BLASTX nr result

ID: Cimicifuga21_contig00004561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004561
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca...   147   2e-33
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...   141   1e-31
emb|CBI36394.3| unnamed protein product [Vitis vinifera]              140   3e-31
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]   137   1e-30
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...   136   4e-30

>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 906

 Score =  147 bits (370), Expect = 2e-33
 Identities = 91/220 (41%), Positives = 126/220 (57%), Gaps = 7/220 (3%)
 Frame = +1

Query: 25   DMNGQEFSYIH--GRHLSASNLENSS---IYEQKNIRTLRPFHRDRDLDREVLWNRTXXX 189
            + N  E + +H   RH++ +  E      I+  KN+RTL+   +D          +T   
Sbjct: 518  EKNVLEMASLHTKARHMTLTGREKQFHPIIFNLKNLRTLQVLQKDV---------KTAPP 568

Query: 190  XXXXXXXXXXXXXXADGDLEELPVEVDKLLHLRYLDLSHTELKELPETMCNLLNLQTLKL 369
                          +   +  LP  V +L HLR+L+LS      LP+T+C L NL  LKL
Sbjct: 569  DLFHGLQCLRGLDLSHTSITGLPSAVGRLFHLRWLNLSGLNFVVLPDTICKLYNLLALKL 628

Query: 370  NGCRSLSKLPQEIGKLDNLRHLEIGGTDALHYLPQSIGRLCSLRTLSKFIAG--GEGCSI 543
            +GCR L +LP+ +GKL NLR+L I  T++L  LPQ IGRL +LRTLSKF  G   EGC++
Sbjct: 629  HGCRRLHRLPRGLGKLINLRYLNIEETESLSVLPQGIGRLSNLRTLSKFCIGENREGCNV 688

Query: 544  EELKLLNHLEGRLEITVMEQVADVNKVEHAELKQKKNLRS 663
             ELK LNHL G LEI+ +E+V +VN+V  A LK K++LRS
Sbjct: 689  GELKNLNHLRGHLEISGLEKVRNVNEVMEANLKNKEHLRS 728


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 923

 Score =  141 bits (355), Expect = 1e-31
 Identities = 76/143 (53%), Positives = 100/143 (69%), Gaps = 4/143 (2%)
 Frame = +1

Query: 244  LEELPVEVDKLLHLRYLDLSHTE-LKELPETMCNLLNLQTLKLNGCRSLSKLPQEIGKLD 420
            +EELP EV KL+HLRYL+LS+ + L+ELPET+C+L NLQTL +  C  L KLPQ +GKL 
Sbjct: 590  IEELPKEVGKLIHLRYLNLSYCDSLRELPETICDLYNLQTLNIQACSRLQKLPQAMGKLI 649

Query: 421  NLRHLEIGGTDALHYLPQSIGRLCSLRTLSKFIA---GGEGCSIEELKLLNHLEGRLEIT 591
            NLRHLE    D L  LP+ IGRL SL+TL  FI    G + C IE+L+ LN+L GRL I 
Sbjct: 650  NLRHLENYDADDLQGLPKGIGRLSSLQTLDVFIVSSHGNDECQIEDLRNLNNLRGRLSIQ 709

Query: 592  VMEQVADVNKVEHAELKQKKNLR 660
             +++V D  + E AEL+ + +L+
Sbjct: 710  GLDEVKDAGEAEKAELQNRVHLQ 732


>emb|CBI36394.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  140 bits (352), Expect = 3e-31
 Identities = 78/143 (54%), Positives = 97/143 (67%), Gaps = 4/143 (2%)
 Frame = +1

Query: 244 LEELPVEVDKLLHLRYLDLSHT-ELKELPETMCNLLNLQTLKLNGCRSLSKLPQEIGKLD 420
           +EELP EV KL+HLRYL+LS    L+ELPET+C+L NLQTL +  C SL KLPQ +GKL 
Sbjct: 275 IEELPREVGKLIHLRYLNLSLCLSLRELPETICDLYNLQTLNIQVCESLQKLPQAMGKLI 334

Query: 421 NLRHLEIGGTDALHYLPQSIGRLCSLRTLSKFIA---GGEGCSIEELKLLNHLEGRLEIT 591
           NLRHLE G  D    LP+ IGRL SLRTL  FI    G + C I +L+ LN+L G L I 
Sbjct: 335 NLRHLENGFVDTREGLPKGIGRLSSLRTLDVFIVSSHGNDECQIGDLRNLNNLRGHLSIQ 394

Query: 592 VMEQVADVNKVEHAELKQKKNLR 660
            +++V D  + E AELK K +L+
Sbjct: 395 QLDKVKDAGEAEKAELKNKVHLQ 417


>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score =  137 bits (346), Expect = 1e-30
 Identities = 76/139 (54%), Positives = 96/139 (69%), Gaps = 4/139 (2%)
 Frame = +1

Query: 244  LEELPVEVDKLLHLRYLDLSHT-ELKELPETMCNLLNLQTLKLNGCRSLSKLPQEIGKLD 420
            +EELP EV KL+HLRYL+LS    L+ELPET+C+L NLQTL + GC SL KLPQ +GKL 
Sbjct: 594  IEELPKEVGKLIHLRYLNLSLCYRLRELPETICDLYNLQTLNIEGCSSLQKLPQAMGKLI 653

Query: 421  NLRHLEIGGTDALHYLPQSIGRLCSLRTLSKFIA---GGEGCSIEELKLLNHLEGRLEIT 591
            NLRHLE   T +L  LP+ IGRL SL+TL  FI    G + C I +L+ LN+L G L I 
Sbjct: 654  NLRHLENCNTGSLKGLPKGIGRLSSLQTLDVFIVSSHGNDECQIGDLRNLNNLRGGLSIQ 713

Query: 592  VMEQVADVNKVEHAELKQK 648
             +++V D  + E AELK +
Sbjct: 714  RLDEVKDAGEAEKAELKNR 732


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223542676|gb|EEF44213.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score =  136 bits (342), Expect = 4e-30
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)
 Frame = +1

Query: 28   MNGQEFSYIHGRHLSA---SNLENSSIYEQKNIRTLRPFHRDR-DLDREVLWNRTXXXXX 195
            ++G +  +   RHL+        + S+Y  +N+RTL    ++   +  ++   R+     
Sbjct: 527  ISGLDMLHTRTRHLTLIGPMEYFHPSVYNFRNLRTLLVLQKEMLTVPGDLFRIRSIPGDL 586

Query: 196  XXXXXXXXXXXXADGDLEELPVEVDKLLHLRYLDLSHTELKELPETMCNLLNLQTLKLNG 375
                        +   +  LP E+ KLLHLR+L+LS  +L+ELP T+ NL NLQTL L+ 
Sbjct: 587  FNCLTSLRGLDLSHTLITRLPSEIGKLLHLRWLNLSKLDLEELPNTLSNLYNLQTLNLDR 646

Query: 376  CRSLSKLPQEIGKLDNLRHLEIGGTDALHYLPQSIGRLCSLRTLSKFIA--GGEGCSIEE 549
            C+ L +LP  +GKL NLRHL +  TD L+  PQ I RL +LR L+KF+     EGC+I E
Sbjct: 647  CKRLQRLPGGLGKLKNLRHLNLRETDCLNIFPQGIERLSNLRMLTKFVVSENKEGCNIAE 706

Query: 550  LKLLNHLEGRLEITVMEQVADVNKVEHAELKQK 648
            LK L +L G LEI+ +E+V D +K + A+L  K
Sbjct: 707  LKNLKYLRGHLEISRLEKVVDTDKAKEADLTNK 739


Top