BLASTX nr result

ID: Cimicifuga21_contig00004666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004666
         (1741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301843.1| predicted protein [Populus trichocarpa] gi|2...   603   e-170
ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   602   e-169
gb|ABK94679.1| unknown [Populus trichocarpa]                          600   e-169
ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|2...   595   e-168
ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   588   e-165

>ref|XP_002301843.1| predicted protein [Populus trichocarpa] gi|222843569|gb|EEE81116.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  603 bits (1556), Expect = e-170
 Identities = 294/398 (73%), Positives = 339/398 (85%)
 Frame = -3

Query: 1592 MQAYSRRLGHQXXXXXXXXXXXXXLYSIPDTYNGIDHPRHITNLANRGVGHLVRKGTGGR 1413
            MQA SRRLGHQ             +Y + D + G DHPRH ++LA +GVGHL+RKGTGGR
Sbjct: 1    MQAISRRLGHQSLKPAASLSSFKSIYPLSDHHYGADHPRHASSLAAKGVGHLIRKGTGGR 60

Query: 1412 SSVSGITAAVFGATGFLGRYVVSELAKMGSQILVPFRGSEDGPRHLKPMGDLGQVVPMLY 1233
            SSVSGI A VFGATGFLGRYVV +LAKMGSQ+LVPFRGSED  RHLK MGDLGQ+VPM Y
Sbjct: 61   SSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKY 120

Query: 1232 NPRDENSIKAVMAKANVVINLIGREHETRNYSFEEVHHHMAANLAMIANEHGGIKRFIQV 1053
            NPRDENSIKAVMAKANVVINLIGR+HETRNYSFEE++H M   LAMI+ EHGGI RFIQV
Sbjct: 121  NPRDENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMISKEHGGIMRFIQV 180

Query: 1052 SCLGASPSSPSRMLRAKAAAEETIMKEFPEATIMKPAVMIGTEDRILNRWARYAKNWNFL 873
            SCLGAS SSPSRMLRAKAA EE +++E PEAT+MKPAVMIGTEDRILNRWA +AK ++FL
Sbjct: 181  SCLGASASSPSRMLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFAKKYSFL 240

Query: 872  PVIGDGSTKIQPVYVIDVAAALIGALKDDGTSMGKVYELGGPEVFTVHQLAELMYETIRE 693
            P+IGDGSTKIQPVYV+DVAAA+I ALKDDG+SMGKVYELGGPE+FTVH+LA+LM++ IRE
Sbjct: 241  PLIGDGSTKIQPVYVVDVAAAIIAALKDDGSSMGKVYELGGPEIFTVHELADLMHDVIRE 300

Query: 692  RPRYFKIPVPIVKALLSPRDYLLTRVPFPLPATELFNLDQIKAFTVDTVVSDNALTFENL 513
             PRY K+P PI KAL +PR  L+ +VPFPLPA ++FNLD+I A T+D+VVS+NALTF +L
Sbjct: 301  WPRYVKVPFPIAKALATPRAVLINKVPFPLPAPKIFNLDEINALTIDSVVSENALTFNDL 360

Query: 512  GITPRKLRGYPIEFLFSYRKGGPQFGSTVSETVSAENF 399
            GI P KL+GYPIEFL SYRKGGPQFGST+SE VS ++F
Sbjct: 361  GIVPHKLKGYPIEFLISYRKGGPQFGSTISERVSPDSF 398


>ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
            9, mitochondrial [Vitis vinifera]
            gi|297744229|emb|CBI37199.3| unnamed protein product
            [Vitis vinifera]
          Length = 399

 Score =  602 bits (1552), Expect = e-169
 Identities = 299/398 (75%), Positives = 334/398 (83%)
 Frame = -3

Query: 1592 MQAYSRRLGHQXXXXXXXXXXXXXLYSIPDTYNGIDHPRHITNLANRGVGHLVRKGTGGR 1413
            MQA SRRLGHQ             +Y + D Y G DHPR  + LA +GVGHLVRKGTGGR
Sbjct: 1    MQALSRRLGHQSFNQSPAISSLKSIYPLSDHYYGADHPRLGSTLAPKGVGHLVRKGTGGR 60

Query: 1412 SSVSGITAAVFGATGFLGRYVVSELAKMGSQILVPFRGSEDGPRHLKPMGDLGQVVPMLY 1233
            SSVSGI A VFGATGFLGRYVV +LAKMGSQ+LVPFRGSED  RHLK MGDLGQ+VPM Y
Sbjct: 61   SSVSGIVAVVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKY 120

Query: 1232 NPRDENSIKAVMAKANVVINLIGREHETRNYSFEEVHHHMAANLAMIANEHGGIKRFIQV 1053
            NPRDENSIKAVMAKANVV+NLIGRE+ETRNYSFEEV+HHMA  LAMI+ EHGGI RFIQV
Sbjct: 121  NPRDENSIKAVMAKANVVLNLIGREYETRNYSFEEVNHHMAEQLAMISKEHGGIMRFIQV 180

Query: 1052 SCLGASPSSPSRMLRAKAAAEETIMKEFPEATIMKPAVMIGTEDRILNRWARYAKNWNFL 873
            SCLGASPSSPSRML AKAAAEE +++E PEATIM+PAVMIGTEDRILNRWA++AK + FL
Sbjct: 181  SCLGASPSSPSRMLMAKAAAEEAVLRELPEATIMRPAVMIGTEDRILNRWAQFAKKYGFL 240

Query: 872  PVIGDGSTKIQPVYVIDVAAALIGALKDDGTSMGKVYELGGPEVFTVHQLAELMYETIRE 693
            P+ GDGSTK QPVYVIDVAAA++ ALKDDGTSMGKVYELGGPE+FT+H+LA +MY+TIRE
Sbjct: 241  PLYGDGSTKFQPVYVIDVAAAIMAALKDDGTSMGKVYELGGPEIFTMHELAAVMYDTIRE 300

Query: 692  RPRYFKIPVPIVKALLSPRDYLLTRVPFPLPATELFNLDQIKAFTVDTVVSDNALTFENL 513
             PRY K+P PI KA+  PR+ LL +VPFPLP   LFNLD I AFT DTVVS+NALTF++L
Sbjct: 301  WPRYVKVPFPIAKAMTLPREILLNKVPFPLPTPGLFNLDLINAFTSDTVVSENALTFDDL 360

Query: 512  GITPRKLRGYPIEFLFSYRKGGPQFGSTVSETVSAENF 399
            GI P KL+GYPIEFL SYRKGGPQFGST+SE V  E F
Sbjct: 361  GIVPHKLKGYPIEFLLSYRKGGPQFGSTISERVDPEAF 398


>gb|ABK94679.1| unknown [Populus trichocarpa]
          Length = 399

 Score =  600 bits (1547), Expect = e-169
 Identities = 293/398 (73%), Positives = 338/398 (84%)
 Frame = -3

Query: 1592 MQAYSRRLGHQXXXXXXXXXXXXXLYSIPDTYNGIDHPRHITNLANRGVGHLVRKGTGGR 1413
            MQA SRRLGHQ             +Y + D + G DHPRH ++LA +GV HL+RKGTGGR
Sbjct: 1    MQAISRRLGHQSLKPAASLSSFKSIYPLSDHHYGADHPRHASSLAAKGVCHLIRKGTGGR 60

Query: 1412 SSVSGITAAVFGATGFLGRYVVSELAKMGSQILVPFRGSEDGPRHLKPMGDLGQVVPMLY 1233
            SSVSGI A VFGATGFLGRYVV +LAKMGSQ+LVPFRGSED  RHLK MGDLGQ+VPM Y
Sbjct: 61   SSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKY 120

Query: 1232 NPRDENSIKAVMAKANVVINLIGREHETRNYSFEEVHHHMAANLAMIANEHGGIKRFIQV 1053
            NPRDENSIKAVMAKANVVINLIGR+HETRNYSFEE++H M   LAMI+ EHGGI RFIQV
Sbjct: 121  NPRDENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMISKEHGGIMRFIQV 180

Query: 1052 SCLGASPSSPSRMLRAKAAAEETIMKEFPEATIMKPAVMIGTEDRILNRWARYAKNWNFL 873
            SCLGAS SSPSRMLRAKAA EE +++E PEAT+MKPAVMIGTEDRILNRWA +AK ++FL
Sbjct: 181  SCLGASASSPSRMLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFAKKYSFL 240

Query: 872  PVIGDGSTKIQPVYVIDVAAALIGALKDDGTSMGKVYELGGPEVFTVHQLAELMYETIRE 693
            P+IGDGSTKIQPVYV+DVAAA+I ALKDDG+SMGKVYELGGPE+FTVH+LA+LM++ IRE
Sbjct: 241  PLIGDGSTKIQPVYVVDVAAAIIAALKDDGSSMGKVYELGGPEIFTVHELADLMHDVIRE 300

Query: 692  RPRYFKIPVPIVKALLSPRDYLLTRVPFPLPATELFNLDQIKAFTVDTVVSDNALTFENL 513
             PRY K+P PI KAL +PR  L+ +VPFPLPA ++FNLD+I A T+D+VVS+NALTF +L
Sbjct: 301  WPRYVKVPFPIAKALATPRAVLINKVPFPLPAPKIFNLDEINALTIDSVVSENALTFNDL 360

Query: 512  GITPRKLRGYPIEFLFSYRKGGPQFGSTVSETVSAENF 399
            GI P KL+GYPIEFL SYRKGGPQFGST+SE VS ++F
Sbjct: 361  GIVPHKLKGYPIEFLISYRKGGPQFGSTISERVSPDSF 398


>ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|222862069|gb|EEE99611.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  595 bits (1535), Expect = e-168
 Identities = 291/398 (73%), Positives = 336/398 (84%)
 Frame = -3

Query: 1592 MQAYSRRLGHQXXXXXXXXXXXXXLYSIPDTYNGIDHPRHITNLANRGVGHLVRKGTGGR 1413
            MQA SRRLGH+              Y + D   G DHPR+ + LA RGVGHL+RKGTGGR
Sbjct: 1    MQAISRRLGHRSPISSFKSI-----YPLSDHLYGADHPRYGSTLATRGVGHLIRKGTGGR 55

Query: 1412 SSVSGITAAVFGATGFLGRYVVSELAKMGSQILVPFRGSEDGPRHLKPMGDLGQVVPMLY 1233
            SSVSGI A VFGATGFLGRYVV +LAKMGSQ+LVPFRGS+D PRHLK MGDLGQ+VPM Y
Sbjct: 56   SSVSGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSDDDPRHLKLMGDLGQIVPMKY 115

Query: 1232 NPRDENSIKAVMAKANVVINLIGREHETRNYSFEEVHHHMAANLAMIANEHGGIKRFIQV 1053
            NPRDENSIKAVMAKANVVINLIGR++ETRNYSFEE++H MA  LAMI+ EHGGI RFIQV
Sbjct: 116  NPRDENSIKAVMAKANVVINLIGRDYETRNYSFEELNHAMAGQLAMISKEHGGIMRFIQV 175

Query: 1052 SCLGASPSSPSRMLRAKAAAEETIMKEFPEATIMKPAVMIGTEDRILNRWARYAKNWNFL 873
            SCLGAS SSPSR+LRAKAA EE +++E PEAT+MKPAVMIGTEDRILNRWA + K ++FL
Sbjct: 176  SCLGASASSPSRLLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFTKKYSFL 235

Query: 872  PVIGDGSTKIQPVYVIDVAAALIGALKDDGTSMGKVYELGGPEVFTVHQLAELMYETIRE 693
            P+IGDGSTKIQPVYV+D+AAA+I ALKDDGTSMGKVYELGGPE+FTVH+LAELMY+ IRE
Sbjct: 236  PLIGDGSTKIQPVYVVDIAAAIIAALKDDGTSMGKVYELGGPEIFTVHELAELMYDVIRE 295

Query: 692  RPRYFKIPVPIVKALLSPRDYLLTRVPFPLPATELFNLDQIKAFTVDTVVSDNALTFENL 513
             PRY K+P PI KA  +PR+ LL +VPFPLP  ++FNLD+I + T+DTVVS+NALTF +L
Sbjct: 296  WPRYVKVPFPIAKAFATPREILLNKVPFPLPNPKMFNLDEINSLTMDTVVSENALTFSDL 355

Query: 512  GITPRKLRGYPIEFLFSYRKGGPQFGSTVSETVSAENF 399
            GI P KL+GYP+EFL SYRKGGPQFGST+SE VS ++F
Sbjct: 356  GIVPHKLKGYPVEFLISYRKGGPQFGSTISERVSPDSF 393


>ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
            9, mitochondrial-like [Glycine max]
          Length = 396

 Score =  588 bits (1516), Expect = e-165
 Identities = 289/398 (72%), Positives = 334/398 (83%)
 Frame = -3

Query: 1592 MQAYSRRLGHQXXXXXXXXXXXXXLYSIPDTYNGIDHPRHITNLANRGVGHLVRKGTGGR 1413
            MQ  +RRLG Q              Y I D + G+DH R+++ LA +GVGHLVRKGTGGR
Sbjct: 1    MQTIARRLGQQSLRPSTSLKSI---YPISDHHYGMDHERYVSTLATKGVGHLVRKGTGGR 57

Query: 1412 SSVSGITAAVFGATGFLGRYVVSELAKMGSQILVPFRGSEDGPRHLKPMGDLGQVVPMLY 1233
            SSVSGI A VFGATGFLGRYVV +LAKMGSQ+LVPFRGSED PRHLK MGDLGQ+VPM Y
Sbjct: 58   SSVSGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKY 117

Query: 1232 NPRDENSIKAVMAKANVVINLIGREHETRNYSFEEVHHHMAANLAMIANEHGGIKRFIQV 1053
            NPRDE+S+KAVMAKANVVINLIGR++ETRNYSFEEVH+HMA  LA I+ EHGGI RFIQV
Sbjct: 118  NPRDESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQV 177

Query: 1052 SCLGASPSSPSRMLRAKAAAEETIMKEFPEATIMKPAVMIGTEDRILNRWARYAKNWNFL 873
            SCLGASPSSPSRMLR K+AAEE I++E PEATI+KPAVMIGTEDRILN WA +AK + FL
Sbjct: 178  SCLGASPSSPSRMLRTKSAAEEMILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFL 237

Query: 872  PVIGDGSTKIQPVYVIDVAAALIGALKDDGTSMGKVYELGGPEVFTVHQLAELMYETIRE 693
            P+ GDGSTKIQPVYVIDVAAAL   LKDDGTSMGK+YELGGPE+FTVH+LA++M++TIRE
Sbjct: 238  PLFGDGSTKIQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVMFDTIRE 297

Query: 692  RPRYFKIPVPIVKALLSPRDYLLTRVPFPLPATELFNLDQIKAFTVDTVVSDNALTFENL 513
             PRY K+P PI KAL +PR+ LL +VPFPLP  E+ NLD+I+A T DTVVS+NALTF +L
Sbjct: 298  WPRYVKVPFPIAKALATPREILLNKVPFPLPVPEILNLDKIQALTTDTVVSENALTFNDL 357

Query: 512  GITPRKLRGYPIEFLFSYRKGGPQFGSTVSETVSAENF 399
            GI P KL+GYPIEFL SYRKGGPQFGST+SE V+ +++
Sbjct: 358  GIVPHKLKGYPIEFLISYRKGGPQFGSTISERVTPDSW 395


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