BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004689
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   271   1e-70
emb|CBI27748.3| unnamed protein product [Vitis vinifera]              271   1e-70
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   264   2e-68
ref|XP_002516202.1| zinc finger protein, putative [Ricinus commu...   263   5e-68
ref|XP_002516203.1| zinc finger protein, putative [Ricinus commu...   235   1e-59

>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  271 bits (694), Expect = 1e-70
 Identities = 119/186 (63%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
 Frame = -2

Query: 551 YSSITEIGESSNTKDS---TFICQICIEPKTQNKSFSVKGCTHSYCSDCMAMYVGSKIQE 381
           + S+TE G+ SN+K     TF+C+ICI+PK  N SFS+KGC HSYCSDCM  YV SK+Q+
Sbjct: 103 FPSVTETGQPSNSKPDPPPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQD 162

Query: 380 NVILIGCPEPNCVGVLELEFCQSILPQNVFDRWGSALCETLIPRRQRFYCPFKDCSALLL 201
           NV  I CP PNC GVLE + C+ ILP +VFDRWG+ALCE LI   Q+FYCP+KDCSALL+
Sbjct: 163 NVSRISCPAPNCTGVLEPQQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLI 222

Query: 200 DDEGIVVRQSECPHCGRLFCAQCKVPWHSEINCKEFQRLNEGEREREDIMLMKLAKEKKW 21
            DEG V+++SECP+C RLFCAQC+VPWHS I+C EFQ+LN+ ER REDI++M LAK   W
Sbjct: 223 RDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCGEFQKLNKDERGREDILMMNLAKTNNW 282

Query: 20  QRCPKC 3
           +RCPKC
Sbjct: 283 KRCPKC 288


>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  271 bits (694), Expect = 1e-70
 Identities = 119/186 (63%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
 Frame = -2

Query: 551 YSSITEIGESSNTKDS---TFICQICIEPKTQNKSFSVKGCTHSYCSDCMAMYVGSKIQE 381
           + S+TE G+ SN+K     TF+C+ICI+PK  N SFS+KGC HSYCSDCM  YV SK+Q+
Sbjct: 103 FPSVTETGQPSNSKPDPPPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQD 162

Query: 380 NVILIGCPEPNCVGVLELEFCQSILPQNVFDRWGSALCETLIPRRQRFYCPFKDCSALLL 201
           NV  I CP PNC GVLE + C+ ILP +VFDRWG+ALCE LI   Q+FYCP+KDCSALL+
Sbjct: 163 NVSRISCPAPNCTGVLEPQQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLI 222

Query: 200 DDEGIVVRQSECPHCGRLFCAQCKVPWHSEINCKEFQRLNEGEREREDIMLMKLAKEKKW 21
            DEG V+++SECP+C RLFCAQC+VPWHS I+C EFQ+LN+ ER REDI++M LAK   W
Sbjct: 223 RDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCGEFQKLNKDERGREDILMMNLAKTNNW 282

Query: 20  QRCPKC 3
           +RCPKC
Sbjct: 283 KRCPKC 288


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  264 bits (675), Expect = 2e-68
 Identities = 113/182 (62%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
 Frame = -2

Query: 545 SITEIGESSNTK-DSTFICQICIEPKTQNKSFSVKGCTHSYCSDCMAMYVGSKIQENVIL 369
           S+ E G+SSN++ D  F+CQIC+EP     SF +KGCTH+YC++CM  YV SK+QEN+  
Sbjct: 82  SVAEKGQSSNSQIDPDFVCQICVEPTILKNSFLIKGCTHAYCTECMVKYVSSKLQENITK 141

Query: 368 IGCPEPNCVGVLELEFCQSILPQNVFDRWGSALCETLIPRRQRFYCPFKDCSALLLDDEG 189
           I CP P+C G LE E C+S+LP+NVFDRWG+ALCE +I   Q+FYCPFKDCSA+L+DD  
Sbjct: 142 ICCPVPDCKGALEPEDCRSVLPENVFDRWGNALCEAVILGSQKFYCPFKDCSAMLIDDGE 201

Query: 188 IVVRQSECPHCGRLFCAQCKVPWHSEINCKEFQRLNEGEREREDIMLMKLAKEKKWQRCP 9
            VVR+SECP+C R+FCAQCKVPWHS+I+C+E++ L++ ERER+DI+LM LAK K W+RCP
Sbjct: 202 EVVRESECPNCWRMFCAQCKVPWHSQISCEEYKMLHKDERERDDILLMNLAKNKNWRRCP 261

Query: 8   KC 3
           KC
Sbjct: 262 KC 263


>ref|XP_002516202.1| zinc finger protein, putative [Ricinus communis]
           gi|223544688|gb|EEF46204.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 400

 Score =  263 bits (671), Expect = 5e-68
 Identities = 116/182 (63%), Positives = 145/182 (79%), Gaps = 1/182 (0%)
 Frame = -2

Query: 545 SITEIGESSNTKDST-FICQICIEPKTQNKSFSVKGCTHSYCSDCMAMYVGSKIQENVIL 369
           S+TE G SS   D   F+C+IC+E KT ++S +++GCTH+YC+DCMA YV SKIQEN+  
Sbjct: 189 SVTEKGHSSEPNDHPQFVCEICVESKTADESLAIRGCTHAYCTDCMAKYVASKIQENITG 248

Query: 368 IGCPEPNCVGVLELEFCQSILPQNVFDRWGSALCETLIPRRQRFYCPFKDCSALLLDDEG 189
           I CP   C G+LE E+C+SILPQ VFDRWG+ALCE L    Q+FYCPFKDCSA+L++D G
Sbjct: 249 IYCPVSGCGGLLEPEYCRSILPQEVFDRWGNALCEALNLGSQKFYCPFKDCSAMLINDGG 308

Query: 188 IVVRQSECPHCGRLFCAQCKVPWHSEINCKEFQRLNEGEREREDIMLMKLAKEKKWQRCP 9
            V+R+SECPHC RLFCA CKVPWHS I+C +FQ L++ ERE+EDIMLMKLA+ KKW+RCP
Sbjct: 309 EVIRESECPHCRRLFCAHCKVPWHSGIDCNKFQTLHKDEREKEDIMLMKLAENKKWRRCP 368

Query: 8   KC 3
            C
Sbjct: 369 IC 370


>ref|XP_002516203.1| zinc finger protein, putative [Ricinus communis]
           gi|223544689|gb|EEF46205.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 264

 Score =  235 bits (599), Expect = 1e-59
 Identities = 104/195 (53%), Positives = 135/195 (69%)
 Frame = -2

Query: 587 DSDRGCLFIKCKYSSITEIGESSNTKDSTFICQICIEPKTQNKSFSVKGCTHSYCSDCMA 408
           + D   +F+  K        E       TFIC IC+E K  N SF++KGCTH YC DC  
Sbjct: 40  NDDYDDVFLTPKSDHTDSDEEHQENNSPTFICDICVEEKALNDSFNLKGCTHFYCIDCTV 99

Query: 407 MYVGSKIQENVILIGCPEPNCVGVLELEFCQSILPQNVFDRWGSALCETLIPRRQRFYCP 228
            YV SK+ +N+I I CP  +C G+LE E+C+ ILPQ+VFDRWG ALCE+LI   Q+FYCP
Sbjct: 100 RYVTSKLDDNLISISCPGSDCEGMLEPEYCRQILPQDVFDRWGIALCESLIDGSQKFYCP 159

Query: 227 FKDCSALLLDDEGIVVRQSECPHCGRLFCAQCKVPWHSEINCKEFQRLNEGEREREDIML 48
           FKDCS LL+DD G+ + +SECP C R FC +CKVPWHSE++CK+FQ+L   +++ +D ML
Sbjct: 160 FKDCSGLLIDDTGMEIEKSECPFCKRSFCVKCKVPWHSELSCKKFQKL---KKKGDDSML 216

Query: 47  MKLAKEKKWQRCPKC 3
           + LAK K W+RCPKC
Sbjct: 217 VDLAKRKNWRRCPKC 231