BLASTX nr result

ID: Cimicifuga21_contig00004635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004635
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32591.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [V...   149   2e-34
gb|AFK37660.1| unknown [Lotus japonicus]                              135   3e-30
gb|AFK36091.1| unknown [Lotus japonicus]                              135   3e-30
ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatu...   134   6e-30

>emb|CBI32591.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  149 bits (376), Expect = 2e-34
 Identities = 80/126 (63%), Positives = 85/126 (67%), Gaps = 9/126 (7%)
 Frame = -3

Query: 443 KKTAGSTKKGRDSKPKYLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 264
           KKTAGSTK GRDSKPK LGVKKFGGERVIPGNIIVRQRGT                    
Sbjct: 34  KKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGT-------------------- 73

Query: 263 XXXXRFHPGNYVGIGKDHTLYAMKEGCVKFEHHKLSGK---------GMVVHPIYANLAV 111
               RFHPGNYVGIGKDHTLYA+KEGCVKFE HKLSG+         G V+HP+YA+ A 
Sbjct: 74  ----RFHPGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWVHVEPKDGHVLHPVYADAAA 129

Query: 110 SELKTT 93
             LKTT
Sbjct: 130 PRLKTT 135


>ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [Vitis vinifera]
          Length = 146

 Score =  149 bits (376), Expect = 2e-34
 Identities = 80/126 (63%), Positives = 85/126 (67%), Gaps = 9/126 (7%)
 Frame = -3

Query: 443 KKTAGSTKKGRDSKPKYLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 264
           KKTAGSTK GRDSKPK LGVKKFGGERVIPGNIIVRQRGT                    
Sbjct: 44  KKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGT-------------------- 83

Query: 263 XXXXRFHPGNYVGIGKDHTLYAMKEGCVKFEHHKLSGK---------GMVVHPIYANLAV 111
               RFHPGNYVGIGKDHTLYA+KEGCVKFE HKLSG+         G V+HP+YA+ A 
Sbjct: 84  ----RFHPGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWVHVEPKDGHVLHPVYADAAA 139

Query: 110 SELKTT 93
             LKTT
Sbjct: 140 PRLKTT 145


>gb|AFK37660.1| unknown [Lotus japonicus]
          Length = 146

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/124 (58%), Positives = 83/124 (66%), Gaps = 9/124 (7%)
 Frame = -3

Query: 443 KKTAGSTKKGRDSKPKYLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 264
           KKTAGSTK GRDSKPK LGVKKFGGERVIPGNIIVRQRGT                    
Sbjct: 44  KKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGT-------------------- 83

Query: 263 XXXXRFHPGNYVGIGKDHTLYAMKEGCVKFEHHKLSGK---------GMVVHPIYANLAV 111
               RFHPGNYVGIGKDHTL+A+K+G VKFE +KL+G+         G V+HP+Y + + 
Sbjct: 84  ----RFHPGNYVGIGKDHTLFALKQGLVKFERNKLTGRKWVHVEPKEGHVLHPVYESASE 139

Query: 110 SELK 99
           SELK
Sbjct: 140 SELK 143


>gb|AFK36091.1| unknown [Lotus japonicus]
          Length = 181

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/124 (58%), Positives = 83/124 (66%), Gaps = 9/124 (7%)
 Frame = -3

Query: 443 KKTAGSTKKGRDSKPKYLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 264
           KKTAGSTK GRDSKPK LGVKKFGGERVIPGNIIVRQRGT                    
Sbjct: 79  KKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGT-------------------- 118

Query: 263 XXXXRFHPGNYVGIGKDHTLYAMKEGCVKFEHHKLSGK---------GMVVHPIYANLAV 111
               RFHPGNYVGIGKDHTL+A+K+G VKFE +KL+G+         G V+HP+Y + + 
Sbjct: 119 ----RFHPGNYVGIGKDHTLFALKQGLVKFERNKLTGRKWVHVEPKEGHVLHPVYESASE 174

Query: 110 SELK 99
           SELK
Sbjct: 175 SELK 178


>ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatula]
           gi|217071060|gb|ACJ83890.1| unknown [Medicago
           truncatula] gi|355487511|gb|AES68714.1| 50S ribosomal
           protein L27 [Medicago truncatula]
           gi|388495594|gb|AFK35863.1| unknown [Medicago
           truncatula] gi|388500166|gb|AFK38149.1| unknown
           [Medicago truncatula]
          Length = 148

 Score =  134 bits (338), Expect = 6e-30
 Identities = 72/124 (58%), Positives = 84/124 (67%), Gaps = 9/124 (7%)
 Frame = -3

Query: 443 KKTAGSTKKGRDSKPKYLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 264
           KKTAGSTK GRDSKPK LGVKKFGGERVIPGNIIVRQRGT                    
Sbjct: 44  KKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGT-------------------- 83

Query: 263 XXXXRFHPGNYVGIGKDHTLYAMKEGCVKFEHHKLSGK---------GMVVHPIYANLAV 111
               RFHPGNYVG+GKDHTL+A+KEG VKFE +KL+G+         G V+HP++A+++ 
Sbjct: 84  ----RFHPGNYVGLGKDHTLFALKEGWVKFERNKLTGRKWVHVEPKEGHVLHPVFADVSA 139

Query: 110 SELK 99
           SE K
Sbjct: 140 SEPK 143


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