BLASTX nr result

ID: Cimicifuga21_contig00004553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004553
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38323.3| unnamed protein product [Vitis vinifera]              190   2e-48
emb|CBI38318.3| unnamed protein product [Vitis vinifera]              185   2e-48
ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis...   190   2e-48
ref|XP_004157667.1| PREDICTED: putative F-box protein PP2-B12-li...   187   4e-45
ref|XP_004138901.1| PREDICTED: F-box protein At2g02240-like [Cuc...   187   4e-45

>emb|CBI38323.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  190 bits (482), Expect(2) = 2e-48
 Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 14/212 (6%)
 Frame = -3

Query: 917 GVDISALPEGCI------TSPRDACSSSLVP------ADSDVVWEKFLPPYYRDILSTSL 774
           GVD SALPE CI      TS RDAC  S V       A+SD +WE FLP  YR+I+  S 
Sbjct: 51  GVDFSALPEDCIAGILARTSIRDACRMSTVSPEFLSAAESDALWETFLPADYREIIGRSS 110

Query: 773 SSFHVNDLS-RKELYFSLCDHPVLLAGGNKSFNLDKNSGKKCFMIGAKEISVIWGNSPQY 597
            S    D S +KEL+F LC+ P+L+ GG KSF LDK SGKKC+MI A+E+++IW  +P+Y
Sbjct: 111 ESSARQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCYMIAARELTIIWSETPRY 170

Query: 596 WKWISHPDSRFAEIAELKYVWWLELIGRIDTRMLSPNTTYAAFLVIKFANRNYGF-DGPT 420
           W WIS P SRF E+A LK VWW  + G+++T MLSP T YAA+L+ +  +   GF D P 
Sbjct: 171 WTWISPPQSRFTEVANLKIVWWFVIKGKMNTCMLSPCTNYAAYLIFQRNDIFDGFEDNPI 230

Query: 419 QVSVEFVGGEGRASGASTVYLDHERNRMPGPS 324
           + S+   GGE   +    +YLD E +  P P+
Sbjct: 231 ESSIGVTGGE---TAKKVIYLDPEHDISPNPT 259



 Score = 29.3 bits (64), Expect(2) = 2e-48
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = -1

Query: 214 VQMTLKEVDCNHPKAGLIVQGIELRPE 134
           ++M++ EV+    K+GL+++GIE+RP+
Sbjct: 282 LEMSIMEVNTFIGKSGLLIEGIEIRPK 308


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  185 bits (469), Expect(2) = 2e-48
 Identities = 104/224 (46%), Positives = 146/224 (65%), Gaps = 16/224 (7%)
 Frame = -3

Query: 917 GVDISALPEGCI------TSPRDACSSSLVP------ADSDVVWEKFLPPYYRDILS-TS 777
           G   S+LPEGCI      TSPRD C  S V       A+SD +WE+FLP  YR+I++ +S
Sbjct: 17  GHGFSSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSS 76

Query: 776 LSSFHVNDLSRKELYFSLCDHPVLLAGGNKSFNLDKNSGKKCFMIGAKEISVIWGNSPQY 597
            SS   +  S+KELYF+LCD+P+L+  G KSF L+K SGKKC+M+ ++E+++IWG++P Y
Sbjct: 77  ESSSWRHFSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGY 136

Query: 596 WKWISHPDSRFAEIAELKYVWWLELIGRIDTRMLSPNTTYAAFLVIKFANRNYGF-DGPT 420
           W+W S P+SRF E+A L+ V W E+ G+I+T MLSP T YAA+LV   A R++GF D P 
Sbjct: 137 WEWTSLPESRFPEVAYLQAVCWFEIRGKINTCMLSPRTNYAAYLVF-HAGRSHGFEDVPV 195

Query: 419 QVSVEFVGGEGRASGASTVYL-DHERNRMPGPS-NNHMPGPSNR 294
           + S+E VG E   +    +YL  + +N  P  S  + +P P  R
Sbjct: 196 ESSIEIVGNE---TTTRVIYLARYRKNEEPTSSIRSDLPYPKKR 236



 Score = 34.3 bits (77), Expect(2) = 2e-48
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -1

Query: 214 VQMTLKEVDCNHPKAGLIVQGIELRPE 134
           +++TL EV   H K GLIV+GIE+RP+
Sbjct: 258 LEITLMEVKAGHWKDGLIVEGIEIRPK 284


>ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis vinifera]
          Length = 277

 Score =  190 bits (482), Expect(2) = 2e-48
 Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 14/212 (6%)
 Frame = -3

Query: 917 GVDISALPEGCI------TSPRDACSSSLVP------ADSDVVWEKFLPPYYRDILSTSL 774
           GVD SALPE CI      TS RDAC  S V       A+SD +WE FLP  YR+I+  S 
Sbjct: 17  GVDFSALPEDCIAGILARTSIRDACRMSTVSPEFLSAAESDALWETFLPADYREIIGRSS 76

Query: 773 SSFHVNDLS-RKELYFSLCDHPVLLAGGNKSFNLDKNSGKKCFMIGAKEISVIWGNSPQY 597
            S    D S +KEL+F LC+ P+L+ GG KSF LDK SGKKC+MI A+E+++IW  +P+Y
Sbjct: 77  ESSARQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCYMIAARELTIIWSETPRY 136

Query: 596 WKWISHPDSRFAEIAELKYVWWLELIGRIDTRMLSPNTTYAAFLVIKFANRNYGF-DGPT 420
           W WIS P SRF E+A LK VWW  + G+++T MLSP T YAA+L+ +  +   GF D P 
Sbjct: 137 WTWISPPQSRFTEVANLKIVWWFVIKGKMNTCMLSPCTNYAAYLIFQRNDIFDGFEDNPI 196

Query: 419 QVSVEFVGGEGRASGASTVYLDHERNRMPGPS 324
           + S+   GGE   +    +YLD E +  P P+
Sbjct: 197 ESSIGVTGGE---TAKKVIYLDPEHDISPNPT 225



 Score = 29.3 bits (64), Expect(2) = 2e-48
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = -1

Query: 214 VQMTLKEVDCNHPKAGLIVQGIELRPE 134
           ++M++ EV+    K+GL+++GIE+RP+
Sbjct: 248 LEMSIMEVNTFIGKSGLLIEGIEIRPK 274


>ref|XP_004157667.1| PREDICTED: putative F-box protein PP2-B12-like [Cucumis sativus]
          Length = 268

 Score =  187 bits (474), Expect = 4e-45
 Identities = 100/207 (48%), Positives = 126/207 (60%), Gaps = 20/207 (9%)
 Frame = -3

Query: 914 VDISALPEGCI------TSPRDACSSSLVP------ADSDVVWEKFLPPYYRDILS---- 783
           +DI+ LP  C+      TSP+DAC S++        ADSD +W  FLP  YR I+S    
Sbjct: 1   MDINQLPAECLSSILAFTSPKDACRSAVASPAFRSAADSDALWITFLPSDYRQIISQASS 60

Query: 782 TSLSSFHVNDLSRKELYFSLCDHPVLLAGGNKSFNLDKNSGKKCFMIGAKEISVIWGNSP 603
           +S SSF +N LS+K LYF L DH + +  GN SF L+K SGKKC+MIGA+++ +IWGNSP
Sbjct: 61  SSTSSF-LNSLSKKALYFRLSDHLLFIGSGNSSFVLEKESGKKCYMIGARDLDIIWGNSP 119

Query: 602 QYWKWISHPDSRFAEIAELKYVWWLELIGRIDTRMLSPNTTYAAFLVIKFANRNYGFDG- 426
           QYW W S P SRF E+AEL+ VWWLE+ G+I+ R LSP T YAA+ V K     Y   G 
Sbjct: 120 QYWTWKSIPTSRFREVAELQVVWWLEIKGKIEARSLSPKTKYAAYFVFKLVEDRYSRRGF 179

Query: 425 ---PTQVSVEFVGGEGRASGASTVYLD 354
              P  + V F G E    G   V LD
Sbjct: 180 QIRPVSLEVHFEGAEVEEDGRKRVILD 206


>ref|XP_004138901.1| PREDICTED: F-box protein At2g02240-like [Cucumis sativus]
           gi|449477769|ref|XP_004155117.1| PREDICTED: F-box
           protein At2g02240-like [Cucumis sativus]
          Length = 322

 Score =  187 bits (474), Expect = 4e-45
 Identities = 97/200 (48%), Positives = 129/200 (64%), Gaps = 13/200 (6%)
 Frame = -3

Query: 914 VDISALPEGCI------TSPRDACSSSLVP------ADSDVVWEKFLPPYYRDILSTSLS 771
           +D SALPEGC+      TSP+D C S+ V       ADSD +W++FLPP Y D +S +LS
Sbjct: 18  LDFSALPEGCVSHILSFTSPQDVCRSASVSSTFRSAADSDALWDRFLPPDYADEISHALS 77

Query: 770 SFHVNDLSRKELYFSLCDHPVLLAGGNKSFNLDKNSGKKCFMIGAKEISVIWGNSPQYWK 591
                  S+K+LY  LC  PVL+ GG KSF+LDK +GKKC+MI  +++S++WG+ P+YW+
Sbjct: 78  HLFPPFSSKKQLYLHLCRFPVLIHGGAKSFSLDKKTGKKCYMISPRQLSIVWGDVPRYWR 137

Query: 590 WISHPDSRFAEIAELKYVWWLELIGRIDTRMLSPNTTYAAFLVIKFANRNYGF-DGPTQV 414
           W S P++RF E+AEL  V WLE+ G+I+T MLSP T Y+A LV K    +YGF   P +V
Sbjct: 138 WSSTPEARFGEVAELVSVCWLEIRGKIETEMLSPGTLYSAHLVFKPTTSSYGFQQQPVEV 197

Query: 413 SVEFVGGEGRASGASTVYLD 354
            V   G E       TVYLD
Sbjct: 198 GVGLTGTE---PVKRTVYLD 214


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