BLASTX nr result

ID: Cimicifuga21_contig00004539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004539
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16189.3| unnamed protein product [Vitis vinifera]              140   3e-31
gb|AFK39083.1| unknown [Medicago truncatula]                          105   1e-20
ref|XP_003606618.1| MYB transcription factor [Medicago truncatul...   102   7e-20
ref|XP_003606617.1| MYB transcription factor [Medicago truncatul...   102   7e-20
ref|XP_003606616.1| MYB transcription factor [Medicago truncatul...   102   7e-20

>emb|CBI16189.3| unnamed protein product [Vitis vinifera]
          Length = 235

 Score =  140 bits (353), Expect = 3e-31
 Identities = 83/158 (52%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
 Frame = +1

Query: 1   RWSRIARKLPGRTDNEIKNYWRTHMRKKAQERKRXXXXXXXXXXXXXPDKNLSVDSSSMT 180
           RWSRIARKLPGRTDNEIKNYWRTHMRKKAQERKR             P  N S  +    
Sbjct: 82  RWSRIARKLPGRTDNEIKNYWRTHMRKKAQERKR-------AISPSSPSSNCSSSAPHNP 134

Query: 181 KIXXXXXXXXXXXXXXXXXYPMDRIWDEIASSEEVSSGLVYDTGCIEFEEGNSFSCP--P 354
           K                  Y MD IW +IA SEE +   VYD      EEG  F+CP  P
Sbjct: 135 KALAPTGKKTEEEKEADKGYSMDDIWKDIAFSEENTIKPVYDG---YKEEGCDFACPPNP 191

Query: 355 MASPLWDYCFDSLWSMDEEEEIKMLHPMSDPSAFNYGH 468
           MASP+WDYC DSLW MDEEE  KM  PMSD    +Y H
Sbjct: 192 MASPVWDYCPDSLWRMDEEES-KMFLPMSDQFISSYEH 228


>gb|AFK39083.1| unknown [Medicago truncatula]
          Length = 197

 Score =  105 bits (261), Expect = 1e-20
 Identities = 71/171 (41%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
 Frame = +1

Query: 1   RWSRIARKLPGRTDNEIKNYWRTHMRKK-AQERKRXXXXXXXXXXXXXPDKNLSVDSSSM 177
           RWSRIARKLPGRTDNEIKNYWRTHMRKK AQE+K              PD++ S  SS  
Sbjct: 6   RWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKH-----ATPSISSSPDQSSSCQSSHF 60

Query: 178 TK---------IXXXXXXXXXXXXXXXXXYPMDRIWDEIASSEEVSSGLVYDTGCIEFEE 330
           +                            Y MD IW +IA SE+  + L  D      E 
Sbjct: 61  SNSNHGVDSHASNKESEEENYQVQEIEQGYSMDDIWKDIAMSEDDINVLQPDFDGTSEEN 120

Query: 331 GNSFSCPPMAS-PLWDYCF-DSLWSMDEEEEIKMLHPMSDPSAFNYGHSRE 477
            N+ SCP M S   WDY + D LW MDEEE   +  P+ D     Y   RE
Sbjct: 121 SNNLSCPIMPSTSSWDYSYLDPLWVMDEEESKMLFPPIGDQYFSFYDQQRE 171


>ref|XP_003606618.1| MYB transcription factor [Medicago truncatula]
           gi|355507673|gb|AES88815.1| MYB transcription factor
           [Medicago truncatula]
          Length = 253

 Score =  102 bits (255), Expect = 7e-20
 Identities = 68/160 (42%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
 Frame = +1

Query: 1   RWSRIARKLPGRTDNEIKNYWRTHMRKK-AQERKRXXXXXXXXXXXXXPDKNLSVDSSSM 177
           RWSRIARKLPGRTDNEIKNYWRTHMRKK AQE+K              PD++ S  SS  
Sbjct: 83  RWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKH-----ATPSISSSPDQSSSCQSSHF 137

Query: 178 TK---------IXXXXXXXXXXXXXXXXXYPMDRIWDEIASSEEVSSGLVYDTGCIEFEE 330
           +                            Y MD IW +IA SE+  + L  D      E 
Sbjct: 138 SNSNHGVDSHASNKESEEENYQVQEIEQGYSMDDIWKDIAMSEDDINVLQPDFDGTSEEN 197

Query: 331 GNSFSCPPMAS-PLWDYCF-DSLWSMDEEEEIKMLHPMSD 444
            N+ SCP M S   WDY + D LW MDEEE   +  P+ D
Sbjct: 198 SNNLSCPIMPSTSSWDYSYLDPLWVMDEEESKMLFPPIGD 237


>ref|XP_003606617.1| MYB transcription factor [Medicago truncatula]
           gi|355507672|gb|AES88814.1| MYB transcription factor
           [Medicago truncatula]
          Length = 189

 Score =  102 bits (255), Expect = 7e-20
 Identities = 68/160 (42%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
 Frame = +1

Query: 1   RWSRIARKLPGRTDNEIKNYWRTHMRKK-AQERKRXXXXXXXXXXXXXPDKNLSVDSSSM 177
           RWSRIARKLPGRTDNEIKNYWRTHMRKK AQE+K              PD++ S  SS  
Sbjct: 19  RWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKH-----ATPSISSSPDQSSSCQSSHF 73

Query: 178 TK---------IXXXXXXXXXXXXXXXXXYPMDRIWDEIASSEEVSSGLVYDTGCIEFEE 330
           +                            Y MD IW +IA SE+  + L  D      E 
Sbjct: 74  SNSNHGVDSHASNKESEEENYQVQEIEQGYSMDDIWKDIAMSEDDINVLQPDFDGTSEEN 133

Query: 331 GNSFSCPPMAS-PLWDYCF-DSLWSMDEEEEIKMLHPMSD 444
            N+ SCP M S   WDY + D LW MDEEE   +  P+ D
Sbjct: 134 SNNLSCPIMPSTSSWDYSYLDPLWVMDEEESKMLFPPIGD 173


>ref|XP_003606616.1| MYB transcription factor [Medicago truncatula]
           gi|355507671|gb|AES88813.1| MYB transcription factor
           [Medicago truncatula]
          Length = 176

 Score =  102 bits (255), Expect = 7e-20
 Identities = 68/160 (42%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
 Frame = +1

Query: 1   RWSRIARKLPGRTDNEIKNYWRTHMRKK-AQERKRXXXXXXXXXXXXXPDKNLSVDSSSM 177
           RWSRIARKLPGRTDNEIKNYWRTHMRKK AQE+K              PD++ S  SS  
Sbjct: 6   RWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKH-----ATPSISSSPDQSSSCQSSHF 60

Query: 178 TK---------IXXXXXXXXXXXXXXXXXYPMDRIWDEIASSEEVSSGLVYDTGCIEFEE 330
           +                            Y MD IW +IA SE+  + L  D      E 
Sbjct: 61  SNSNHGVDSHASNKESEEENYQVQEIEQGYSMDDIWKDIAMSEDDINVLQPDFDGTSEEN 120

Query: 331 GNSFSCPPMAS-PLWDYCF-DSLWSMDEEEEIKMLHPMSD 444
            N+ SCP M S   WDY + D LW MDEEE   +  P+ D
Sbjct: 121 SNNLSCPIMPSTSSWDYSYLDPLWVMDEEESKMLFPPIGD 160


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