BLASTX nr result

ID: Cimicifuga21_contig00004677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004677
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vit...   281   1e-73
ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isof...   279   7e-73
ref|XP_002314599.1| predicted protein [Populus trichocarpa] gi|1...   278   1e-72
ref|XP_002322778.1| predicted protein [Populus trichocarpa] gi|1...   278   2e-72
ref|XP_004152490.1| PREDICTED: 60S ribosomal protein L27a-3-like...   277   2e-72

>ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vitis vinifera]
           gi|147783378|emb|CAN59887.1| hypothetical protein
           VITISV_026169 [Vitis vinifera]
          Length = 146

 Score =  281 bits (720), Expect = 1e-73
 Identities = 129/146 (88%), Positives = 140/146 (95%)
 Frame = -3

Query: 829 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGLHHHRILFDKYHPGYFGKVGMRY 650
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGG+HHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 649 FHRLRNKFHCPIVNIDKLWSLVPQEIKDKATPDNAPVIDVSQMGYFKVLGKGMLPPSQPV 470
           FH+LRNKF+CPIVNIDKLWS+VPQ++KDKA+PDNAP+IDV+Q GYFKVLGKG LP SQP+
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSMVPQDVKDKASPDNAPLIDVTQFGYFKVLGKGALPSSQPI 120

Query: 469 VVKAKLISKNAEKKIKAGGGAVVLTA 392
           VVKAKL+SK AEKKIK  GGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146


>ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isoform 1 [Vitis vinifera]
           gi|359491222|ref|XP_003634245.1| PREDICTED: 60S
           ribosomal protein L27a-3 isoform 2 [Vitis vinifera]
           gi|147859771|emb|CAN78902.1| hypothetical protein
           VITISV_026450 [Vitis vinifera]
          Length = 146

 Score =  279 bits (713), Expect = 7e-73
 Identities = 127/146 (86%), Positives = 140/146 (95%)
 Frame = -3

Query: 829 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGLHHHRILFDKYHPGYFGKVGMRY 650
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGG+HHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 649 FHRLRNKFHCPIVNIDKLWSLVPQEIKDKATPDNAPVIDVSQMGYFKVLGKGMLPPSQPV 470
           FH+LRNKF+CPIVNIDKLWSL+PQ++KDKA+P+NAP+IDV+Q GYFKVLGKG LP S+P+
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSLIPQDVKDKASPENAPLIDVTQFGYFKVLGKGALPESKPI 120

Query: 469 VVKAKLISKNAEKKIKAGGGAVVLTA 392
           VVKAKL+SK AEKKIK  GGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146


>ref|XP_002314599.1| predicted protein [Populus trichocarpa] gi|118481692|gb|ABK92786.1|
           unknown [Populus trichocarpa]
           gi|222863639|gb|EEF00770.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  278 bits (711), Expect = 1e-72
 Identities = 128/146 (87%), Positives = 137/146 (93%)
 Frame = -3

Query: 829 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGLHHHRILFDKYHPGYFGKVGMRY 650
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGG+HHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 649 FHRLRNKFHCPIVNIDKLWSLVPQEIKDKATPDNAPVIDVSQMGYFKVLGKGMLPPSQPV 470
           FH+LRNKFHCPIVNIDKLWS+VPQ++KDKAT D  P+IDV+Q GYFKVLGKG+LP  QP+
Sbjct: 61  FHKLRNKFHCPIVNIDKLWSMVPQDVKDKATKDTVPMIDVTQFGYFKVLGKGVLPEKQPI 120

Query: 469 VVKAKLISKNAEKKIKAGGGAVVLTA 392
           VVKAKLISK AEKKIK  GGAVVLTA
Sbjct: 121 VVKAKLISKIAEKKIKEAGGAVVLTA 146


>ref|XP_002322778.1| predicted protein [Populus trichocarpa] gi|118483220|gb|ABK93513.1|
           unknown [Populus trichocarpa]
           gi|118484573|gb|ABK94160.1| unknown [Populus
           trichocarpa] gi|222867408|gb|EEF04539.1| predicted
           protein [Populus trichocarpa]
          Length = 146

 Score =  278 bits (710), Expect = 2e-72
 Identities = 127/146 (86%), Positives = 137/146 (93%)
 Frame = -3

Query: 829 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGLHHHRILFDKYHPGYFGKVGMRY 650
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGG+HHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 649 FHRLRNKFHCPIVNIDKLWSLVPQEIKDKATPDNAPVIDVSQMGYFKVLGKGMLPPSQPV 470
           FH+LRNKFHCPIVNIDKLWS+VPQ++KDKAT D  P+IDV+Q GYFKVLGKG+LP  QP+
Sbjct: 61  FHKLRNKFHCPIVNIDKLWSMVPQDVKDKATKDTVPMIDVTQFGYFKVLGKGVLPEKQPI 120

Query: 469 VVKAKLISKNAEKKIKAGGGAVVLTA 392
           VVKAKL+SK AEKKIK  GGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146


>ref|XP_004152490.1| PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis sativus]
           gi|449487742|ref|XP_004157778.1| PREDICTED: 60S
           ribosomal protein L27a-3-like [Cucumis sativus]
          Length = 146

 Score =  277 bits (709), Expect = 2e-72
 Identities = 128/146 (87%), Positives = 139/146 (95%)
 Frame = -3

Query: 829 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGLHHHRILFDKYHPGYFGKVGMRY 650
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGG+HHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 649 FHRLRNKFHCPIVNIDKLWSLVPQEIKDKATPDNAPVIDVSQMGYFKVLGKGMLPPSQPV 470
           FH+LRNKF+CPIVN+DKLWSLVPQE+KDKA+ DN P+IDV+Q GYFKVLGKG+LP ++PV
Sbjct: 61  FHKLRNKFYCPIVNVDKLWSLVPQEVKDKASKDNVPLIDVTQFGYFKVLGKGVLPENKPV 120

Query: 469 VVKAKLISKNAEKKIKAGGGAVVLTA 392
           VVKAKLISK AEKKIK  GGAVVLTA
Sbjct: 121 VVKAKLISKIAEKKIKENGGAVVLTA 146


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