BLASTX nr result

ID: Cimicifuga21_contig00004630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004630
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinif...   117   7e-25
emb|CBI38092.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002524004.1| signal transducer, putative [Ricinus communi...   104   6e-21
ref|XP_002882297.1| hypothetical protein ARALYDRAFT_477602 [Arab...    99   3e-19

>ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinifera]
          Length = 638

 Score =  117 bits (294), Expect = 7e-25
 Identities = 69/149 (46%), Positives = 86/149 (57%)
 Frame = +3

Query: 15  GAEQGEPAAILLSPSSPFPAIGASVDSTRHPSGSQFTMFLTAPLQAFCLLLGLSGSNIEI 194
           G+E+GEPAA+LLSPSS  P + A+VD++RHP+GS FT+FLTAPLQAFCLLLG SGS++E+
Sbjct: 456 GSEKGEPAALLLSPSSLSPPV-AAVDTSRHPTGSLFTIFLTAPLQAFCLLLGFSGSDVEM 514

Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEKXXXXXXNEWGLTLATSNSLDPV 374
                                             KAEK      N+WGLTLATS++LDP 
Sbjct: 515 ------------------------------DLYSKAEKLLSSSLNDWGLTLATSDTLDPA 544

Query: 375 FAQILCDPXXXXXXXXXXXXXAVIAHYAP 461
           +AQIL DP             AV+  YAP
Sbjct: 545 WAQILSDPFLRRILLRFIFCRAVLTLYAP 573


>emb|CBI38092.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  116 bits (290), Expect = 2e-24
 Identities = 66/130 (50%), Positives = 82/130 (63%)
 Frame = +3

Query: 9   IHGAEQGEPAAILLSPSSPFPAIGASVDSTRHPSGSQFTMFLTAPLQAFCLLLGLSGSNI 188
           I+GAE+GEPAA+LLSPSS  P + A+VD++RHP+GS FT+FLTAPLQAFCLLLG SGS++
Sbjct: 463 INGAEKGEPAALLLSPSSLSPPV-AAVDTSRHPTGSLFTIFLTAPLQAFCLLLGFSGSDV 521

Query: 189 EIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEKXXXXXXNEWGLTLATSNSLD 368
           E+                                  KAEK      N+WGLTLATS++LD
Sbjct: 522 EM------------------------------DLYSKAEKLLSSSLNDWGLTLATSDTLD 551

Query: 369 PVFAQILCDP 398
           P +AQIL DP
Sbjct: 552 PAWAQILSDP 561


>ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|222858136|gb|EEE95683.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  109 bits (272), Expect = 3e-22
 Identities = 69/152 (45%), Positives = 80/152 (52%)
 Frame = +3

Query: 6   AIHGAEQGEPAAILLSPSSPFPAIGASVDSTRHPSGSQFTMFLTAPLQAFCLLLGLSGSN 185
           AI GAE+GEPAAI+LSPS   P   A  DS+RH SGS  TMFLT PLQAFCLL+GLSG +
Sbjct: 411 AISGAEKGEPAAIILSPSCSIPLTTA--DSSRHHSGSLLTMFLTTPLQAFCLLIGLSGPD 468

Query: 186 IEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEKXXXXXXNEWGLTLATSNSL 365
           +E+                                  KAEK      N WGLTLATS+ L
Sbjct: 469 VEM------------------------------DTYNKAEKLLSSSLNAWGLTLATSDML 498

Query: 366 DPVFAQILCDPXXXXXXXXXXXXXAVIAHYAP 461
           DPV+AQIL DP             AV+  +AP
Sbjct: 499 DPVWAQILGDPFLRRLLLRFLFCRAVLTLFAP 530


>ref|XP_002524004.1| signal transducer, putative [Ricinus communis]
           gi|223536731|gb|EEF38372.1| signal transducer, putative
           [Ricinus communis]
          Length = 761

 Score =  104 bits (260), Expect = 6e-21
 Identities = 66/153 (43%), Positives = 81/153 (52%)
 Frame = +3

Query: 3   KAIHGAEQGEPAAILLSPSSPFPAIGASVDSTRHPSGSQFTMFLTAPLQAFCLLLGLSGS 182
           KA  G+E+GEPAAILLSPS   P    +V+S+RH SGS FT+FLT PLQAFCLL+GLSGS
Sbjct: 440 KASVGSEKGEPAAILLSPSCSTPL--TAVESSRHQSGSLFTLFLTTPLQAFCLLIGLSGS 497

Query: 183 NIEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEKXXXXXXNEWGLTLATSNS 362
           +IE+                                  KAE       N+WG  LATS++
Sbjct: 498 DIEM------------------------------DTYNKAEALLSSSLNDWGSALATSDT 527

Query: 363 LDPVFAQILCDPXXXXXXXXXXXXXAVIAHYAP 461
           LDPV+AQIL DP             AV+  + P
Sbjct: 528 LDPVWAQILGDPFLRRLLVRFLFCRAVLTLFGP 560


>ref|XP_002882297.1| hypothetical protein ARALYDRAFT_477602 [Arabidopsis lyrata subsp.
           lyrata] gi|297328137|gb|EFH58556.1| hypothetical protein
           ARALYDRAFT_477602 [Arabidopsis lyrata subsp. lyrata]
          Length = 606

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 65/153 (42%), Positives = 79/153 (51%)
 Frame = +3

Query: 3   KAIHGAEQGEPAAILLSPSSPFPAIGASVDSTRHPSGSQFTMFLTAPLQAFCLLLGLSGS 182
           K I GAE+GEPAA+LLSPS   P I A  D +R PSGS FT+FLT+P+QAFCLL G+S S
Sbjct: 431 KNICGAEKGEPAALLLSPSHTPPLISA--DFSRQPSGSLFTIFLTSPVQAFCLLSGISAS 488

Query: 183 NIEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEKXXXXXXNEWGLTLATSNS 362
           ++E                                   KAEK      NEW  TLATS++
Sbjct: 489 DME------------------------------TDILTKAEKLLSSFMNEWASTLATSDT 518

Query: 363 LDPVFAQILCDPXXXXXXXXXXXXXAVIAHYAP 461
           L PV++QIL DP             AV+A Y P
Sbjct: 519 LHPVWSQILKDPFLRRLLLRFIFCRAVLALYTP 551


Top