BLASTX nr result

ID: Cimicifuga21_contig00004676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004676
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300114.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15
ref|XP_002328937.1| predicted protein [Populus trichocarpa] gi|1...    85   2e-14
ref|NP_001044809.1| Os01g0849500 [Oryza sativa Japonica Group] g...    80   4e-13
ref|XP_002271031.1| PREDICTED: uncharacterized protein LOC100256...    79   1e-12
ref|NP_198912.1| uncharacterized protein [Arabidopsis thaliana] ...    77   3e-12

>ref|XP_002300114.1| predicted protein [Populus trichocarpa] gi|222847372|gb|EEE84919.1|
           predicted protein [Populus trichocarpa]
          Length = 68

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = +2

Query: 158 MKDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYG 313
           MKDWAAP+IA ALF FL+PGL+FQMPGK RP+DF+NMKTSL ++ VH VIYG
Sbjct: 1   MKDWAAPLIAAALFAFLSPGLVFQMPGKERPLDFMNMKTSLAAMFVHLVIYG 52


>ref|XP_002328937.1| predicted protein [Populus trichocarpa] gi|118483654|gb|ABK93721.1|
           unknown [Populus trichocarpa]
           gi|222839367|gb|EEE77704.1| predicted protein [Populus
           trichocarpa]
          Length = 68

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = +2

Query: 158 MKDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYG 313
           M DWAA +IA ALF FL+PGL+FQMPGK RP+DF+NMKTSL +I VH VIYG
Sbjct: 1   MNDWAASLIAAALFAFLSPGLVFQMPGKERPLDFMNMKTSLAAIFVHLVIYG 52


>ref|NP_001044809.1| Os01g0849500 [Oryza sativa Japonica Group]
           gi|113534340|dbj|BAF06723.1| Os01g0849500 [Oryza sativa
           Japonica Group] gi|125572638|gb|EAZ14153.1| hypothetical
           protein OsJ_04083 [Oryza sativa Japonica Group]
           gi|215766895|dbj|BAG99123.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218189379|gb|EEC71806.1| hypothetical protein
           OsI_04440 [Oryza sativa Indica Group]
          Length = 68

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +2

Query: 158 MKDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYG 313
           MKDWA  IIA ALF  L PG + QMPG++RPVDF+NMKTSL SI+VHAVIYG
Sbjct: 1   MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYG 52


>ref|XP_002271031.1| PREDICTED: uncharacterized protein LOC100256574 [Vitis vinifera]
           gi|296082330|emb|CBI21335.3| unnamed protein product
           [Vitis vinifera]
          Length = 68

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = +2

Query: 158 MKDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYG 313
           M+DWAA +IA ALF FL+PGL+FQ+PG+ RP DF+ MKT++ ++ VHAVIYG
Sbjct: 1   MRDWAALLIASALFAFLSPGLIFQIPGRERPADFMGMKTNIAAVFVHAVIYG 52


>ref|NP_198912.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759142|dbj|BAB09698.1| unnamed protein product
           [Arabidopsis thaliana] gi|21554020|gb|AAM63101.1|
           unknown [Arabidopsis thaliana]
           gi|88010816|gb|ABD38857.1| At5g40960 [Arabidopsis
           thaliana] gi|332007236|gb|AED94619.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 68

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 34/52 (65%), Positives = 41/52 (78%)
 Frame = +2

Query: 158 MKDWAAPIIAVALFGFLTPGLLFQMPGKHRPVDFVNMKTSLVSILVHAVIYG 313
           M DWAAP+IA ALF FL+PGL+ Q PGK  PV F+NMKT++ SI VH V+YG
Sbjct: 1   MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVHTVLYG 52


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