BLASTX nr result

ID: Cimicifuga21_contig00004533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004533
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544075.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   141   6e-32
ref|XP_003519402.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   141   6e-32
ref|XP_003616661.1| Clathrin heavy chain [Medicago truncatula] g...   139   2e-31
ref|XP_003538472.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   138   4e-31
ref|XP_002313985.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31

>ref|XP_003544075.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1700

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = +2

Query: 248 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 427
           MAAANAPITMKEALTLPSIGIN QFITFTHVTMESDKYICVRET+PQNSVVIIDM+MPNQ
Sbjct: 1   MAAANAPITMKEALTLPSIGINSQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQ 60

Query: 428 PLRRPITADSALM 466
           PLRRPITADSALM
Sbjct: 61  PLRRPITADSALM 73


>ref|XP_003519402.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1707

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = +2

Query: 248 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 427
           MAAANAPITMKEALTLPSIGIN QFITFTHVTMESDKYICVRET+PQNSVVIIDM+MPNQ
Sbjct: 1   MAAANAPITMKEALTLPSIGINSQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQ 60

Query: 428 PLRRPITADSALM 466
           PLRRPITADSALM
Sbjct: 61  PLRRPITADSALM 73


>ref|XP_003616661.1| Clathrin heavy chain [Medicago truncatula]
           gi|355517996|gb|AES99619.1| Clathrin heavy chain
           [Medicago truncatula]
          Length = 1706

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/73 (93%), Positives = 70/73 (95%)
 Frame = +2

Query: 248 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 427
           MAAANAPI MKE LTLPS+GIN QFITFTHVTMESDKYICVRETSPQNSVVI+DMSMPNQ
Sbjct: 1   MAAANAPIAMKEVLTLPSVGINAQFITFTHVTMESDKYICVRETSPQNSVVIVDMSMPNQ 60

Query: 428 PLRRPITADSALM 466
           PLRRPITADSALM
Sbjct: 61  PLRRPITADSALM 73


>ref|XP_003538472.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1700

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/73 (91%), Positives = 71/73 (97%)
 Frame = +2

Query: 248 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 427
           MAAANAPI M+E LTLP+IGINPQFITFTHVTMESDKYICVRET+PQNSVVIIDM+MPNQ
Sbjct: 1   MAAANAPIAMRETLTLPTIGINPQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQ 60

Query: 428 PLRRPITADSALM 466
           PLRRPITADSALM
Sbjct: 61  PLRRPITADSALM 73


>ref|XP_002313985.1| predicted protein [Populus trichocarpa] gi|222850393|gb|EEE87940.1|
           predicted protein [Populus trichocarpa]
          Length = 1690

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/73 (90%), Positives = 71/73 (97%)
 Frame = +2

Query: 248 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 427
           MAAANAPITMKEALTLPS+GINPQFI FTHVTMES+KYIC+RETSPQNSVVI+DM+MP Q
Sbjct: 1   MAAANAPITMKEALTLPSLGINPQFINFTHVTMESEKYICIRETSPQNSVVIVDMNMPMQ 60

Query: 428 PLRRPITADSALM 466
           PLRRPITADSALM
Sbjct: 61  PLRRPITADSALM 73


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