BLASTX nr result

ID: Cimicifuga21_contig00004546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004546
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21560.1| unknown [Picea sitchensis]                             166   3e-39
ref|XP_002285572.1| PREDICTED: uncharacterized protein LOC100252...   166   3e-39
pdb|1J03|A Chain A, Solution Structure Of A Putative Steroid-Bin...   165   6e-39
ref|NP_180066.1| putative steroid-binding protein 3 [Arabidopsis...   165   6e-39
gb|ABK23702.1| unknown [Picea sitchensis] gi|116785715|gb|ABK238...   164   8e-39

>gb|ABK21560.1| unknown [Picea sitchensis]
          Length = 101

 Score =  166 bits (420), Expect = 3e-39
 Identities = 78/101 (77%), Positives = 91/101 (90%)
 Frame = -1

Query: 465 LVMELTKQQLATYNGSDSSKPIYVAIKGRIFDVSTGNNFYGPGGSYSMFAGKDASRALGK 286
           + +E T+++L  YNGSDSSKPIYVAIKGR+FDVS+G NFYGPGGSY++FAGKDASRAL K
Sbjct: 1   MALEFTEEELLKYNGSDSSKPIYVAIKGRVFDVSSGKNFYGPGGSYAVFAGKDASRALAK 60

Query: 285 MSKNEEDVTDSLDGLSEKEMDVLNDWEKKFEAKYPIVGRVV 163
           MSKNEEDV+ SLDGL+EKE+ VL DWEKKFEAKY +VGRVV
Sbjct: 61  MSKNEEDVSASLDGLTEKEIGVLEDWEKKFEAKYSVVGRVV 101


>ref|XP_002285572.1| PREDICTED: uncharacterized protein LOC100252604 [Vitis vinifera]
           gi|147864286|emb|CAN83013.1| hypothetical protein
           VITISV_010105 [Vitis vinifera]
           gi|296082154|emb|CBI21159.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score =  166 bits (420), Expect = 3e-39
 Identities = 78/99 (78%), Positives = 89/99 (89%)
 Frame = -1

Query: 459 MELTKQQLATYNGSDSSKPIYVAIKGRIFDVSTGNNFYGPGGSYSMFAGKDASRALGKMS 280
           ME+T +QL  ++GSD SKPIYVA+KGRIFDV+TG +FYGPGGSY MFAGKDASRAL KMS
Sbjct: 1   MEVTAEQLKQFDGSDPSKPIYVAVKGRIFDVTTGKSFYGPGGSYCMFAGKDASRALAKMS 60

Query: 279 KNEEDVTDSLDGLSEKEMDVLNDWEKKFEAKYPIVGRVV 163
           KNEEDV+ SLDGLSEKEM VLNDWE KF+AKYP+VGRV+
Sbjct: 61  KNEEDVSPSLDGLSEKEMGVLNDWENKFQAKYPVVGRVI 99


>pdb|1J03|A Chain A, Solution Structure Of A Putative Steroid-Binding Protein
           From Arabidopsis
          Length = 102

 Score =  165 bits (417), Expect = 6e-39
 Identities = 77/99 (77%), Positives = 89/99 (89%)
 Frame = -1

Query: 459 MELTKQQLATYNGSDSSKPIYVAIKGRIFDVSTGNNFYGPGGSYSMFAGKDASRALGKMS 280
           ME T +QL+ YNG+D SKPIYVAIKGR+FDV+TG +FYG GG YSMFAGKDASRALGKMS
Sbjct: 3   MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMS 62

Query: 279 KNEEDVTDSLDGLSEKEMDVLNDWEKKFEAKYPIVGRVV 163
           KNEEDV+ SL+GL+EKE++ LNDWE KFEAKYP+VGRVV
Sbjct: 63  KNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 101


>ref|NP_180066.1| putative steroid-binding protein 3 [Arabidopsis thaliana]
           gi|62903498|sp|Q9SK39.1|SBP3_ARATH RecName:
           Full=Probable steroid-binding protein 3; Short=AtMP3
           gi|4559358|gb|AAD23019.1| putative steroid binding
           protein [Arabidopsis thaliana]
           gi|21536553|gb|AAM60885.1| putative steroid binding
           protein [Arabidopsis thaliana]
           gi|27311681|gb|AAO00806.1| putative steroid binding
           protein [Arabidopsis thaliana]
           gi|30725550|gb|AAP37797.1| At2g24940 [Arabidopsis
           thaliana] gi|330252546|gb|AEC07640.1| putative
           steroid-binding protein 3 [Arabidopsis thaliana]
          Length = 100

 Score =  165 bits (417), Expect = 6e-39
 Identities = 77/99 (77%), Positives = 89/99 (89%)
 Frame = -1

Query: 459 MELTKQQLATYNGSDSSKPIYVAIKGRIFDVSTGNNFYGPGGSYSMFAGKDASRALGKMS 280
           ME T +QL+ YNG+D SKPIYVAIKGR+FDV+TG +FYG GG YSMFAGKDASRALGKMS
Sbjct: 1   MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMS 60

Query: 279 KNEEDVTDSLDGLSEKEMDVLNDWEKKFEAKYPIVGRVV 163
           KNEEDV+ SL+GL+EKE++ LNDWE KFEAKYP+VGRVV
Sbjct: 61  KNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 99


>gb|ABK23702.1| unknown [Picea sitchensis] gi|116785715|gb|ABK23832.1| unknown
           [Picea sitchensis] gi|148910049|gb|ABR18108.1| unknown
           [Picea sitchensis]
          Length = 101

 Score =  164 bits (416), Expect = 8e-39
 Identities = 77/101 (76%), Positives = 89/101 (88%)
 Frame = -1

Query: 465 LVMELTKQQLATYNGSDSSKPIYVAIKGRIFDVSTGNNFYGPGGSYSMFAGKDASRALGK 286
           +  E T+++L  YNGSDSSKPIYVAIKGR+FDVS+G NFYGPG SY+MFAG+DASRAL K
Sbjct: 1   MATEFTEEELVKYNGSDSSKPIYVAIKGRVFDVSSGKNFYGPGESYAMFAGRDASRALAK 60

Query: 285 MSKNEEDVTDSLDGLSEKEMDVLNDWEKKFEAKYPIVGRVV 163
           MSKNEED+  SLDGL+EKE+ VL DWEKKFEAKYP+VGRVV
Sbjct: 61  MSKNEEDICASLDGLTEKEIGVLEDWEKKFEAKYPVVGRVV 101


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