BLASTX nr result

ID: Cimicifuga21_contig00004562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004562
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284935.1| PREDICTED: uncharacterized protein LOC100255...   218   1e-54
ref|XP_002514753.1| conserved hypothetical protein [Ricinus comm...   183   5e-44
ref|XP_004154974.1| PREDICTED: uncharacterized protein LOC101228...   179   9e-43
ref|NP_201050.2| uncharacterized protein [Arabidopsis thaliana] ...   179   9e-43
ref|XP_002866491.1| hypothetical protein ARALYDRAFT_496421 [Arab...   179   9e-43

>ref|XP_002284935.1| PREDICTED: uncharacterized protein LOC100255290 [Vitis vinifera]
          Length = 235

 Score =  218 bits (556), Expect = 1e-54
 Identities = 117/218 (53%), Positives = 144/218 (66%), Gaps = 7/218 (3%)
 Frame = +3

Query: 42  LAMAEVAEIPQNIQDGEKTSTEDQMELEAPETLQNSASEQ-----NGDA--KRAREDETN 200
           +A   V+E P+ + + E  +T+D M++EAPE  Q + S+      NGD+  KR RE+   
Sbjct: 1   MAETVVSETPETVTERETANTQD-MDVEAPEPSQPNGSDSADNVTNGDSNSKRGREEAGE 59

Query: 201 GADVENDAXXXXXXXXXXXXXXRLDGLQXXXXXXXXXXXXXXXXXXVSLGPKNFGSSVEM 380
           G D  NDA              RL+ L+                   SLGPK FGSSVEM
Sbjct: 60  GEDA-NDAVTKKQKVEKSVEEERLEKLEAEVVETGRF----------SLGPKTFGSSVEM 108

Query: 381 FDYFFKFVHFWPMNVDINKYEHMVLLDLLKKGHTEPDEKIGAGVRAFQVRNHPMWKSRCF 560
           FD+FFKF+H+WP N+D+NKYEHM+LLDLLKKGHTEPD+KIG G+ AFQVR HP++KSRCF
Sbjct: 109 FDHFFKFLHYWPANLDVNKYEHMMLLDLLKKGHTEPDKKIGGGIHAFQVRYHPVFKSRCF 168

Query: 561 FIIREDESVDDFSFRKCVDSILPLPEKMKAHSHANKAL 674
           F+IR+DESVDDFSFRKCVD I PLPE MKA S  NKAL
Sbjct: 169 FVIRDDESVDDFSFRKCVDHISPLPENMKAKSEVNKAL 206


>ref|XP_002514753.1| conserved hypothetical protein [Ricinus communis]
           gi|223546357|gb|EEF47859.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 224

 Score =  183 bits (465), Expect = 5e-44
 Identities = 79/109 (72%), Positives = 97/109 (88%)
 Frame = +3

Query: 339 VSLGPKNFGSSVEMFDYFFKFVHFWPMNVDINKYEHMVLLDLLKKGHTEPDEKIGAGVRA 518
           VSLGPK+FGSSVEMFDYF+  +H+WP N+ +NKYEHMVLL+LLKKGH++P++KIG G++A
Sbjct: 83  VSLGPKSFGSSVEMFDYFYNLLHYWPPNLTVNKYEHMVLLELLKKGHSDPEKKIGGGIQA 142

Query: 519 FQVRNHPMWKSRCFFIIREDESVDDFSFRKCVDSILPLPEKMKAHSHAN 665
           FQVR HPMWKSRCFF+IR+D+++DDFSFRKCVD ILPLPE MK  S  N
Sbjct: 143 FQVRYHPMWKSRCFFLIRDDDTMDDFSFRKCVDKILPLPEDMKIKSDGN 191


>ref|XP_004154974.1| PREDICTED: uncharacterized protein LOC101228008 [Cucumis sativus]
          Length = 232

 Score =  179 bits (454), Expect = 9e-43
 Identities = 100/211 (47%), Positives = 126/211 (59%), Gaps = 8/211 (3%)
 Frame = +3

Query: 66  IPQNIQDGEKTSTEDQMELEAPETLQNSASEQ--------NGDAKRAREDETNGADVEND 221
           IPQ   +   + TED MELE  E   ++ + +        NGDA   RE E +  D   D
Sbjct: 6   IPQLDPEVTNSGTED-MELETTEPKASTDASEANEAAPVINGDATSKREREESADDGVAD 64

Query: 222 AXXXXXXXXXXXXXXRLDGLQXXXXXXXXXXXXXXXXXXVSLGPKNFGSSVEMFDYFFKF 401
                          RL+ L                   VSLGPK+F SSVE+FDYF+K 
Sbjct: 65  GKKQKIEKSVEEE--RLEKL-------GGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKI 115

Query: 402 VHFWPMNVDINKYEHMVLLDLLKKGHTEPDEKIGAGVRAFQVRNHPMWKSRCFFIIREDE 581
           +H WP+N+++N+YE MVL+DLLKKGH EP++KIG G+ +FQ+R HP WKS+CFF+IREDE
Sbjct: 116 LHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDE 175

Query: 582 SVDDFSFRKCVDSILPLPEKMKAHSHANKAL 674
           S DDFSFRKCVD ILPLPE  K    AN+AL
Sbjct: 176 SADDFSFRKCVDHILPLPENFKGKFDANRAL 206


>ref|NP_201050.2| uncharacterized protein [Arabidopsis thaliana]
           gi|20385491|gb|AAM21312.1|AF371327_1 EMB514 [Arabidopsis
           thaliana] gi|21593438|gb|AAM65405.1| unknown
           [Arabidopsis thaliana] gi|30793885|gb|AAP40395.1|
           unknown protein [Arabidopsis thaliana]
           gi|30794104|gb|AAP40494.1| unknown protein [Arabidopsis
           thaliana] gi|51968752|dbj|BAD43068.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|110739286|dbj|BAF01556.1| hypothetical protein
           [Arabidopsis thaliana] gi|332010225|gb|AED97608.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 202

 Score =  179 bits (454), Expect = 9e-43
 Identities = 76/103 (73%), Positives = 91/103 (88%)
 Frame = +3

Query: 339 VSLGPKNFGSSVEMFDYFFKFVHFWPMNVDINKYEHMVLLDLLKKGHTEPDEKIGAGVRA 518
           V LGPK F +SV MFDYF KF+HFWP ++D+NKYEHMVLLDL+KKGH+EP++KIG G++ 
Sbjct: 67  VKLGPKEFVTSVAMFDYFVKFLHFWPTDLDVNKYEHMVLLDLIKKGHSEPEKKIGGGIKT 126

Query: 519 FQVRNHPMWKSRCFFIIREDESVDDFSFRKCVDSILPLPEKMK 647
           FQVR HPMWKSRCFF++RED++ DDFSFRKCVD ILPLPE MK
Sbjct: 127 FQVRTHPMWKSRCFFLVREDDTADDFSFRKCVDQILPLPENMK 169


>ref|XP_002866491.1| hypothetical protein ARALYDRAFT_496421 [Arabidopsis lyrata subsp.
           lyrata] gi|297312326|gb|EFH42750.1| hypothetical protein
           ARALYDRAFT_496421 [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score =  179 bits (454), Expect = 9e-43
 Identities = 76/104 (73%), Positives = 92/104 (88%)
 Frame = +3

Query: 339 VSLGPKNFGSSVEMFDYFFKFVHFWPMNVDINKYEHMVLLDLLKKGHTEPDEKIGAGVRA 518
           V LGPK F +SV MFDYF KF+HFWP ++D+NKYEHMVLLDL+KKGH+EP++KIG G++ 
Sbjct: 67  VKLGPKEFVTSVAMFDYFVKFLHFWPTDLDVNKYEHMVLLDLIKKGHSEPEKKIGGGIKT 126

Query: 519 FQVRNHPMWKSRCFFIIREDESVDDFSFRKCVDSILPLPEKMKA 650
           FQVR HPMWKSRCFF++RED++ DDFSFRKCVD ILPLPE MK+
Sbjct: 127 FQVRTHPMWKSRCFFLVREDDTADDFSFRKCVDHILPLPENMKS 170


Top