BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004611
         (1222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]               291   3e-76
ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|2...   286   7e-75
ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycin...   282   1e-73
gb|AFK38999.1| unknown [Medicago truncatula]                          280   4e-73
ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medica...   279   9e-73

>gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
          Length = 231

 Score =  291 bits (744), Expect = 3e-76
 Identities = 155/232 (66%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = +2

Query: 92  MLSGDVPPNQTIYIXXXXXXXXXXXXXRSLYALFSQYGRILDVVALKTAKLRGQAWVVFS 271
           ML+GD+PPNQTIYI             RSLY LFSQYGRI+D+VALKT KLRGQ+WVVFS
Sbjct: 2   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRIVDIVALKTPKLRGQSWVVFS 61

Query: 272 EVTAASNAVRQMQSFPFYEKPMRIQYAKTKSDCVAKAEGTF--VXXXXXXXXXXXXXXXX 445
           EVTAASNAVRQMQ+FPFY+KPMRIQYAK+KSDC+AKAEGT+                   
Sbjct: 62  EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDCIAKAEGTYDKKKKQDEKVEKRKRTEET 121

Query: 446 XXXXXXXXXXTQSNGAPAASHHRQGKSGAQEAAAAPNSILFIQNLPHETTSHMLQLLFEQ 625
                     T SNG PAA+  RQGK  AQ+  A PN+ILFIQNLPHETTS ML++LF+Q
Sbjct: 122 PQTGAANGPRTDSNGGPAAA-SRQGKPSAQD-VAEPNNILFIQNLPHETTSMMLEVLFKQ 179

Query: 626 YPGFKEVRMIEAKPGIAFVEYADDEHSSVAMQALQGFKITPQSPMTITYAKK 781
           YPGF+EVRMIEAKPGIAFVE+ DD  SSVAMQALQGFKITPQ+PM ITYAKK
Sbjct: 180 YPGFREVRMIEAKPGIAFVEFDDDVQSSVAMQALQGFKITPQNPMAITYAKK 231


>ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|222862970|gb|EEF00477.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  286 bits (732), Expect = 7e-75
 Identities = 154/235 (65%), Positives = 170/235 (72%), Gaps = 5/235 (2%)
 Frame = +2

Query: 92  MLSGDVPPNQTIYIXXXXXXXXXXXXXRSLYALFSQYGRILDVVALKTAKLRGQAWVVFS 271
           ML+GD+PPNQTIYI             RSLY LFSQYGRILDVVALKTA+LRGQAWVVFS
Sbjct: 1   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTARLRGQAWVVFS 60

Query: 272 EVTAASNAVRQMQSFPFYEKPMRIQYAKTKSDCVAKAEGTFVXXXXXXXXXXXXXXXXXX 451
           EVTAASNAVRQMQ FPFY+KPMRIQYAKTKSDC+A+AEG +                   
Sbjct: 61  EVTAASNAVRQMQGFPFYDKPMRIQYAKTKSDCIAEAEGVY-DPNAKKKKKQEEKAERKK 119

Query: 452 XXXXXXXXTQSNGAPAASH-----HRQGKSGAQEAAAAPNSILFIQNLPHETTSHMLQLL 616
                     +NG PA S+      RQG   AQE    PN+ILFIQNLPHETTS MLQ+L
Sbjct: 120 RAEEAQQSAPANGKPAESNGGPTSFRQGNQSAQE-TVPPNNILFIQNLPHETTSMMLQVL 178

Query: 617 FEQYPGFKEVRMIEAKPGIAFVEYADDEHSSVAMQALQGFKITPQSPMTITYAKK 781
           F+QYPGF+EVRMIEAKPGIAFVE+ DD  SS+AMQALQGFKITPQ+PM ITYAKK
Sbjct: 179 FQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKITPQNPMAITYAKK 233


>ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
           gi|255647802|gb|ACU24361.1| unknown [Glycine max]
          Length = 232

 Score =  282 bits (722), Expect = 1e-73
 Identities = 153/235 (65%), Positives = 171/235 (72%), Gaps = 5/235 (2%)
 Frame = +2

Query: 92  MLSGDVPPNQTIYIXXXXXXXXXXXXXRSLYALFSQYGRILDVVALKTAKLRGQAWVVFS 271
           MLSGD+PPNQTIYI             RSLY LFSQYGRILDV+ALKT KLRGQAWV FS
Sbjct: 1   MLSGDIPPNQTIYIKNINEKVKKDELKRSLYCLFSQYGRILDVIALKTPKLRGQAWVCFS 60

Query: 272 EVTAASNAVRQMQSFPFYEKPMRIQYAKTKSDCVAKAEGTFV-----XXXXXXXXXXXXX 436
           EVTAASNAVRQMQ+FPFY+KPMRIQYAKTKSDC+AK EGT+V                  
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKEEGTYVPREKKKKQEEKAERKRRA 120

Query: 437 XXXXXXXXXXXXXTQSNGAPAASHHRQGKSGAQEAAAAPNSILFIQNLPHETTSHMLQLL 616
                        + SNG P AS  RQG  GAQE  AAPN+ILFI+NLPHETT  ML++L
Sbjct: 121 EEAQQSGVANGTHSASNGGPTAS-FRQG-PGAQE-TAAPNNILFIENLPHETTGRMLEML 177

Query: 617 FEQYPGFKEVRMIEAKPGIAFVEYADDEHSSVAMQALQGFKITPQSPMTITYAKK 781
           FEQYPGFKEVR+IEAKPGIAFV++ D+  SS+AMQAL GFKITPQ+PM IT+AKK
Sbjct: 178 FEQYPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFAKK 232


>gb|AFK38999.1| unknown [Medicago truncatula]
          Length = 234

 Score =  280 bits (717), Expect = 4e-73
 Identities = 151/236 (63%), Positives = 169/236 (71%), Gaps = 6/236 (2%)
 Frame = +2

Query: 92  MLSGDVPPNQTIYIXXXXXXXXXXXXXRSLYALFSQYGRILDVVALKTAKLRGQAWVVFS 271
           MLSGD+PPNQTIYI             RSLY LFSQYGRILD++ALKT KLRGQAWV FS
Sbjct: 1   MLSGDIPPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFS 60

Query: 272 EVTAASNAVRQMQSFPFYEKPMRIQYAKTKSDCVAKAEGTFVXXXXXXXXXXXXXXXXXX 451
           EVTAASNAVRQMQ+FPFYEKPMRIQYAKTKSDC+AK EG+FV                  
Sbjct: 61  EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKKYA 120

Query: 452 XXXXXXXXTQ------SNGAPAASHHRQGKSGAQEAAAAPNSILFIQNLPHETTSHMLQL 613
                           SNG    +  R G SGAQE AAAPN+ILFI+NLP+ETT  ML++
Sbjct: 121 DESKQSAVPNGGTHGASNGGSTQASFRPG-SGAQE-AAAPNNILFIENLPYETTGRMLEM 178

Query: 614 LFEQYPGFKEVRMIEAKPGIAFVEYADDEHSSVAMQALQGFKITPQSPMTITYAKK 781
           LFEQYPGFKEVR+IEAKPGIAFV++ DD  SS+AMQALQGFKITPQ+PM I +AKK
Sbjct: 179 LFEQYPGFKEVRLIEAKPGIAFVDFEDDGQSSMAMQALQGFKITPQNPMIINFAKK 234


>ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
           gi|355517286|gb|AES98909.1| U1 small nuclear
           ribonucleoprotein A [Medicago truncatula]
           gi|388501104|gb|AFK38618.1| unknown [Medicago
           truncatula]
          Length = 233

 Score =  279 bits (714), Expect = 9e-73
 Identities = 153/236 (64%), Positives = 170/236 (72%), Gaps = 6/236 (2%)
 Frame = +2

Query: 92  MLSGDVPPNQTIYIXXXXXXXXXXXXXRSLYALFSQYGRILDVVALKTAKLRGQAWVVFS 271
           MLSGD+PPNQTIYI             RSLY LFSQYGRILD++ALKT KLRGQAWV FS
Sbjct: 1   MLSGDIPPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFS 60

Query: 272 EVTAASNAVRQMQSFPFYEKPMRIQYAKTKSDCVAKAEGTFVXXXXXXXXXXXXXXXXXX 451
           EVTAASNAVRQMQ+FPFYEKPMRIQYAKTKSDC+AK EG+FV                  
Sbjct: 61  EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKKYA 120

Query: 452 XXXXXXXXTQ------SNGAPAASHHRQGKSGAQEAAAAPNSILFIQNLPHETTSHMLQL 613
                           SNG   AS  R G SGAQE AAAPN+ILFI+NLP+ETT  ML++
Sbjct: 121 DESKQSAVPNGGTHGASNGGSTAS-FRPG-SGAQE-AAAPNNILFIENLPYETTGRMLEM 177

Query: 614 LFEQYPGFKEVRMIEAKPGIAFVEYADDEHSSVAMQALQGFKITPQSPMTITYAKK 781
           LFEQYPGFKEVR+IEAKPGIAFV++ DD  SS+AMQALQGFKITPQ+PM I +AKK
Sbjct: 178 LFEQYPGFKEVRLIEAKPGIAFVDFEDDGQSSMAMQALQGFKITPQNPMIINFAKK 233