Frame = +1

Query: 1   GYATYAYTIEEVTDKTKALREPTPYIVEDDAPALVKFQASLYSAAMTVPANSIKLYLDLR 180
           GYA+YA++++EV +KTKALRE   Y   +DA  + K+Q  LYS AMTVPA +++LYLD+R
Sbjct: 81  GYASYAHSLDEVEEKTKALRESVNYTAANDASNVEKYQGLLYSTAMTVPAKAVELYLDMR 140

Query: 181 RSIEGGVQRIAEPCAEKLLPDLHPDWEENRLFTLVLDLSETLVYT 315
           R +E  V+   EP AEKLLPDLHP   E  +FTLVLDL+ET++Y+
Sbjct: 141 RLLEEHVKGFTEPAAEKLLPDLHP--AEQHVFTLVLDLNETIIYS 183


>ref|XP_002316775.1| predicted protein [Populus trichocarpa] gi|222859840|gb|EEE97387.1|
           predicted protein [Populus trichocarpa]
          Length = 361

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/105 (53%), Positives = 77/105 (73%)
 Frame = +1

Query: 1   GYATYAYTIEEVTDKTKALREPTPYIVEDDAPALVKFQASLYSAAMTVPANSIKLYLDLR 180
           GYA+YAY+++EV +KTK LRE   Y   +DA  + K+Q  LYS  MTVPA +++LYLDLR
Sbjct: 82  GYASYAYSLDEVEEKTKTLRESVNYTASNDASNVEKYQGLLYSTVMTVPAKAVELYLDLR 141

Query: 181 RSIEGGVQRIAEPCAEKLLPDLHPDWEENRLFTLVLDLSETLVYT 315
           + +E  V+   EP ++KLLPDLHP   E  +FTLVLDL+ET++Y+
Sbjct: 142 KLLEEHVKGFTEPASDKLLPDLHP--AEQHVFTLVLDLNETIIYS 184


>ref|XP_002264515.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           TIM50 [Vitis vinifera] gi|296089900|emb|CBI39719.3|
           unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/105 (57%), Positives = 76/105 (72%)
 Frame = +1

Query: 1   GYATYAYTIEEVTDKTKALREPTPYIVEDDAPALVKFQASLYSAAMTVPANSIKLYLDLR 180
           GYA+YAYT++EV +KTKA R      VEDDA A  KF+A  Y++A+TVPA +I LYLD+R
Sbjct: 97  GYASYAYTLDEVDEKTKAFRASAKDSVEDDASAFDKFKALAYTSAVTVPAKAIDLYLDMR 156

Query: 181 RSIEGGVQRIAEPCAEKLLPDLHPDWEENRLFTLVLDLSETLVYT 315
           R IE  V    EP ++KLLPDLHP   E  + TLVLDL+ETL+Y+
Sbjct: 157 RLIEEQVHGFTEPLSDKLLPDLHP--MEQHVLTLVLDLNETLIYS 199


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